Guide Gene

Gene ID
Mapoly0010s0185
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10169] DNA TOPOISOMERASE/GYRASE; [K02469] DNA gyrase subunit A [EC:5.99.1.3]; [GO:0006265] DNA topological change; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [PF00521] DNA gyrase/topoisomerase IV, subunit A; [GO:0005694] chromosome; [KOG0355] DNA topoisomerase type II; [GO:0003916] DNA topoisomerase activity; [PF03989] DNA gyrase C-terminal domain, beta-propeller; [5.99.1.3] DNA topoisomerase (ATP-hydrolyzing).

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0398 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PF01751] Toprim domain; [PTHR10169] DNA TOPOISOMERASE/GYRASE; [PF00986] DNA gyrase B subunit, carboxyl terminus; [GO:0006265] DNA topological change; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [KOG0355] DNA topoisomerase type II; [5.99.1.3] DNA topoisomerase (ATP-hydrolyzing).; [K02470] DNA gyrase subunit B [EC:5.99.1.3]; [PF00204] DNA gyrase B
Mapoly0002s0326 [GO:0003922] GMP synthase (glutamine-hydrolyzing) activity; [GO:0005524] ATP binding; [PF00958] GMP synthase C terminal domain; [6.3.5.2] GMP synthase (glutamine-hydrolyzing).; [KOG1622] GMP synthase; [PTHR11922] GMP SYNTHASE-RELATED; [GO:0006177] GMP biosynthetic process; [K01951] GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]; [PF00117] Glutamine amidotransferase class-I; [GO:0006164] purine nucleotide biosynthetic process
Mapoly0003s0044 [PTHR10745:SF0] GLYCYL-TRNA SYNTHETASE; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [PTHR10745] GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2; [6.1.1.14] Glycine--tRNA ligase.; [KOG2298] Glycyl-tRNA synthetase and related class II tRNA synthetase; [K01880] glycyl-tRNA synthetase [EC:6.1.1.14]; [PF03129] Anticodon binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity
Mapoly0003s0096 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [PF09273] Rubisco LSMT substrate-binding
Mapoly0004s0145 [PTHR24012] FAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)
Mapoly0005s0182 [PF02784] Pyridoxal-dependent decarboxylase, pyridoxal binding domain; [PTHR11482:SF5] DIAMINOPIMELATE DECARBOXYLASE; [PF00278] Pyridoxal-dependent decarboxylase, C-terminal sheet domain; [KOG0622] Ornithine decarboxylase; [PTHR11482] ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE; [4.1.1.20] Diaminopimelate decarboxylase.; [GO:0003824] catalytic activity; [K01586] diaminopimelate decarboxylase [EC:4.1.1.20]
Mapoly0005s0193 [PF00206] Lyase; [PF14698] Argininosuccinate lyase C-terminal; [4.3.2.1] Argininosuccinate lyase.; [KOG1316] Argininosuccinate lyase; [GO:0004056] argininosuccinate lyase activity; [PTHR11444:SF3] ARGININOSUCCINATE LYASE; [PTHR11444] ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE; [GO:0042450] arginine biosynthetic process via ornithine; [K01755] argininosuccinate lyase [EC:4.3.2.1]
Mapoly0006s0083 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis
Mapoly0010s0185 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10169] DNA TOPOISOMERASE/GYRASE; [K02469] DNA gyrase subunit A [EC:5.99.1.3]; [GO:0006265] DNA topological change; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [PF00521] DNA gyrase/topoisomerase IV, subunit A; [GO:0005694] chromosome; [KOG0355] DNA topoisomerase type II; [GO:0003916] DNA topoisomerase activity; [PF03989] DNA gyrase C-terminal domain, beta-propeller; [5.99.1.3] DNA topoisomerase (ATP-hydrolyzing).
Mapoly0041s0149 [GO:0009113] purine nucleobase biosynthetic process; [PF02844] Phosphoribosylglycinamide synthetase, N domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [PF01071] Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; [GO:0004637] phosphoribosylamine-glycine ligase activity; [K01945] phosphoribosylamine--glycine ligase [EC:6.3.4.13]; [PF02843] Phosphoribosylglycinamide synthetase, C domain; [6.3.4.13] Phosphoribosylamine--glycine ligase.
Mapoly0045s0011 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PF01588] Putative tRNA binding domain; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0000049] tRNA binding; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG1247] Methionyl-tRNA synthetase
Mapoly0054s0003 [K01409] O-sialoglycoprotein endopeptidase [EC:3.4.24.57]; [KOG2708] Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold); [PF00814] Glycoprotease family; [PTHR11735] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [3.4.24.57] O-sialoglycoprotein endopeptidase.; [PTHR11735:SF6] SUBFAMILY NOT NAMED
Mapoly0054s0113 [GO:0006396] RNA processing; [2.1.1.-] Methyltransferases.; [PTHR11061] RNA M5U METHYLTRANSFERASE FAMILY; [K00599] trans-aconitate 2-methyltransferase [EC:2.1.1.144]; [GO:0008173] RNA methyltransferase activity; [PF05958] tRNA (Uracil-5-)-methyltransferase; [KOG2187] tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes
Mapoly0065s0074 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [K01868] threonyl-tRNA synthetase [EC:6.1.1.3]; [PTHR11451] TRNA SYNTHETASE-RELATED; [6.1.1.3] Threonine--tRNA ligase.; [PF03129] Anticodon binding domain; [KOG1637] Threonyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [PF02824] TGS domain; [GO:0004812] aminoacyl-tRNA ligase activity
Mapoly0071s0086 [KOG0623] Glutamine amidotransferase/cyclase; [PTHR21235:SF2] IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF (IGP SYNTHASE SUBUNIT HISF); [PTHR21235] IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H (IGP SYNTHASE SUBUNIT HISF/H); [GO:0000105] histidine biosynthetic process; [K01663] glutamine amidotransferase / cyclase [EC:2.4.2.- 4.1.3.-]; [PF00117] Glutamine amidotransferase class-I; [PF00977] Histidine biosynthesis protein; [4.1.3.-] Oxo-acid-lyases.; [2.4.2.-] Pentosyltransferases.
Mapoly0074s0049 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [KOG1249] Predicted GTPases; [GO:0005525] GTP binding
Mapoly0114s0038 [PF13812] Pentatricopeptide repeat domain; [PTHR13547] UNCHARACTERIZED; [PTHR13547:SF2] gb def: hypothetical protein [arabidopsis thaliana]; [PF11977] Zc3h12a-like Ribonuclease NYN domain
Mapoly0120s0021 -
Mapoly0132s0010 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0004815] aspartate-tRNA ligase activity; [GO:0005737] cytoplasm; [GO:0006422] aspartyl-tRNA aminoacylation; [6.1.1.12] Aspartate--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [KOG0556] Aspartyl-tRNA synthetase; [PTHR22594:SF10] SUBFAMILY NOT NAMED; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)
Mapoly0153s0002 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [6.1.1.4] Leucine--tRNA ligase.; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [K01869] leucyl-tRNA synthetase [EC:6.1.1.4]; [PF00133] tRNA synthetases class I (I, L, M and V); [KOG0437] Leucyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity
Mapoly0157s0006 [PTHR26312] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF13432] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat