Guide Gene
- Gene ID
- Mapoly0025s0011
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0003723] RNA binding; [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01472] PUA domain; [PF01189] NOL1/NOP2/sun family
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0025s0011 [GO:0003723] RNA binding; [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01472] PUA domain; [PF01189] NOL1/NOP2/sun family 0.00 1.0000 1 Mapoly0078s0010 [PTHR11246] PRE-MRNA SPLICING FACTOR; [PF13429] Tetratricopeptide repeat 8.12 0.6470 2 Mapoly0095s0043 [KOG3043] Predicted hydrolase related to dienelactone hydrolase; [GO:0016787] hydrolase activity; [PTHR17630] DIENELACTONE HYDROLASE; [PF01738] Dienelactone hydrolase family 11.05 0.5522 3 Mapoly0033s0012 [GO:0005524] ATP binding; [2.5.1.75] tRNA dimethylallyltransferase.; [PTHR11088] TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED; [K00791] tRNA dimethylallyltransferase [EC:2.5.1.75]; [GO:0008033] tRNA processing; [PF01715] IPP transferase 17.15 0.6253 4 Mapoly0145s0019 [K03353] anaphase-promoting complex subunit 6; [PF13414] TPR repeat; [KOG1173] Anaphase-promoting complex (APC), Cdc16 subunit; [PF13424] Tetratricopeptide repeat; [PTHR12558:SF9] CELL DIVISION CYCLE 16; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 3 21.35 0.6428 5 Mapoly0004s0034 [PTHR21738:SF0] SUBFAMILY NOT NAMED; [PTHR21738] UNCHARACTERIZED; [KOG3190] Uncharacterized conserved protein; [PF06102] Domain of unknown function (DUF947) 23.49 0.6159 6 Mapoly0036s0146 [KOG1803] DNA helicase; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain; [PTHR10887:SF140] SUBFAMILY NOT NAMED 29.55 0.6386 7 Mapoly0028s0143 [GO:0005524] ATP binding; [GO:0019206] nucleoside kinase activity; [KOG4235] Mitochondrial thymidine kinase 2/deoxyguanosine kinase; [PTHR10513] DEOXYNUCLEOSIDE KINASE; [PF01712] Deoxynucleoside kinase; [GO:0006139] nucleobase-containing compound metabolic process 32.43 0.6340 8 Mapoly0064s0104 [PF13355] Protein of unknown function (DUF4101) 36.61 0.6330 9 Mapoly0078s0037 [KOG0987] DNA helicase PIF1/RRM3; [PF05970] PIF1-like helicase; [GO:0006281] DNA repair; [PTHR23274] DNA HELICASE-RELATED; [GO:0003678] DNA helicase activity; [GO:0000723] telomere maintenance 47.40 0.6159 10 Mapoly0001s0380 [K06962] ribosomal RNA assembly protein; [PF05991] YacP-like NYN domain 55.43 0.5604 11 Mapoly0043s0002 [PF00571] CBS domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family; [GO:0030554] adenyl nucleotide binding 57.64 0.5846 12 Mapoly0024s0023 [PTHR20854] INOSITOL MONOPHOSPHATASE; [GO:0046854] phosphatidylinositol phosphorylation; [PF00459] Inositol monophosphatase family; [K01092] myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]; [3.1.3.25] Inositol-phosphate phosphatase.; [KOG2951] Inositol monophosphatase 58.35 0.5938 13 Mapoly0040s0083 [PF13650] Aspartyl protease 60.16 0.6057 14 Mapoly0103s0023 [GO:0003723] RNA binding; [KOG1253] tRNA methyltransferase; [PTHR10631] N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE; [K00555] tRNA (guanine-N2-)-methyltransferase [EC:2.1.1.32]; [2.1.1.32] Transferred entry: 2.1.1.213, 2.1.1.214, 2.1.1.215 and 2.1.1.216.; [GO:0008033] tRNA processing; [PF02005] N2,N2-dimethylguanosine tRNA methyltransferase; [GO:0004809] tRNA (guanine-N2-)-methyltransferase activity 62.28 0.6075 15 Mapoly0163s0014 [PF00168] C2 domain; [PTHR32246] FAMILY NOT NAMED; [GO:0005515] protein binding 68.94 0.5601 16 Mapoly0010s0191 [PF04055] Radical SAM superfamily; [PTHR13930] RSAFD1-RELATED; [PF00258] Flavodoxin; [PF08608] Wyosine base formation; [GO:0016491] oxidoreductase activity; [PTHR13930:SF0] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [KOG1160] Fe-S oxidoreductase; [GO:0010181] FMN binding 70.71 0.6059 17 Mapoly0157s0006 [PTHR26312] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF13432] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat 74.44 0.5912 18 Mapoly0082s0025 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [KOG4214] Myotrophin and similar proteins; [PF00415] Regulator of chromosome condensation (RCC1) repeat; [PF12796] Ankyrin repeats (3 copies) 75.89 0.5742 19 Mapoly0006s0083 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 76.76 0.6048 20 Mapoly0106s0048 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PTHR24009] FAMILY NOT NAMED; [GO:0046872] metal ion binding; [PF12872] OST-HTH/LOTUS domain 77.23 0.5776 21 Mapoly0173s0010 [GO:0005524] ATP binding; [PF09262] Peroxisome biogenesis factor 1, N-terminal; [GO:0005777] peroxisome; [PTHR23077:SF12] PEROXISOME BIOGENESIS FACTOR 1 (PEROXIN-1); [GO:0006625] protein targeting to peroxisome; [GO:0005778] peroxisomal membrane; [GO:0007031] peroxisome organization; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [GO:0042623] ATPase activity, coupled; [KOG0735] AAA+-type ATPase; [K13338] peroxin-1 80.31 0.5820 22 Mapoly0096s0033 - 80.60 0.5536 23 Mapoly0060s0114 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 81.34 0.6034 24 Mapoly0139s0011 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [KOG2554] Pseudouridylate synthase; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity 83.79 0.5671 25 Mapoly0049s0091 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [KOG0385] Chromatin remodeling complex WSTF-ISWI, small subunit 85.38 0.5413 26 Mapoly0102s0016 [GO:0055114] oxidation-reduction process; [PTHR11063] GLUTAMATE SEMIALDEHYDE DEHYDROGENASE; [KOG4165] Gamma-glutamyl phosphate reductase; [GO:0016491] oxidoreductase activity; [K12657] delta-1-pyrroline-5-carboxylate synthetase [EC:2.7.2.11 1.2.1.41]; [2.7.2.11] Glutamate 5-kinase.; [PF00696] Amino acid kinase family; [GO:0008152] metabolic process; [1.2.1.41] Glutamate-5-semialdehyde dehydrogenase.; [PF00171] Aldehyde dehydrogenase family 86.61 0.5516 27 Mapoly0008s0066 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0761] Mitochondrial carrier protein CGI-69; [PTHR24089:SF25] SUBFAMILY NOT NAMED 87.09 0.5093 28 Mapoly0029s0082 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0016874] ligase activity; [6.1.1.12] Aspartate--tRNA ligase.; [PF02938] GAD domain; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [KOG2411] Aspartyl-tRNA synthetase, mitochondrial; [PTHR22594:SF5] ASPARTYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N) 87.43 0.5855 29 Mapoly0008s0208 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0005515] protein binding; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K12736] peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0882] Cyclophilin-related peptidyl-prolyl cis-trans isomerase; [PF00400] WD domain, G-beta repeat 89.26 0.5928 30 Mapoly0024s0107 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [K03350] anaphase-promoting complex subunit 3; [KOG1126] DNA-binding cell division cycle control protein; [PF13181] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF11] CELL DIVISION CYCLE 27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 3 92.88 0.5879 31 Mapoly0067s0015 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [PF09273] Rubisco LSMT substrate-binding 93.83 0.5742 32 Mapoly0002s0209 [PF04413] 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); [K02527] 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.-.-.-]; [PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [2.-.-.-] Transferases. 95.67 0.5509 33 Mapoly0010s0026 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR13114] TRANSCRIPTIONAL CO-ACTIVATOR CRSP77-RELATED; [PF10156] Subunit 17 of Mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex 98.67 0.5739 34 Mapoly0002s0051 [PF03205] Molybdopterin guanine dinucleotide synthesis protein B; [PTHR12755] CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P; [PF06807] Pre-mRNA cleavage complex II protein Clp1 99.63 0.6005 35 Mapoly0081s0053 [PF04452] RNA methyltransferase; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR30027] RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E; [K09761] ribosomal RNA small subunit methyltransferase E [EC:2.1.1.-]; [GO:0006364] rRNA processing 101.00 0.5825 36 Mapoly0009s0235 [GO:0000922] spindle pole; [PTHR19302:SF27] SUBFAMILY NOT NAMED; [PF04130] Spc97 / Spc98 family; [GO:0000226] microtubule cytoskeleton organization; [GO:0005815] microtubule organizing center; [PTHR19302] GAMMA TUBULIN COMPLEX PROTEIN; [KOG2065] Gamma-tubulin ring complex protein 108.31 0.5831 37 Mapoly0048s0058 [PTHR12821] BYSTIN; [KOG3871] Cell adhesion complex protein bystin; [PTHR12821:SF0] SUBFAMILY NOT NAMED; [PF05291] Bystin 114.24 0.5761 38 Mapoly0039s0098 [PF13812] Pentatricopeptide repeat domain; [PF01713] Smr domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 116.58 0.5899 39 Mapoly0162s0018 [GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation; [PTHR11229:SF0] SUBFAMILY NOT NAMED 116.96 0.5642 40 Mapoly0032s0137 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219) 117.17 0.5191 41 Mapoly0023s0143 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PTHR23073:SF18] SUBFAMILY NOT NAMED; [PF00004] ATPase family associated with various cellular activities (AAA) 117.39 0.5861 42 Mapoly0032s0136 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219) 123.39 0.4975 43 Mapoly0032s0012 [PTHR11808] TRANS-SULFURATION ENZYME FAMILY MEMBER; [GO:0030170] pyridoxal phosphate binding; [PF06838] Methionine gamma-lyase; [PTHR11808:SF41] CYSTATHIONINE GAMMA-LYASE-RELATED 131.34 0.5609 44 Mapoly0056s0087 [PF02897] Prolyl oligopeptidase, N-terminal beta-propeller domain; [GO:0008236] serine-type peptidase activity; [GO:0070008] serine-type exopeptidase activity; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis; [PTHR11757] PROTEASE FAMILY S9A OLIGOPEPTIDASE; [PF00326] Prolyl oligopeptidase family; [KOG2237] Predicted serine protease 131.49 0.5811 45 Mapoly0045s0079 [PTHR12818:SF0] SUBFAMILY NOT NAMED; [PF01980] Uncharacterised protein family UPF0066; [KOG2942] Uncharacterized conserved protein; [PTHR12818] UNCHARACTERIZED 134.20 0.5796 46 Mapoly0037s0098 [KOG3089] Predicted DEAD-box-containing helicase; [PTHR24030] FAMILY NOT NAMED; [PF14617] U3-containing 90S pre-ribosomal complex subunit 138.66 0.5761 47 Mapoly0006s0240 [PF13343] Bacterial extracellular solute-binding protein; [PTHR30222] SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 141.51 0.5689 48 Mapoly0047s0092 [PF00899] ThiF family; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [KOG2018] Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis; [GO:0003824] catalytic activity 144.19 0.5619 49 Mapoly0132s0039 [KOG2780] Ribosome biogenesis protein RPF1, contains IMP4 domain; [PTHR22734:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain 145.10 0.5692 50 Mapoly0021s0145 [PF02493] MORN repeat 146.23 0.5620