Guide Gene

Gene ID
Mapoly0024s0072
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG0005] Ubiquitin-like protein; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [K08770] ubiquitin C

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0024s0072 [KOG0005] Ubiquitin-like protein; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [K08770] ubiquitin C 0.00 1.0000
1 Mapoly0031s0122 [PF10151] Uncharacterised conserved protein (DUF2359); [PTHR13448] UNCHARACTERIZED; [KOG4467] Uncharacterized conserved protein5.660.8035
2 Mapoly0144s0012 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain5.830.8341
3 Mapoly0003s0160 [PTHR13608:SF3] SUBFAMILY NOT NAMED; [PTHR13608] UNCHARACTERIZED8.490.7914
4 Mapoly0020s0150 [GO:0005840] ribosome; [KOG3418] 60S ribosomal protein L27; [PF01777] Ribosomal L27e protein family; [K02901] large subunit ribosomal protein L27e; [PTHR10497] 60S RIBOSOMAL PROTEIN L27; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR10497:SF0] 60S RIBOSOMAL PROTEIN L27; [GO:0006412] translation12.040.8358
5 Mapoly0007s0247 [PF00168] C2 domain; [GO:0005515] protein binding16.880.7436
6 Mapoly0083s0043 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED17.660.7830
7 Mapoly0014s0053 [KOG4408] Putative Mg2+ and Co2+ transporter CorD; [PF04379] Protein of unknown function (DUF525); [PTHR14289] F-BOX ONLY PROTEIN 3; [K10290] F-box protein 318.080.8244
8 Mapoly0204s0014 -18.380.7710
9 Mapoly0153s0026 [PF00650] CRAL/TRIO domain; [PTHR10174] RETINALDEHYDE BINDING PROTEIN-RELATED; [KOG1471] Phosphatidylinositol transfer protein SEC14 and related proteins19.080.7907
10 Mapoly0013s0175 [GO:0016787] hydrolase activity; [PF07687] Peptidase dimerisation domain; [PTHR11014] PEPTIDASE M20 FAMILY MEMBER; [GO:0008152] metabolic process; [KOG2276] Metalloexopeptidases; [3.5.1.16] Acetylornithine deacetylase.; [PF01546] Peptidase family M20/M25/M40; [K01438] acetylornithine deacetylase [EC:3.5.1.16]; [PTHR11014:SF7] ACETYLORNITHINE DEACETYLASE22.690.7995
11 Mapoly0078s0038 [GO:0031072] heat shock protein binding; [KOG0712] Molecular chaperone (DnaJ superfamily); [PTHR24076:SF1] SUBFAMILY NOT NAMED; [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding24.490.7498
12 Mapoly0144s0027 [PTHR12872] ALPHA-N-ACETYLGLUCOSAMINIDASE; [KOG2233] Alpha-N-acetylglucosaminidase; [PF05089] Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; [K01205] alpha-N-acetylglucosaminidase [EC:3.2.1.50]; [3.2.1.50] Alpha-N-acetylglucosaminidase.; [PF12972] Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain; [PF12971] Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain24.490.7727
13 Mapoly0214s0002 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0869] CCAAT-binding factor, subunit A (HAP3)24.720.7828
14 Mapoly0028s0100 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR31945] FAMILY NOT NAMED25.690.7642
15 Mapoly0024s0100 [GO:0005524] ATP binding; [PTHR11669] REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; [KOG0990] Replication factor C, subunit RFC5; [PF00004] ATPase family associated with various cellular activities (AAA); [PF08542] Replication factor C C-terminal domain; [K10756] replication factor C subunit 3/529.830.7851
16 Mapoly0077s0024 [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED31.530.7364
17 Mapoly0081s0083 [GO:0005524] ATP binding; [PTHR24054] CASEIN KINASE II SUBUNIT ALPHA; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [K03097] casein kinase II subunit alpha [EC:2.7.11.1]; [GO:0006468] protein phosphorylation; [KOG0668] Casein kinase II, alpha subunit32.330.7448
18 Mapoly0161s0023 [PTHR16119] FAMILY NOT NAMED; [PF07857] CEO family (DUF1632)36.220.6948
19 Mapoly0174s0020 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain; [KOG1801] tRNA-splicing endonuclease positive effector (SEN1)38.410.7711
20 Mapoly0099s0059 [GO:0005840] ribosome; [PF00181] Ribosomal Proteins L2, RNA binding domain; [PTHR13691:SF16] 50S RIBOSOMAL PROTEIN L2; [PF03947] Ribosomal Proteins L2, C-terminal domain; [PTHR13691] RIBOSOMAL PROTEIN L2; [GO:0003735] structural constituent of ribosome; [KOG2309] 60s ribosomal protein L2/L8; [GO:0005622] intracellular; [GO:0006412] translation38.990.7888
21 Mapoly0146s0024 [PTHR24412] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif39.380.7031
22 Mapoly0001s0136 -39.840.7733
23 Mapoly0167s0026 [PTHR19134] PROTEIN-TYROSINE PHOSPHATASE; [PF00102] Protein-tyrosine phosphatase; [GO:0006470] protein dephosphorylation; [KOG0789] Protein tyrosine phosphatase; [GO:0004725] protein tyrosine phosphatase activity40.310.7096
24 Mapoly0013s0069 [PF08263] Leucine rich repeat N-terminal domain; [PF12819] Carbohydrate-binding protein of the ER; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE40.550.6145
25 Mapoly0168s0004 -43.420.7690
26 Mapoly0068s0008 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [KOG1338] Uncharacterized conserved protein; [GO:0005515] protein binding; [PF00856] SET domain43.750.7392
27 Mapoly0010s0153 [KOG1390] Acetyl-CoA acetyltransferase; [PTHR18919] ACETYL-COA C-ACYLTRANSFERASE; [K00626] acetyl-CoA C-acetyltransferase [EC:2.3.1.9]; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF00108] Thiolase, N-terminal domain; [GO:0008152] metabolic process; [2.3.1.9] Acetyl-CoA C-acetyltransferase.; [PF02803] Thiolase, C-terminal domain43.990.7562
28 Mapoly0102s0008 [GO:0005840] ribosome; [KOG0893] 60S ribosomal protein L31; [PTHR10956] 60S RIBOSOMAL PROTEIN L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01198] Ribosomal protein L31e; [K02910] large subunit ribosomal protein L31e; [GO:0006412] translation44.600.7872
29 Mapoly0004s0213 [PF03215] Rad17 cell cycle checkpoint protein; [GO:0005634] nucleus; [GO:0006281] DNA repair; [PTHR12172] CELL CYCLE CHECKPOINT PROTEIN RAD17; [KOG1970] Checkpoint RAD17-RFC complex, RAD17/RAD24 component; [PTHR12172:SF0] SUBFAMILY NOT NAMED; [K06662] cell cycle checkpoint protein; [GO:0007049] cell cycle45.460.7472
30 Mapoly0011s0129 [KOG0131] Splicing factor 3b, subunit 4; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PTHR24011] FAMILY NOT NAMED; [PF07145] Ataxin-2 C-terminal region; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)46.010.7352
31 Mapoly0033s0132 [PF00650] CRAL/TRIO domain; [PTHR10174] RETINALDEHYDE BINDING PROTEIN-RELATED; [PF03765] CRAL/TRIO, N-terminal domain; [KOG1470] Phosphatidylinositol transfer protein PDR16 and related proteins47.810.7090
32 Mapoly0005s0021 [PF13266] Protein of unknown function (DUF4057); [PTHR31132] FAMILY NOT NAMED49.140.7745
33 Mapoly0002s0217 [PF00183] Hsp90 protein; [GO:0005524] ATP binding; [GO:0006950] response to stress; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0006457] protein folding; [K04079] molecular chaperone HtpG; [PTHR11528] HEAT SHOCK PROTEIN 90; [KOG0019] Molecular chaperone (HSP90 family); [GO:0051082] unfolded protein binding51.000.6999
34 Mapoly0148s0016 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG1790] 60s ribosomal protein L34; [GO:0005622] intracellular; [PTHR10759] 60S RIBOSOMAL PROTEIN L34; [K02915] large subunit ribosomal protein L34e; [GO:0006412] translation; [PF01199] Ribosomal protein L34e51.810.7845
35 Mapoly0078s0021 [PTHR23153] UBX-RELATED52.150.7043
36 Mapoly0028s0075 [GO:0003677] DNA binding; [KOG1756] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H453.240.7816
37 Mapoly0084s0084 [PF01221] Dynein light chain type 1; [GO:0005875] microtubule associated complex; [GO:0007017] microtubule-based process; [KOG3430] Dynein light chain type 1; [PTHR11886] DYNEIN LIGHT CHAIN; [K10418] dynein light chain LC8-type53.240.7328
38 Mapoly0107s0039 [PF03819] MazG nucleotide pyrophosphohydrolase domain; [PTHR14552:SF2] SUBFAMILY NOT NAMED; [PTHR14552] FAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain53.670.6973
39 Mapoly0043s0127 [GO:0031625] ubiquitin protein ligase binding; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K10609] cullin 4; [PF10557] Cullin protein neddylation domain; [PTHR11932] CULLIN; [PF00888] Cullin family; [KOG2167] Cullins; [PTHR11932:SF27] SUBFAMILY NOT NAMED54.420.7400
40 Mapoly0005s0062 [GO:0005840] ribosome; [PF01158] Ribosomal protein L36e; [GO:0003735] structural constituent of ribosome; [K02920] large subunit ribosomal protein L36e; [GO:0005622] intracellular; [KOG3452] 60S ribosomal protein L36; [PTHR10114] 60S RIBOSOMAL PROTEIN L36; [GO:0006412] translation55.370.7827
41 Mapoly0057s0091 [PF04577] Protein of unknown function (DUF563); [PTHR20961] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups55.640.6316
42 Mapoly0179s0022 [PTHR10857] COPINE; [PF10539] Development and cell death domain55.930.7251
43 Mapoly0004s0307 [PF00291] Pyridoxal-phosphate dependent enzyme; [KOG1252] Cystathionine beta-synthase and related enzymes; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE57.640.6440
44 Mapoly0069s0082 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding58.580.7549
45 Mapoly0020s0166 [GO:0005840] ribosome; [KOG3255] 60S ribosomal protein L9; [PF00347] Ribosomal protein L6; [GO:0003735] structural constituent of ribosome; [GO:0019843] rRNA binding; [K02940] large subunit ribosomal protein L9e; [PTHR11655] 60S/50S RIBOSOMAL PROTEIN L6/L9; [GO:0006412] translation59.180.7765
46 Mapoly0109s0037 [KOG1327] Copine; [PF00168] C2 domain; [PTHR10857] COPINE; [PF07002] Copine; [GO:0005515] protein binding59.250.7469
47 Mapoly0124s0021 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR31945] FAMILY NOT NAMED60.120.7038
48 Mapoly0086s0014 [PF06677] Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27); [PTHR16537] FAMILY NOT NAMED61.820.7338
49 Mapoly0119s0044 [GO:0016021] integral to membrane; [KOG1278] Endosomal membrane proteins, EMP70; [PF02990] Endomembrane protein 70; [PTHR10766] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN61.970.7225
50 Mapoly0003s0284 [GO:0005840] ribosome; [GO:0005515] protein binding; [GO:0003735] structural constituent of ribosome; [KOG0004] Ubiquitin/40S ribosomal protein S27a fusion; [GO:0005622] intracellular; [PF01599] Ribosomal protein S27a; [PF00240] Ubiquitin family; [K02977] small subunit ribosomal protein S27Ae; [PTHR10666] UBIQUITIN; [GO:0006412] translation62.480.7774
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