Guide Gene
- Gene ID
- Mapoly0065s0031
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0042393] histone binding; [PF12165] Domain of unknown function (DUF3594); [GO:0006355] regulation of transcription, DNA-dependent; [PTHR12321] CPG BINDING PROTEIN
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0065s0031 [GO:0042393] histone binding; [PF12165] Domain of unknown function (DUF3594); [GO:0006355] regulation of transcription, DNA-dependent; [PTHR12321] CPG BINDING PROTEIN 0.00 1.0000 1 Mapoly0063s0065 [PTHR23177:SF1] MKIAA1688 PROTEIN; [PTHR23177] MKIAA1688 PROTEIN; [PF00784] MyTH4 domain; [GO:0005856] cytoskeleton 1.41 0.7464 2 Mapoly0046s0068 [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding 2.00 0.7923 3 Mapoly0001s0452 [KOG0798] Uncharacterized conserved protein; [PTHR13395:SF6] SUBFAMILY NOT NAMED; [PF09724] Uncharacterized conserved protein (DUF2036); [K11271] sister chromatid cohesion protein DCC1; [PTHR13395] SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 6.48 0.7135 4 Mapoly0096s0048 [GO:0030915] Smc5-Smc6 complex; [PTHR21330] UNCHARACTERIZED; [GO:0019789] SUMO ligase activity; [PF11789] Zinc-finger of the MIZ type in Nse subunit; [GO:0000724] double-strand break repair via homologous recombination 7.07 0.7266 5 Mapoly0080s0073 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [GO:0046872] metal ion binding; [PF10354] Domain of unknown function (DUF2431) 8.72 0.7268 6 Mapoly0170s0031 - 10.49 0.7049 7 Mapoly0004s0008 - 10.54 0.7296 8 Mapoly0054s0012 - 16.43 0.6631 9 Mapoly0033s0019 [PTHR13903] PIRIN-RELATED; [K06911] MFS transporter, UMF1 family; [PF02678] Pirin; [PF05726] Pirin C-terminal cupin domain 17.49 0.7090 10 Mapoly0092s0014 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain 18.55 0.7100 11 Mapoly0162s0020 - 25.92 0.6607 12 Mapoly0127s0049 [K04649] ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:6.3.2.19]; [GO:0005515] protein binding; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0418] Ubiquitin-protein ligase; [PF00627] UBA/TS-N domain; [PTHR24067:SF29] UBIQUITIN-CONJUGATING ENZYME E2 K; [PF00179] Ubiquitin-conjugating enzyme 26.53 0.6835 13 Mapoly0058s0033 [PTHR20383] FAMILY NOT NAMED; [KOG2424] Protein involved in transcription start site selection; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF04722] Ssu72-like protein 28.72 0.7037 14 Mapoly0001s0064 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0008173] RNA methyltransferase activity; [PTHR12029] RNA METHYLTRANSFERASE; [KOG0838] RNA Methylase, SpoU family; [PF00588] SpoU rRNA Methylase family 30.30 0.7211 15 Mapoly0030s0111 - 30.66 0.5716 16 Mapoly0014s0194 [PTHR15722:SF2] WIMPLE/IFT172; [PTHR15722] IFT140/172-RELATED; [KOG3616] Selective LIM binding factor 31.02 0.6934 17 Mapoly0037s0142 - 34.28 0.6642 18 Mapoly0109s0020 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger) 34.50 0.6832 19 Mapoly0060s0102 [PTHR12327:SF0] SUBFAMILY NOT NAMED; [PTHR12327] UNCHARACTERIZED; [GO:0071929] alpha-tubulin acetylation; [GO:0019799] tubulin N-acetyltransferase activity; [KOG4601] Uncharacterized conserved protein; [PF05301] Touch receptor neuron protein Mec-17 35.67 0.6432 20 Mapoly0051s0089 [GO:0003677] DNA binding; [K03013] DNA-directed RNA polymerases I, II, and III subunit RPABC1; [PF03871] RNA polymerase Rpb5, N-terminal domain; [PTHR10535] FAMILY NOT NAMED; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF01191] RNA polymerase Rpb5, C-terminal domain; [GO:0003899] DNA-directed RNA polymerase activity; [KOG3218] RNA polymerase, 25-kDa subunit (common to polymerases I, II and III) 38.39 0.6713 21 Mapoly0033s0143 [K03127] transcription initiation factor TFIID subunit 13; [KOG3901] Transcription initiation factor IID subunit; [PF02269] Transcription initiation factor IID, 18kD subunit; [GO:0006366] transcription from RNA polymerase II promoter; [PTHR11380] TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED 41.71 0.6756 22 Mapoly0097s0033 [PTHR10870] CELL CYCLE CHECKPOINT PROTEIN RAD1; [KOG3194] Checkpoint 9-1-1 complex, RAD1 component; [PF02144] Repair protein Rad1/Rec1/Rad17; [GO:0005634] nucleus; [K02830] cell cycle checkpoint protein [EC:3.1.11.2]; [GO:0006281] DNA repair; [3.1.11.2] Exodeoxyribonuclease III. 42.08 0.6661 23 Mapoly0127s0022 [GO:0003950] NAD+ ADP-ribosyltransferase activity; [PTHR21328] POLY (ADP-RIBOSE) POLYMERASE FAMILY, MEMBER (PARP); [PF00644] Poly(ADP-ribose) polymerase catalytic domain 42.51 0.5916 24 Mapoly0009s0203 - 42.60 0.6849 25 Mapoly0111s0006 - 44.19 0.6343 26 Mapoly0020s0061 [PTHR12621] CYSTEINE AND HISTIDINE-RICH DOMAIN (CHORD)-CONTAINING PROTEIN; [PF04968] CHORD; [K13458] disease resistance protein 46.13 0.6251 27 Mapoly0029s0049 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016602] CCAAT-binding factor complex; [KOG1657] CCAAT-binding factor, subunit C (HAP5); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR10252:SF8] TRANSCRIPTIONAL ACTIVATOR HAP5; [GO:0005622] intracellular; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 46.35 0.7017 28 Mapoly0166s0006 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 4 47.33 0.6917 29 Mapoly0161s0021 [K11805] WD repeat-containing protein 68; [GO:0005515] protein binding; [KOG0290] Conserved WD40 repeat-containing protein AN11; [PTHR19919] WD REPEAT CONTAINING PROTEIN; [PF00400] WD domain, G-beta repeat 49.78 0.6717 30 Mapoly0076s0002 [PTHR14854] NIF3L1BP1 PROTEIN-RELATED; [KOG3215] Uncharacterized conserved protein; [GO:0000445] THO complex part of transcription export complex; [GO:0006397] mRNA processing; [K13176] THO complex subunit 7; [PF05615] Tho complex subunit 7 49.80 0.6608 31 Mapoly0035s0021 [PF12780] P-loop containing dynein motor region D4; [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12775] P-loop containing dynein motor region D3; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF12781] ATP-binding dynein motor region D5; [PF08393] Dynein heavy chain, N-terminal region 2; [GO:0003777] microtubule motor activity 53.44 0.6418 32 Mapoly0138s0027 [PTHR14845] FAMILY NOT NAMED; [GO:0036064] cilium basal body; [PTHR14845:SF0] SUBFAMILY NOT NAMED 53.99 0.6419 33 Mapoly0114s0002 [PF03168] Late embryogenesis abundant protein; [PTHR31852] FAMILY NOT NAMED 54.00 0.6783 34 Mapoly0019s0098 [PF13345] Domain of unknown function (DUF4098) 54.86 0.6471 35 Mapoly0045s0058 - 55.14 0.5819 36 Mapoly0101s0017 [KOG1294] Apurinic/apyrimidinic endonuclease and related enzymes; [PTHR22748:SF1] AP ENDONUCLEASE; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE 56.33 0.6759 37 Mapoly0011s0044 [K03132] transcription initiation factor TFIID subunit 7; [PF04658] TAFII55 protein conserved region; [PTHR12228] TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED; [GO:0005669] transcription factor TFIID complex; [GO:0006367] transcription initiation from RNA polymerase II promoter 58.89 0.6568 38 Mapoly0044s0131 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN 59.04 0.6207 39 Mapoly0010s0090 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG1947] Leucine rich repeat proteins, some proteins contain F-box 59.77 0.6137 40 Mapoly0109s0026 [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat 62.74 0.6473 41 Mapoly0002s0230 [GO:0003677] DNA binding; [GO:0000784] nuclear chromosome, telomeric region; [PF02765] Telomeric single stranded DNA binding POT1/CDC13; [GO:0043047] single-stranded telomeric DNA binding; [PTHR14513] PROTECTION OF TELOMERES 1; [KOG4757] Predicted telomere binding protein; [GO:0000723] telomere maintenance 64.06 0.6537 42 Mapoly0044s0127 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR23041] RING FINGER DOMAIN-CONTAINING; [PF13923] Zinc finger, C3HC4 type (RING finger) 64.27 0.5423 43 Mapoly0024s0064 [PF07962] Replication Fork Protection Component Swi3; [GO:0008270] zinc ion binding; [PTHR13220] TIMELESS INTERACTING-RELATED; [PF00098] Zinc knuckle; [GO:0006974] response to DNA damage stimulus; [GO:0005634] nucleus; [GO:0048478] replication fork protection; [GO:0003676] nucleic acid binding; [GO:0007049] cell cycle 68.41 0.6145 44 Mapoly0066s0106 [PTHR15588] LSM1; [KOG1784] Small Nuclear ribonucleoprotein splicing factor; [K12627] U6 snRNA-associated Sm-like protein LSm8; [PF01423] LSM domain 68.41 0.6636 45 Mapoly0025s0110 - 71.13 0.6464 46 Mapoly0005s0248 [PF10275] Peptidase C65 Otubain; [K09602] ubiquitin thioesterase protein OTUB1 [EC:3.4.-.-]; [PTHR12931] UBIQUITIN THIOLESTERASE PROTEIN OTUB; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [KOG3991] Uncharacterized conserved protein 71.29 0.6293 47 Mapoly0107s0039 [PF03819] MazG nucleotide pyrophosphohydrolase domain; [PTHR14552:SF2] SUBFAMILY NOT NAMED; [PTHR14552] FAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain 72.23 0.6460 48 Mapoly0001s0311 [PTHR15131] SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1; [PF09808] Small nuclear RNA activating complex (SNAPc), subunit SNAP43 72.99 0.6458 49 Mapoly0007s0039 [PTHR12357] YTH (YT521-B HOMOLOGY) DOMAIN-CONTAINING; [PF04146] YT521-B-like domain 73.27 0.6374 50 Mapoly0028s0097 [GO:0003677] DNA binding; [GO:0008270] zinc ion binding; [K03017] DNA-directed RNA polymerase II subunit RPB9; [PTHR11239:SF1] DNA-DIRECTED RNA POLYMERASE II; [KOG2691] RNA polymerase II subunit 9; [PF02150] RNA polymerases M/15 Kd subunit; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11239] DNA-DIRECTED RNA POLYMERASE; [PF01096] Transcription factor S-II (TFIIS) 75.99 0.6251