Guide Gene
- Gene ID
- Mapoly0001s0129
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR19858] WD40 REPEAT PROTEIN; [KOG0291] WD40-repeat-containing subunit of the 18S rRNA processing complex; [GO:0005515] protein binding; [PF04003] Dip2/Utp12 Family; [K14558] periodic tryptophan protein 2; [PF00400] WD domain, G-beta repeat
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0001s0129 [PTHR19858] WD40 REPEAT PROTEIN; [KOG0291] WD40-repeat-containing subunit of the 18S rRNA processing complex; [GO:0005515] protein binding; [PF04003] Dip2/Utp12 Family; [K14558] periodic tryptophan protein 2; [PF00400] WD domain, G-beta repeat 0.00 1.0000 1 Mapoly0156s0021 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG1963] WD40 repeat protein; [PF00400] WD domain, G-beta repeat 1.00 0.9537 2 Mapoly0051s0055 [PTHR18359] WD-REPEAT PROTEIN-RELATED; [GO:0005515] protein binding; [KOG2055] WD40 repeat protein; [K14553] U3 small nucleolar RNA-associated protein 18; [PF00400] WD domain, G-beta repeat 2.00 0.9208 3 Mapoly0077s0037 [PTHR17039] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10; [PF04006] Mpp10 protein; [KOG2600] U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p; [K14559] U3 small nucleolar RNA-associated protein MPP10 2.65 0.9178 4 Mapoly0059s0092 [GO:0005524] ATP binding; [KOG2680] DNA helicase TIP49, TBP-interacting protein; [3.6.4.12] DNA helicase.; [PF06068] TIP49 C-terminus; [GO:0043141] ATP-dependent 5'-3' DNA helicase activity; [K11338] RuvB-like protein 2 [EC:3.6.4.12]; [GO:0003678] DNA helicase activity; [PTHR11093] RUVB-RELATED REPTIN AND PONTIN; [PTHR11093:SF2] RUVB-LIKE 2 (REPTIN) 2.83 0.9200 5 Mapoly0063s0055 [GO:0003677] DNA binding; [K03005] DNA-directed RNA polymerase I subunit RPA49; [GO:0005634] nucleus; [PTHR14440] FAMILY NOT NAMED; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.; [KOG4183] RNA polymerase I 49 kDa subunit; [PF06870] A49-like RNA polymerase I associated factor 3.61 0.9075 6 Mapoly0031s0153 [2.3.1.-] Transferring groups other than amino-acyl groups.; [PTHR10925] N-ACETYLTRANSFERASE 10; [GO:0008080] N-acetyltransferase activity; [K14521] N-acetyltransferase 10 [EC:2.3.1.-]; [PF13725] Possible tRNA binding domain; [PF13718] GNAT acetyltransferase 2; [PF05127] Helicase; [PF08351] Domain of unknown function (DUF1726); [KOG2036] Predicted P-loop ATPase fused to an acetyltransferase 4.00 0.9175 7 Mapoly0004s0090 [GO:0003677] DNA binding; [PF06883] RNA polymerase I, Rpa2 specific domain; [KOG0216] RNA polymerase I, second largest subunit; [PF04565] RNA polymerase Rpb2, domain 3; [PTHR20856] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [PF00562] RNA polymerase Rpb2, domain 6; [K03002] DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]; [GO:0032549] ribonucleoside binding; [GO:0005634] nucleus; [PF04561] RNA polymerase Rpb2, domain 2; [GO:0006351] transcription, DNA-dependent; [PTHR20856:SF5] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.; [PF04560] RNA polymerase Rpb2, domain 7; [PF04563] RNA polymerase beta subunit 4.24 0.9205 8 Mapoly0110s0002 [PTHR13296:SF0] SUBFAMILY NOT NAMED; [K12861] pre-mRNA-splicing factor SPF27; [KOG3096] Spliceosome-associated coiled-coil protein; [PTHR13296] BCAS2 PROTEIN; [GO:0006397] mRNA processing; [PF05700] Breast carcinoma amplified sequence 2 (BCAS2) 4.24 0.9004 9 Mapoly0050s0121 [KOG1416] tRNA(1-methyladenosine) methyltransferase, subunit GCD10; [GO:0003743] translation initiation factor activity; [PTHR12945] TRANSLATION INITIATION FACTOR EIF3-RELATED; [K03256] tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit; [GO:0006413] translational initiation; [PF04189] Gcd10p family 4.58 0.8933 10 Mapoly0093s0033 [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [PTHR22939:SF1] SERINE ENDOPEPTIDASE DEGP2; [PF13365] Trypsin-like peptidase domain 5.20 0.9107 11 Mapoly0004s0293 [GO:0005515] protein binding; [PTHR13889:SF2] WD-REPEAT PROTEIN 36 (T-CELL ACTIVATION WD REPEAT PROTEIN); [PTHR13889] PRE-MRNA SPLICING FACTOR PRP19-RELATED; [KOG1539] WD repeat protein; [GO:0006364] rRNA processing; [GO:0032040] small-subunit processome; [K14554] U3 small nucleolar RNA-associated protein 21; [PF04192] Utp21 specific WD40 associated putative domain; [PF00400] WD domain, G-beta repeat 5.48 0.9198 12 Mapoly0082s0024 [PF08149] BING4CT (NUC141) domain; [GO:0005515] protein binding; [KOG1272] WD40-repeat-containing subunit of the 18S rRNA processing complex; [PTHR14085] WD-REPEAT PROTEIN BING4; [PTHR14085:SF3] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat 6.32 0.8959 13 Mapoly0012s0170 [GO:0005515] protein binding; [PTHR19865] U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2; [PTHR19865:SF0] SUBFAMILY NOT NAMED; [KOG0299] U3 snoRNP-associated protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat 6.93 0.9193 14 Mapoly0001s0278 [PF03690] Uncharacterised protein family (UPF0160); [PTHR11215:SF0] SUBFAMILY NOT NAMED; [KOG2948] Predicted metal-binding protein; [PTHR11215] METAL DEPENDENT HYDROLASE - RELATED 7.48 0.8862 15 Mapoly0003s0297 [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0342] ATP-dependent RNA helicase pitchoune; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K13179] ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]; [PF13959] Domain of unknown function (DUF4217) 8.00 0.9012 16 Mapoly0119s0018 [PTHR12858] RIBOSOME BIOGENESIS PROTEIN; [PTHR12858:SF1] RIBOSOME BIOGENESIS PROTEIN TSR1 (20S RRNA ACCUMULATION PROTEIN 1); [GO:0042254] ribosome biogenesis; [GO:0005634] nucleus; [PF08142] AARP2CN (NUC121) domain; [KOG1980] Uncharacterized conserved protein; [PF04950] Protein of unknown function (DUF663) 8.12 0.9098 17 Mapoly0032s0165 [PF12847] Methyltransferase domain; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [K11436] protein arginine N-methyltransferase 3 [EC:2.1.1.-]; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [GO:0006479] protein methylation; [KOG1499] Protein arginine N-methyltransferase PRMT1 and related enzymes 8.37 0.9071 18 Mapoly0043s0054 [PF03914] CBF/Mak21 family; [PTHR12455] NUCLEOLAR COMPLEX PROTEIN 4; [GO:0042254] ribosome biogenesis; [KOG2154] Predicted nucleolar protein involved in ribosome biogenesis; [PTHR12455:SF0] SUBFAMILY NOT NAMED 9.49 0.9106 19 Mapoly0112s0008 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [PTHR12399] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7; [KOG2479] Translation initiation factor 3, subunit d (eIF-3d); [K03251] translation initiation factor eIF-3 subunit 7; [PF05091] Eukaryotic translation initiation factor 3 subunit 7 (eIF-3); [GO:0005852] eukaryotic translation initiation factor 3 complex 10.00 0.8658 20 Mapoly0144s0013 [KOG2434] RNA polymerase I transcription factor; [PF05327] RNA polymerase I specific transcription initiation factor RRN3; [PTHR12790] TRANSCRIPTION INITIATION FACTOR IA (RRN3) 10.20 0.8250 21 Mapoly0002s0051 [PF03205] Molybdopterin guanine dinucleotide synthesis protein B; [PTHR12755] CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P; [PF06807] Pre-mRNA cleavage complex II protein Clp1 10.39 0.8787 22 Mapoly0023s0025 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF14497] Glutathione S-transferase, C-terminal domain; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF03950] tRNA synthetases class I (E and Q), anti-codon binding domain; [KOG1147] Glutamyl-tRNA synthetase; [6.1.1.17] Glutamate--tRNA ligase.; [PTHR10119:SF15] GLUTAMINYL-TRNA SYNTHETASE; [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [GO:0006418] tRNA aminoacylation for protein translation; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]; [GO:0004812] aminoacyl-tRNA ligase activity 10.95 0.8742 23 Mapoly0034s0108 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01189] NOL1/NOP2/sun family 11.49 0.9083 24 Mapoly0031s0129 [K14561] U3 small nucleolar ribonucleoprotein protein IMP4; [KOG2781] U3 small nucleolar ribonucleoprotein (snoRNP) component; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain 12.45 0.8839 25 Mapoly0001s0498 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG0294] WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat 12.73 0.8865 26 Mapoly0041s0093 [PF09368] Sas10 C-terminal domain; [PF04000] Sas10/Utp3/C1D family; [PTHR13237] SOMETHING ABOUT SILENCING PROTEIN 10-RELATED; [KOG3118] Disrupter of silencing SAS10 12.85 0.9029 27 Mapoly0008s0107 [K12852] 116 kDa U5 small nuclear ribonucleoprotein component; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [PTHR23115:SF5] 116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT; [PF03764] Elongation factor G, domain IV; [KOG0468] U5 snRNP-specific protein; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 14.83 0.8707 28 Mapoly0165s0012 [PF08640] U3 small nucleolar RNA-associated protein 6; [KOG2396] HAT (Half-A-TPR) repeat-containing protein; [K14557] U3 small nucleolar RNA-associated protein 6; [PTHR23271] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66 14.97 0.8836 29 Mapoly0009s0077 [PTHR14927:SF0] SUBFAMILY NOT NAMED; [KOG2321] WD40 repeat protein; [PTHR14927] UNCHARACTERIZED; [GO:0005634] nucleus; [PF08159] NUC153 domain 15.43 0.9006 30 Mapoly0003s0246 [GO:0006396] RNA processing; [PF03725] 3' exoribonuclease family, domain 2; [GO:0003723] RNA binding; [K00962] polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]; [PTHR11252:SF0] SUBFAMILY NOT NAMED; [KOG1067] Predicted RNA-binding polyribonucleotide nucleotidyltransferase; [GO:0000175] 3'-5'-exoribonuclease activity; [PF00575] S1 RNA binding domain; [2.7.7.8] Polyribonucleotide nucleotidyltransferase.; [GO:0004654] polyribonucleotide nucleotidyltransferase activity; [PF00013] KH domain; [GO:0006402] mRNA catabolic process; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11252] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; [PF03726] Polyribonucleotide nucleotidyltransferase, RNA binding domain 16.25 0.8918 31 Mapoly0212s0005 [PTHR19855] WD40 REPEAT PROTEIN 12, 37; [GO:0005515] protein binding; [KOG0313] Microtubule binding protein YTM1 (contains WD40 repeats); [PF08154] NLE (NUC135) domain; [PF00400] WD domain, G-beta repeat 16.31 0.8995 32 Mapoly0037s0098 [KOG3089] Predicted DEAD-box-containing helicase; [PTHR24030] FAMILY NOT NAMED; [PF14617] U3-containing 90S pre-ribosomal complex subunit 17.75 0.8704 33 Mapoly0108s0040 [PF08167] rRNA processing/ribosome biogenesis 17.83 0.8641 34 Mapoly0084s0068 [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [K14298] mRNA export factor; [PTHR10971:SF11] MRNA EXPORT FACTOR; [PF00400] WD domain, G-beta repeat; [KOG0647] mRNA export protein (contains WD40 repeats) 18.44 0.8408 35 Mapoly0074s0052 [KOG3237] Uncharacterized conserved protein; [PTHR12838] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11; [GO:0006364] rRNA processing; [GO:0032040] small-subunit processome; [PF03998] Utp11 protein 19.21 0.8739 36 Mapoly0009s0019 [KOG1898] Splicing factor 3b, subunit 3; [PTHR10644:SF1] SPLICING FACTOR 3B SUBUNIT 3 (SPLICEOSOME-ASSOCIATED PROTEIN 130)(SAP 130); [PF10433] Mono-functional DNA-alkylating methyl methanesulfonate N-term; [PF03178] CPSF A subunit region; [GO:0005634] nucleus; [PTHR10644] DNA REPAIR/RNA PROCESSING CPSF FAMILY; [GO:0003676] nucleic acid binding; [K12830] splicing factor 3B subunit 3 19.60 0.8664 37 Mapoly0306s0002 [KOG1988] Uncharacterized conserved protein; [K13144] integrator complex subunit 7; [PTHR13322] C1ORF73 PROTEIN; [PTHR13322:SF2] SUBFAMILY NOT NAMED 19.70 0.8301 38 Mapoly0061s0134 [PTHR12687] NUCLEOLAR COMPLEX 2 AND RAD4-RELATED; [KOG2256] Predicted protein involved in nuclear export of pre-ribosomes; [PF03715] Noc2p family; [PTHR12687:SF4] YEAST NUCLEOLAR COMPLEX 2 19.75 0.8846 39 Mapoly0013s0047 [KOG2147] Nucleolar protein involved in 40S ribosome biogenesis; [PTHR23183:SF0] SUBFAMILY NOT NAMED; [PTHR23183] NOP14; [PF03715] Noc2p family; [GO:0032040] small-subunit processome; [PF04147] Nop14-like family 20.20 0.8896 40 Mapoly0097s0084 [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0948] Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily; [3.6.4.13] RNA helicase.; [K12598] ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF08148] DSHCT (NUC185) domain; [PF00271] Helicase conserved C-terminal domain; [PF13234] rRNA-processing arch domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 20.45 0.8762 41 Mapoly0014s0207 [PTHR14212] U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED; [GO:0046540] U4/U6 x U5 tri-snRNP complex; [K12843] U4/U6 small nuclear ribonucleoprotein PRP3; [GO:0000398] mRNA splicing, via spliceosome; [KOG2769] Putative u4/u6 small nuclear ribonucleoprotein; [PF06544] Protein of unknown function (DUF1115); [PF08572] pre-mRNA processing factor 3 (PRP3) 20.49 0.8581 42 Mapoly0169s0023 [PTHR16274] NUCLEOLAR PROTEIN 8; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) 20.49 0.8791 43 Mapoly0020s0155 [K00254] dihydroorotate dehydrogenase [EC:1.3.5.2]; [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [1.3.5.2] Dihydroorotate dehydrogenase (quinone).; [GO:0055114] oxidation-reduction process; [PF01180] Dihydroorotate dehydrogenase; [KOG1436] Dihydroorotate dehydrogenase; [GO:0004152] dihydroorotate dehydrogenase activity; [GO:0006222] UMP biosynthetic process 20.71 0.8757 44 Mapoly0029s0122 [PTHR15565:SF0] PROTEIN AATF (APOPTOSIS-ANTAGONIZING TRANSCRIPTION FACTOR); [PF13339] Apoptosis antagonizing transcription factor; [GO:0005634] nucleus; [KOG2773] Apoptosis antagonizing transcription factor/protein transport protein; [PTHR15565] AATF PROTEIN (APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR); [PF08164] Apoptosis-antagonizing transcription factor, C-terminal 20.90 0.8906 45 Mapoly0063s0069 [PTHR32379] FAMILY NOT NAMED; [KOG1709] Guanidinoacetate methyltransferase and related proteins; [PF12796] Ankyrin repeats (3 copies) 22.14 0.8663 46 Mapoly0060s0020 [K14544] U3 small nucleolar RNA-associated protein 22; [KOG2054] Nucleolar RNA-associated protein (NRAP); [PTHR17972] NUCLEOLAR RNA-ASSOCIATED PROTEIN; [PF03813] Nrap protein 22.25 0.8831 47 Mapoly0069s0022 [PF04097] Nup93/Nic96; [GO:0005643] nuclear pore; [KOG2168] Cullins; [PTHR11225] NUCLEAR PORE COMPLEX PROTEIN NUP93 (NUCLEOPORIN NUP93) (DEAD EYE PROTEIN); [K14309] nuclear pore complex protein Nup93; [GO:0006810] transport 22.45 0.8611 48 Mapoly0153s0027 [PTHR22889] UNCHARACTERIZED; [KOG1188] WD40 repeat protein; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat 23.37 0.8442 49 Mapoly0136s0021 [PTHR13213] DNA POLYMERASE V RELATED; [GO:0003677] DNA binding; [PF04931] DNA polymerase phi; [2.7.7.7] DNA-directed DNA polymerase.; [PTHR13213:SF2] DNA POLYMERASE V; [GO:0006351] transcription, DNA-dependent; [GO:0003887] DNA-directed DNA polymerase activity; [K02331] DNA polymerase phi subunit [EC:2.7.7.7] 24.08 0.8851 50 Mapoly0108s0039 [GO:0001522] pseudouridine synthesis; [GO:0042254] ribosome biogenesis; [PTHR31633] FAMILY NOT NAMED; [PF04410] Gar1/Naf1 RNA binding region 24.49 0.8480