Guide Gene

Gene ID
Mapoly0082s0024
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF08149] BING4CT (NUC141) domain; [GO:0005515] protein binding; [KOG1272] WD40-repeat-containing subunit of the 18S rRNA processing complex; [PTHR14085] WD-REPEAT PROTEIN BING4; [PTHR14085:SF3] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat

Coexpressed Gene List

Search : Show :

Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0082s0024 [PF08149] BING4CT (NUC141) domain; [GO:0005515] protein binding; [KOG1272] WD40-repeat-containing subunit of the 18S rRNA processing complex; [PTHR14085] WD-REPEAT PROTEIN BING4; [PTHR14085:SF3] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat 0.00 1.0000
1 Mapoly0059s0092 [GO:0005524] ATP binding; [KOG2680] DNA helicase TIP49, TBP-interacting protein; [3.6.4.12] DNA helicase.; [PF06068] TIP49 C-terminus; [GO:0043141] ATP-dependent 5'-3' DNA helicase activity; [K11338] RuvB-like protein 2 [EC:3.6.4.12]; [GO:0003678] DNA helicase activity; [PTHR11093] RUVB-RELATED REPTIN AND PONTIN; [PTHR11093:SF2] RUVB-LIKE 2 (REPTIN)3.000.9039
2 Mapoly0006s0185 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED5.290.8792
3 Mapoly0001s0498 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG0294] WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat5.920.8829
4 Mapoly0001s0129 [PTHR19858] WD40 REPEAT PROTEIN; [KOG0291] WD40-repeat-containing subunit of the 18S rRNA processing complex; [GO:0005515] protein binding; [PF04003] Dip2/Utp12 Family; [K14558] periodic tryptophan protein 2; [PF00400] WD domain, G-beta repeat6.320.8959
5 Mapoly0212s0005 [PTHR19855] WD40 REPEAT PROTEIN 12, 37; [GO:0005515] protein binding; [KOG0313] Microtubule binding protein YTM1 (contains WD40 repeats); [PF08154] NLE (NUC135) domain; [PF00400] WD domain, G-beta repeat7.350.8936
6 Mapoly0012s0170 [GO:0005515] protein binding; [PTHR19865] U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2; [PTHR19865:SF0] SUBFAMILY NOT NAMED; [KOG0299] U3 snoRNP-associated protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat8.940.8846
7 Mapoly0057s0032 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [PTHR22807:SF4] WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN 20; [PF01189] NOL1/NOP2/sun family; [KOG2360] Proliferation-associated nucleolar protein (NOL1)8.940.8730
8 Mapoly0004s0293 [GO:0005515] protein binding; [PTHR13889:SF2] WD-REPEAT PROTEIN 36 (T-CELL ACTIVATION WD REPEAT PROTEIN); [PTHR13889] PRE-MRNA SPLICING FACTOR PRP19-RELATED; [KOG1539] WD repeat protein; [GO:0006364] rRNA processing; [GO:0032040] small-subunit processome; [K14554] U3 small nucleolar RNA-associated protein 21; [PF04192] Utp21 specific WD40 associated putative domain; [PF00400] WD domain, G-beta repeat12.250.8802
9 Mapoly0051s0055 [PTHR18359] WD-REPEAT PROTEIN-RELATED; [GO:0005515] protein binding; [KOG2055] WD40 repeat protein; [K14553] U3 small nucleolar RNA-associated protein 18; [PF00400] WD domain, G-beta repeat12.960.8782
10 Mapoly0037s0098 [KOG3089] Predicted DEAD-box-containing helicase; [PTHR24030] FAMILY NOT NAMED; [PF14617] U3-containing 90S pre-ribosomal complex subunit13.670.8616
11 Mapoly0063s0055 [GO:0003677] DNA binding; [K03005] DNA-directed RNA polymerase I subunit RPA49; [GO:0005634] nucleus; [PTHR14440] FAMILY NOT NAMED; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.; [KOG4183] RNA polymerase I 49 kDa subunit; [PF06870] A49-like RNA polymerase I associated factor15.490.8659
12 Mapoly0066s0060 [GO:0005515] protein binding; [GO:0005730] nucleolus; [KOG0310] Conserved WD40 repeat-containing protein; [PF09384] UTP15 C terminal; [GO:0006364] rRNA processing; [K14549] U3 small nucleolar RNA-associated protein 15; [PTHR19924] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat18.470.8709
13 Mapoly0001s0278 [PF03690] Uncharacterised protein family (UPF0160); [PTHR11215:SF0] SUBFAMILY NOT NAMED; [KOG2948] Predicted metal-binding protein; [PTHR11215] METAL DEPENDENT HYDROLASE - RELATED18.570.8504
14 Mapoly0093s0033 [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [PTHR22939:SF1] SERINE ENDOPEPTIDASE DEGP2; [PF13365] Trypsin-like peptidase domain19.080.8682
15 Mapoly0156s0021 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG1963] WD40 repeat protein; [PF00400] WD domain, G-beta repeat19.670.8760
16 Mapoly0097s0057 [GO:0005515] protein binding; [PTHR10588] FAMILY NOT NAMED; [PF00560] Leucine Rich Repeat; [KOG1644] U2-associated snRNP A' protein; [PF12799] Leucine Rich repeats (2 copies)19.900.8507
17 Mapoly0041s0094 [3.1.26.5] Ribonuclease P.; [PTHR13031] RIBONUCLEASE P-RELATED; [K03539] ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]; [KOG2363] Protein subunit of nuclear ribonuclease P (RNase P); [GO:0008033] tRNA processing; [PF01876] RNase P subunit p30; [GO:0004540] ribonuclease activity21.790.8565
18 Mapoly0044s0007 [KOG2971] RNA-binding protein required for biogenesis of the ribosomal 60S subunit; [PTHR13634] RIBOSOME BIOGENESIS PROTEIN BRIX; [PF04427] Brix domain21.910.8380
19 Mapoly0043s0054 [PF03914] CBF/Mak21 family; [PTHR12455] NUCLEOLAR COMPLEX PROTEIN 4; [GO:0042254] ribosome biogenesis; [KOG2154] Predicted nucleolar protein involved in ribosome biogenesis; [PTHR12455:SF0] SUBFAMILY NOT NAMED22.980.8704
20 Mapoly0031s0129 [K14561] U3 small nucleolar ribonucleoprotein protein IMP4; [KOG2781] U3 small nucleolar ribonucleoprotein (snoRNP) component; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain24.490.8537
21 Mapoly0115s0026 [KOG4134] DNA-dependent RNA polymerase I; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III24.740.8586
22 Mapoly0064s0065 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [PTHR13946:SF16] DNA-DIRECTED RNA POLYMERASE II 13.3 KDA POLYPEPTIDE; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG3438] DNA-directed RNA polymerase, subunit L; [2.7.7.6] DNA-directed RNA polymerase.; [K03020] DNA-directed RNA polymerases I and III subunit RPAC225.880.8109
23 Mapoly0165s0019 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [KOG0337] ATP-dependent RNA helicase; [PF08147] DBP10CT (NUC160) domain; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF71] SUBFAMILY NOT NAMED; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides26.740.8689
24 Mapoly0001s0313 [PF01597] Glycine cleavage H-protein; [PTHR13651] UNCHARACTERIZED; [KOG3266] Predicted glycine cleavage system H protein; [PTHR13651:SF0] SUBFAMILY NOT NAMED26.940.8117
25 Mapoly0027s0127 [PTHR22841:SF4] GB DEF: MKIAA1988 PROTEIN (FRAGMENT); [GO:0005515] protein binding; [PTHR22841] FAMILY NOT NAMED; [K14548] U3 small nucleolar RNA-associated protein 4; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat29.390.8645
26 Mapoly0028s0021 -31.180.8333
27 Mapoly0001s0280 [GO:0005524] ATP binding; [KOG0340] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding31.940.8367
28 Mapoly0116s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [PTHR24031:SF78] SUBFAMILY NOT NAMED; [3.6.1.-] In phosphorous-containing anhydrides.; [KOG0330] ATP-dependent RNA helicase32.080.8534
29 Mapoly0009s0077 [PTHR14927:SF0] SUBFAMILY NOT NAMED; [KOG2321] WD40 repeat protein; [PTHR14927] UNCHARACTERIZED; [GO:0005634] nucleus; [PF08159] NUC153 domain32.120.8490
30 Mapoly0090s0067 [GO:0005515] protein binding; [KOG0302] Ribosome Assembly protein; [PTHR22850] WD40 REPEAT FAMILY; [PF12265] Histone-binding protein RBBP4 or subunit C of CAF1 complex; [PTHR22850:SF6] GLUTAMATE RICH WD REPEAT PROTEIN (GRWD); [PF00400] WD domain, G-beta repeat32.910.8160
31 Mapoly0031s0027 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31426] FAMILY NOT NAMED33.470.8306
32 Mapoly0032s0165 [PF12847] Methyltransferase domain; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [K11436] protein arginine N-methyltransferase 3 [EC:2.1.1.-]; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [GO:0006479] protein methylation; [KOG1499] Protein arginine N-methyltransferase PRMT1 and related enzymes33.670.8457
33 Mapoly0059s0089 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR11472:SF1] DNA REPAIR HELICASE RAD3/XP-D; [KOG1131] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 5'-3' helicase subunit RAD3; [PF06777] Protein of unknown function (DUF1227); [GO:0008026] ATP-dependent helicase activity; [K10844] DNA excision repair protein ERCC-2 [EC:3.6.4.12]; [GO:0016787] hydrolase activity; [PF04851] Type III restriction enzyme, res subunit; [PF13307] Helicase C-terminal domain; [3.6.4.12] DNA helicase.; [PF06733] DEAD_2; [GO:0005634] nucleus; [PTHR11472] DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides34.870.8323
34 Mapoly0002s0051 [PF03205] Molybdopterin guanine dinucleotide synthesis protein B; [PTHR12755] CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P; [PF06807] Pre-mRNA cleavage complex II protein Clp135.330.8313
35 Mapoly0090s0014 [GO:0008168] methyltransferase activity; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [GO:0006479] protein methylation; [PTHR11006:SF21] PREDICTED: HYPOTHETICAL PROTEIN; [KOG1499] Protein arginine N-methyltransferase PRMT1 and related enzymes; [PF05185] PRMT5 arginine-N-methyltransferase35.690.7867
36 Mapoly0052s0036 [GO:0005524] ATP binding; [PTHR10593:SF1] SERINE/THREONINE-PROTEIN KINASE RIO2 (RIO KINASE 2); [KOG2268] Serine/threonine protein kinase; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF01163] RIO1 family; [GO:0006468] protein phosphorylation; [GO:0003824] catalytic activity; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [PF09202] Rio2, N-terminal; [K07179] RIO kinase 2 [EC:2.7.11.1]; [GO:0004674] protein serine/threonine kinase activity37.750.8463
37 Mapoly0005s0193 [PF00206] Lyase; [PF14698] Argininosuccinate lyase C-terminal; [4.3.2.1] Argininosuccinate lyase.; [KOG1316] Argininosuccinate lyase; [GO:0004056] argininosuccinate lyase activity; [PTHR11444:SF3] ARGININOSUCCINATE LYASE; [PTHR11444] ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE; [GO:0042450] arginine biosynthetic process via ornithine; [K01755] argininosuccinate lyase [EC:4.3.2.1]37.820.8186
38 Mapoly0034s0108 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01189] NOL1/NOP2/sun family37.820.8459
39 Mapoly0020s0155 [K00254] dihydroorotate dehydrogenase [EC:1.3.5.2]; [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [1.3.5.2] Dihydroorotate dehydrogenase (quinone).; [GO:0055114] oxidation-reduction process; [PF01180] Dihydroorotate dehydrogenase; [KOG1436] Dihydroorotate dehydrogenase; [GO:0004152] dihydroorotate dehydrogenase activity; [GO:0006222] UMP biosynthetic process39.120.8418
40 Mapoly0125s0002 [PF01926] 50S ribosome-binding GTPase; [KOG2486] Predicted GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [GO:0005525] GTP binding39.420.8323
41 Mapoly0074s0052 [KOG3237] Uncharacterized conserved protein; [PTHR12838] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11; [GO:0006364] rRNA processing; [GO:0032040] small-subunit processome; [PF03998] Utp11 protein40.560.8340
42 Mapoly0063s0069 [PTHR32379] FAMILY NOT NAMED; [KOG1709] Guanidinoacetate methyltransferase and related proteins; [PF12796] Ankyrin repeats (3 copies)41.810.8239
43 Mapoly0122s0018 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [KOG2423] Nucleolar GTPase; [PF01926] 50S ribosome-binding GTPase; [GO:0005730] nucleolus; [PF08153] NGP1NT (NUC091) domain; [K14537] nuclear GTP-binding protein; [GO:0005525] GTP binding; [PTHR11089:SF9] GTP-BINDING PROTEIN 244.000.8267
44 Mapoly0143s0034 [PTHR20922] UNCHARACTERIZED; [GO:0008270] zinc ion binding; [PTHR20922:SF13] UNCHARACTERIZED; [PF05180] DNL zinc finger44.280.8191
45 Mapoly0079s0016 [GO:0005515] protein binding; [KOG3881] Uncharacterized conserved protein; [PTHR16038] NOP SEVEN ASSOCIATED PROTEIN 1; [PTHR16038:SF4] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat45.320.8014
46 Mapoly0029s0122 [PTHR15565:SF0] PROTEIN AATF (APOPTOSIS-ANTAGONIZING TRANSCRIPTION FACTOR); [PF13339] Apoptosis antagonizing transcription factor; [GO:0005634] nucleus; [KOG2773] Apoptosis antagonizing transcription factor/protein transport protein; [PTHR15565] AATF PROTEIN (APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR); [PF08164] Apoptosis-antagonizing transcription factor, C-terminal45.380.8436
47 Mapoly0006s0193 [PTHR13370:SF3] gb def: expressed protein [arabidopsis thaliana]; [KOG2671] Putative RNA methylase; [PTHR13370] RNA METHYLASE-RELATED; [PF01170] Putative RNA methylase family UPF002045.600.8135
48 Mapoly0076s0025 [GO:0005524] ATP binding; [KOG0328] Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF33] ATP-DEPENDENT RNA HELICASE46.580.8401
49 Mapoly0077s0037 [PTHR17039] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10; [PF04006] Mpp10 protein; [KOG2600] U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p; [K14559] U3 small nucleolar RNA-associated protein MPP1046.670.8377
50 Mapoly0004s0090 [GO:0003677] DNA binding; [PF06883] RNA polymerase I, Rpa2 specific domain; [KOG0216] RNA polymerase I, second largest subunit; [PF04565] RNA polymerase Rpb2, domain 3; [PTHR20856] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [PF00562] RNA polymerase Rpb2, domain 6; [K03002] DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]; [GO:0032549] ribonucleoside binding; [GO:0005634] nucleus; [PF04561] RNA polymerase Rpb2, domain 2; [GO:0006351] transcription, DNA-dependent; [PTHR20856:SF5] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.; [PF04560] RNA polymerase Rpb2, domain 7; [PF04563] RNA polymerase beta subunit46.730.8441
Showing 1 to 50 of 200 records
S