Guide Gene
- Gene ID
- Mapoly0097s0041
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR12661] PETER PAN-RELATED; [PTHR12661:SF5] SUBFAMILY NOT NAMED; [KOG2963] RNA-binding protein required for 60S ribosomal subunit biogenesis; [PF04427] Brix domain
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0097s0041 [PTHR12661] PETER PAN-RELATED; [PTHR12661:SF5] SUBFAMILY NOT NAMED; [KOG2963] RNA-binding protein required for 60S ribosomal subunit biogenesis; [PF04427] Brix domain 0.00 1.0000 1 Mapoly0002s0245 [K06961] ribosomal RNA assembly protein; [KOG2874] rRNA processing protein; [PTHR12581] HIV-1 REV BINDING PROTEIN 2, 3 1.00 0.9195 2 Mapoly0041s0093 [PF09368] Sas10 C-terminal domain; [PF04000] Sas10/Utp3/C1D family; [PTHR13237] SOMETHING ABOUT SILENCING PROTEIN 10-RELATED; [KOG3118] Disrupter of silencing SAS10 4.00 0.9114 3 Mapoly0074s0052 [KOG3237] Uncharacterized conserved protein; [PTHR12838] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11; [GO:0006364] rRNA processing; [GO:0032040] small-subunit processome; [PF03998] Utp11 protein 4.90 0.8973 4 Mapoly0122s0042 [KOG2885] Uncharacterized conserved protein; [PTHR14369] SURFEIT LOCUS PROTEIN 6; [PF04935] Surfeit locus protein 6; [PF15459] 60S ribosome biogenesis protein Rrp14; [PTHR14369:SF0] SUBFAMILY NOT NAMED 4.90 0.8925 5 Mapoly0099s0044 [PTHR13389] UNCHARACTERIZED 5.20 0.8973 6 Mapoly0115s0026 [KOG4134] DNA-dependent RNA polymerase I; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III 5.92 0.8970 7 Mapoly0001s0281 [PF03914] CBF/Mak21 family; [PTHR14428:SF5] SUBFAMILY NOT NAMED; [PF07540] Nucleolar complex-associated protein; [PTHR14428] NUCLEOLAR COMPLEX PROTEIN 3; [KOG2153] Protein involved in the nuclear export of pre-ribosomes 6.00 0.8829 8 Mapoly0031s0129 [K14561] U3 small nucleolar ribonucleoprotein protein IMP4; [KOG2781] U3 small nucleolar ribonucleoprotein (snoRNP) component; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain 6.63 0.8840 9 Mapoly0032s0043 [PF03725] 3' exoribonuclease family, domain 2; [PTHR11097:SF8] EXOSOME COMPLEX EXONUCLEASE RRP45 (POLYMYOSITIS/SCLERODERMA AUTOANTIGEN 1) (RIBOSOMAL RNA PROCESSING PROTEIN 45); [KOG1612] Exosomal 3'-5' exoribonuclease complex, subunit Rrp42; [PTHR11097] EXOSOME COMPLEX EXONUCLEASE (RIBOSOMAL RNA PROCESSING PROTEIN); [PF01138] 3' exoribonuclease family, domain 1; [K12589] exosome complex component RRP42 7.14 0.8298 10 Mapoly0148s0006 [PF07890] Rrp15p; [PTHR13245] FAMILY NOT NAMED 7.48 0.8947 11 Mapoly0121s0015 [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8.37 0.8886 12 Mapoly0029s0122 [PTHR15565:SF0] PROTEIN AATF (APOPTOSIS-ANTAGONIZING TRANSCRIPTION FACTOR); [PF13339] Apoptosis antagonizing transcription factor; [GO:0005634] nucleus; [KOG2773] Apoptosis antagonizing transcription factor/protein transport protein; [PTHR15565] AATF PROTEIN (APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR); [PF08164] Apoptosis-antagonizing transcription factor, C-terminal 8.49 0.8965 13 Mapoly0005s0264 [PF03725] 3' exoribonuclease family, domain 2; [PTHR11097] EXOSOME COMPLEX EXONUCLEASE (RIBOSOMAL RNA PROCESSING PROTEIN); [KOG1614] Exosomal 3'-5' exoribonuclease complex, subunit Rrp45; [PF01138] 3' exoribonuclease family, domain 1 8.83 0.8806 14 Mapoly0108s0017 [KOG2186] Cell growth-regulating nucleolar protein; [PF12874] Zinc-finger of C2H2 type; [PTHR13100] FAMILY NOT NAMED; [PF08790] LYAR-type C2HC zinc finger; [PTHR13100:SF10] SUBFAMILY NOT NAMED 9.17 0.8368 15 Mapoly0077s0037 [PTHR17039] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10; [PF04006] Mpp10 protein; [KOG2600] U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p; [K14559] U3 small nucleolar RNA-associated protein MPP10 10.39 0.8913 16 Mapoly0146s0011 [PTHR13387] FAMILY NOT NAMED; [PF04063] Domain of unknown function (DUF383); [KOG2973] Uncharacterized conserved protein; [PF04064] Domain of unknown function (DUF384) 11.87 0.8315 17 Mapoly0110s0002 [PTHR13296:SF0] SUBFAMILY NOT NAMED; [K12861] pre-mRNA-splicing factor SPF27; [KOG3096] Spliceosome-associated coiled-coil protein; [PTHR13296] BCAS2 PROTEIN; [GO:0006397] mRNA processing; [PF05700] Breast carcinoma amplified sequence 2 (BCAS2) 12.00 0.8714 18 Mapoly0160s0012 [PTHR10357] ALPHA-AMYLASE; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF02806] Alpha amylase, C-terminal all-beta domain; [GO:0003824] catalytic activity; [KOG0470] 1,4-alpha-glucan branching enzyme/starch branching enzyme II; [GO:0043169] cation binding; [PF00128] Alpha amylase, catalytic domain; [PF02922] Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12.45 0.8476 19 Mapoly0132s0039 [KOG2780] Ribosome biogenesis protein RPF1, contains IMP4 domain; [PTHR22734:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain 14.46 0.8590 20 Mapoly0020s0128 [PTHR12311] FAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG3152] TBP-binding protein, activator of basal transcription (contains rrm motif) 15.10 0.8432 21 Mapoly0014s0207 [PTHR14212] U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED; [GO:0046540] U4/U6 x U5 tri-snRNP complex; [K12843] U4/U6 small nuclear ribonucleoprotein PRP3; [GO:0000398] mRNA splicing, via spliceosome; [KOG2769] Putative u4/u6 small nuclear ribonucleoprotein; [PF06544] Protein of unknown function (DUF1115); [PF08572] pre-mRNA processing factor 3 (PRP3) 15.87 0.8506 22 Mapoly0009s0141 [PF05022] SRP40, C-terminal domain; [PTHR23216] NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1 15.91 0.8561 23 Mapoly0009s0198 [GO:0003723] RNA binding; [PTHR14911] FAMILY NOT NAMED; [PF02926] THUMP domain; [PF01170] Putative RNA methylase family UPF0020 16.25 0.8218 24 Mapoly0143s0027 [PTHR22851] U3 SMALL NUCLEOLAR RNA (U3 SNORNA) ASSOCIATED PROTEIN; [PTHR22851:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [KOG0268] Sof1-like rRNA processing protein (contains WD40 repeats); [K11806] WD repeat and SOF domain-containing protein 1; [PF04158] Sof1-like domain; [PF00400] WD domain, G-beta repeat 16.43 0.8507 25 Mapoly0009s0116 [PTHR12072] CWF19, CELL CYCLE CONTROL PROTEIN; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12072:SF4] SUBFAMILY NOT NAMED; [PF04677] Protein similar to CwfJ C-terminus 1; [GO:0046872] metal ion binding; [PF04676] Protein similar to CwfJ C-terminus 2 16.73 0.8193 26 Mapoly0050s0121 [KOG1416] tRNA(1-methyladenosine) methyltransferase, subunit GCD10; [GO:0003743] translation initiation factor activity; [PTHR12945] TRANSLATION INITIATION FACTOR EIF3-RELATED; [K03256] tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit; [GO:0006413] translational initiation; [PF04189] Gcd10p family 16.73 0.8579 27 Mapoly0006s0064 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF14392] Zinc knuckle; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding 18.25 0.8448 28 Mapoly0034s0108 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01189] NOL1/NOP2/sun family 18.71 0.8794 29 Mapoly0053s0094 [K07442] tRNA (adenine-N1-)-methyltransferase catalytic subunit [EC:2.1.1.36]; [GO:0031515] tRNA (m1A) methyltransferase complex; [GO:0030488] tRNA methylation; [PTHR12133] UNCHARACTERIZED METHYLTRANSFERASE; [PTHR12133:SF2] UNCHARACTERIZED METHYLTRANSFERASE; [2.1.1.36] Transferred entry: 2.1.1.217, 2.1.1.218, 2.1.1.219 and 2.1.1.220.; [PF08704] tRNA methyltransferase complex GCD14 subunit; [GO:0016429] tRNA (adenine-N1-)-methyltransferase activity; [KOG2915] tRNA(1-methyladenosine) methyltransferase, subunit GCD14 20.20 0.8462 30 Mapoly0012s0170 [GO:0005515] protein binding; [PTHR19865] U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2; [PTHR19865:SF0] SUBFAMILY NOT NAMED; [KOG0299] U3 snoRNP-associated protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat 20.86 0.8772 31 Mapoly0098s0050 [KOG3031] Protein required for biogenesis of the ribosomal 60S subunit; [PTHR12728] BRIX DOMAIN CONTAINING PROTEIN; [PTHR12728:SF0] SUBFAMILY NOT NAMED; [PF04427] Brix domain 22.05 0.8292 32 Mapoly0061s0104 [KOG3064] RNA-binding nuclear protein (MAK16) containing a distinct C4 Zn-finger; [PTHR23405:SF4] MAINTENANCE OF KILLER 16 (MAK16) PROTEIN; [PF01778] Ribosomal L28e protein family; [PF04874] Mak16 protein C-terminal region; [PTHR23405] MAINTENANCE OF KILLER 16 (MAK16) PROTEIN-RELATED 22.14 0.8455 33 Mapoly0057s0025 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG2553] Pseudouridylate synthase; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase. 25.00 0.8518 34 Mapoly0138s0022 [KOG2889] Predicted PRP38-like splicing factor; [PF03371] PRP38 family; [PTHR23142] UNCHARACTERIZED; [K12849] pre-mRNA-splicing factor 38A 25.30 0.8115 35 Mapoly0014s0202 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [PTHR11089:SF3] GTP-BINDING PROTEIN-RELATED PLANT/BACTERIA; [K13427] nitric-oxide synthase, plant [EC:1.14.13.39]; [1.14.13.39] Nitric-oxide synthase (NADPH dependent).; [GO:0005525] GTP binding 26.23 0.7366 36 Mapoly0006s0099 [PTHR13261] CDK INHIBITOR P21 BINDING PROTEIN; [KOG3034] Isoamyl acetate-hydrolyzing esterase and related enzymes; [PF13862] p21-C-terminal region-binding protein 26.46 0.8303 37 Mapoly0001s0498 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG0294] WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat 26.83 0.8485 38 Mapoly0043s0054 [PF03914] CBF/Mak21 family; [PTHR12455] NUCLEOLAR COMPLEX PROTEIN 4; [GO:0042254] ribosome biogenesis; [KOG2154] Predicted nucleolar protein involved in ribosome biogenesis; [PTHR12455:SF0] SUBFAMILY NOT NAMED 27.04 0.8711 39 Mapoly0032s0165 [PF12847] Methyltransferase domain; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [K11436] protein arginine N-methyltransferase 3 [EC:2.1.1.-]; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [GO:0006479] protein methylation; [KOG1499] Protein arginine N-methyltransferase PRMT1 and related enzymes 27.71 0.8539 40 Mapoly0069s0034 [K14564] nucleolar protein 56; [PF01798] Putative snoRNA binding domain; [PTHR10894:SF0] NUCLEOLAR PROTEIN 5 (NUCLEOLAR PROTEIN NOP5)(NOP58); [PF08060] NOSIC (NUC001) domain; [PF08156] NOP5NT (NUC127) domain; [KOG2573] Ribosome biogenesis protein - Nop56p/Sik1p; [PTHR10894] NUCLEOLAR PROTEIN 5 (NUCLEOLAR PROTEIN NOP5)(NOP58) 27.98 0.8485 41 Mapoly0009s0077 [PTHR14927:SF0] SUBFAMILY NOT NAMED; [KOG2321] WD40 repeat protein; [PTHR14927] UNCHARACTERIZED; [GO:0005634] nucleus; [PF08159] NUC153 domain 28.14 0.8564 42 Mapoly0004s0293 [GO:0005515] protein binding; [PTHR13889:SF2] WD-REPEAT PROTEIN 36 (T-CELL ACTIVATION WD REPEAT PROTEIN); [PTHR13889] PRE-MRNA SPLICING FACTOR PRP19-RELATED; [KOG1539] WD repeat protein; [GO:0006364] rRNA processing; [GO:0032040] small-subunit processome; [K14554] U3 small nucleolar RNA-associated protein 21; [PF04192] Utp21 specific WD40 associated putative domain; [PF00400] WD domain, G-beta repeat 30.59 0.8599 43 Mapoly0003s0305 [PF13481] AAA domain; [PF13662] Toprim domain; [GO:0003697] single-stranded DNA binding; [PTHR12873] T7-LIKE MITOCHONDRIAL DNA HELICASE; [KOG2373] Predicted mitochondrial DNA helicase twinkle; [GO:0043139] 5'-3' DNA helicase activity 32.45 0.7721 44 Mapoly0048s0058 [PTHR12821] BYSTIN; [KOG3871] Cell adhesion complex protein bystin; [PTHR12821:SF0] SUBFAMILY NOT NAMED; [PF05291] Bystin 32.50 0.8310 45 Mapoly0060s0046 [GO:0006396] RNA processing; [PTHR11246] PRE-MRNA SPLICING FACTOR; [KOG1915] Cell cycle control protein (crooked neck); [GO:0005515] protein binding; [PF13181] Tetratricopeptide repeat; [K12869] crooked neck; [GO:0005622] intracellular; [PF02184] HAT (Half-A-TPR) repeat; [PTHR11246:SF3] CROOKED NECK PROTEIN 32.50 0.8020 46 Mapoly0078s0006 [K14546] U3 small nucleolar RNA-associated protein 5; [GO:0005515] protein binding; [KOG4547] WD40 repeat-containing protein; [PTHR22847] WD40 REPEAT PROTEIN; [PF04003] Dip2/Utp12 Family; [PF00400] WD domain, G-beta repeat 33.17 0.8282 47 Mapoly0001s0129 [PTHR19858] WD40 REPEAT PROTEIN; [KOG0291] WD40-repeat-containing subunit of the 18S rRNA processing complex; [GO:0005515] protein binding; [PF04003] Dip2/Utp12 Family; [K14558] periodic tryptophan protein 2; [PF00400] WD domain, G-beta repeat 36.37 0.8570 48 Mapoly0025s0073 [PTHR17605] RIBOSOME BIOGENESIS PROTEIN BOP1 (BLOCK OF PROLIFERATION 1 PROTEIN); [GO:0005515] protein binding; [GO:0006364] rRNA processing; [KOG0650] WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis; [PF00400] WD domain, G-beta repeat; [PF08145] BOP1NT (NUC169) domain 36.88 0.8409 49 Mapoly0060s0020 [K14544] U3 small nucleolar RNA-associated protein 22; [KOG2054] Nucleolar RNA-associated protein (NRAP); [PTHR17972] NUCLEOLAR RNA-ASSOCIATED PROTEIN; [PF03813] Nrap protein 37.09 0.8470 50 Mapoly0113s0055 [KOG2155] Tubulin-tyrosine ligase-related protein; [PTHR12241] TUBULIN TYROSINE LIGASE-RELATED; [PF03133] Tubulin-tyrosine ligase family; [GO:0006464] cellular protein modification process; [PTHR12241:SF13] SUBFAMILY NOT NAMED 37.24 0.8173