Guide Gene

Gene ID
Mapoly0007s0071
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity

Coexpressed Gene Network

Gene ID Description Information
Mapoly0004s0242 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain
Mapoly0007s0071 [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity
Mapoly0011s0006 [GO:0008270] zinc ion binding; [KOG0509] Ankyrin repeat and DHHC-type Zn-finger domain containing proteins; [PF01529] DHHC palmitoyltransferase; [PTHR24161] FAMILY NOT NAMED; [PF12796] Ankyrin repeats (3 copies)
Mapoly0019s0039 [K01409] O-sialoglycoprotein endopeptidase [EC:3.4.24.57]; [PF00814] Glycoprotease family; [KOG2707] Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold); [PTHR11735] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [3.4.24.57] O-sialoglycoprotein endopeptidase.
Mapoly0020s0147 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG0315] G-protein beta subunit-like protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat
Mapoly0021s0010 -
Mapoly0021s0139 [PF02586] Uncharacterised ACR, COG2135; [KOG2618] Uncharacterized conserved protein; [PTHR13604:SF0] SUBFAMILY NOT NAMED; [PTHR13604] DC12-RELATED
Mapoly0034s0116 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0884] Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding
Mapoly0040s0107 -
Mapoly0084s0016 -
Mapoly0105s0006 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0870] DNA polymerase epsilon, subunit D
Mapoly0113s0040 [GO:0030975] thiamine binding; [GO:0005524] ATP binding; [2.7.6.2] Thiamine diphosphokinase.; [GO:0009229] thiamine diphosphate biosynthetic process; [KOG3153] Thiamine pyrophosphokinase; [K00949] thiamine pyrophosphokinase [EC:2.7.6.2]; [GO:0004788] thiamine diphosphokinase activity; [PF04265] Thiamin pyrophosphokinase, vitamin B1 binding domain; [PTHR13622] THIAMIN PYROPHOSPHOKINASE; [PF04263] Thiamin pyrophosphokinase, catalytic domain
Mapoly0113s0058 [PTHR31307] FAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain
Mapoly0120s0014 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE
Mapoly0124s0020 [PTHR19317] PRENYLATED RAB ACCEPTOR 1-RELATED; [PF03208] PRA1 family protein; [PTHR19317:SF1] PRENYLATED RAB ACCEPTOR 1
Mapoly0124s0030 [GO:0016020] membrane; [GO:0004168] dolichol kinase activity; [PTHR13205] TRANSMEMBRANE PROTEIN 15-RELATED; [KOG2468] Dolichol kinase; [PF01148] Cytidylyltransferase family; [2.7.1.108] Dolichol kinase.; [GO:0043048] dolichyl monophosphate biosynthetic process; [GO:0030176] integral to endoplasmic reticulum membrane; [K00902] dolichol kinase [EC:2.7.1.108]; [GO:0016772] transferase activity, transferring phosphorus-containing groups
Mapoly0124s0044 [PTHR23041] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding
Mapoly0147s0019 [PTHR13247] TETRATRICOPEPTIDE REPEAT PROTEIN 11 (TPR REPEAT PROTEIN 11); [PTHR13247:SF0] SUBFAMILY NOT NAMED; [GO:0000266] mitochondrial fission; [KOG3364] Membrane protein involved in organellar division; [PF14853] Fis1 C-terminal tetratricopeptide repeat; [PF14852] Fis1 N-terminal tetratricopeptide repeat
Mapoly0154s0023 -
Mapoly0165s0013 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0005515] protein binding; [PTHR22844] F-BOX AND WD40 DOMAIN PROTEIN; [KOG0274] Cdc4 and related F-box and WD-40 proteins; [GO:0046872] metal ion binding; [PF00400] WD domain, G-beta repeat
Mapoly0184s0019 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED