Guide Gene

Gene ID
Mapoly0007s0071
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0007s0071 [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity 0.00 1.0000
1 Mapoly0021s0139 [PF02586] Uncharacterised ACR, COG2135; [KOG2618] Uncharacterized conserved protein; [PTHR13604:SF0] SUBFAMILY NOT NAMED; [PTHR13604] DC12-RELATED3.460.8280
2 Mapoly0020s0147 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG0315] G-protein beta subunit-like protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat7.870.8253
3 Mapoly0124s0044 [PTHR23041] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding8.830.8040
4 Mapoly0084s0016 -9.490.7665
5 Mapoly0113s0058 [PTHR31307] FAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain9.800.7895
6 Mapoly0011s0172 [GO:0005515] protein binding; [K13124] mitogen-activated protein kinase organizer 1; [PTHR22842] WD40 REPEAT PROTEIN; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat10.200.8080
7 Mapoly0077s0005 [PTHR10336] PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN; [PF00168] C2 domain; [PF00387] Phosphatidylinositol-specific phospholipase C, Y domain; [GO:0035556] intracellular signal transduction; [PF09279] Phosphoinositide-specific phospholipase C, efhand-like; [GO:0005515] protein binding; [GO:0007165] signal transduction; [GO:0004435] phosphatidylinositol phospholipase C activity; [KOG0169] Phosphoinositide-specific phospholipase C; [PF00388] Phosphatidylinositol-specific phospholipase C, X domain; [GO:0006629] lipid metabolic process11.750.8140
8 Mapoly0146s0042 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding13.860.7645
9 Mapoly0122s0024 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [KOG0660] Mitogen-activated protein kinase; [GO:0004672] protein kinase activity; [PTHR24055] MITOGEN-ACTIVATED PROTEIN KINASE; [GO:0006468] protein phosphorylation14.280.8213
10 Mapoly0124s0030 [GO:0016020] membrane; [GO:0004168] dolichol kinase activity; [PTHR13205] TRANSMEMBRANE PROTEIN 15-RELATED; [KOG2468] Dolichol kinase; [PF01148] Cytidylyltransferase family; [2.7.1.108] Dolichol kinase.; [GO:0043048] dolichyl monophosphate biosynthetic process; [GO:0030176] integral to endoplasmic reticulum membrane; [K00902] dolichol kinase [EC:2.7.1.108]; [GO:0016772] transferase activity, transferring phosphorus-containing groups17.180.8202
11 Mapoly0044s0112 [PF04685] Protein of unknown function, DUF608; [PTHR12654:SF3] gb def: y105e8a.10 [caenorhabditis elegans]; [PF12215] beta-Glucocerebrosidase 2 N terminal; [GO:0016021] integral to membrane; [GO:0004348] glucosylceramidase activity; [PTHR12654] BILE ACID BETA-GLUCOSIDASE-RELATED; [GO:0006665] sphingolipid metabolic process17.230.8249
12 Mapoly0080s0044 [PF13088] BNR repeat-like domain19.420.7755
13 Mapoly0049s0024 [GO:0006284] base-excision repair; [K10801] methyl-CpG-binding domain protein 4 [EC:3.2.2.-]; [PTHR15074:SF0] SUBFAMILY NOT NAMED; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [PTHR15074] 5-METHYLCYTOSINE G/T MISMATCH-SPECIFIC DNA GLYCOSYLASE; [3.2.2.-] Hydrolyzing N-glycosyl compounds.21.210.8070
14 Mapoly0022s0101 [GO:0016020] membrane; [PF01554] MatE; [GO:0015238] drug transmembrane transporter activity; [GO:0015297] antiporter activity; [GO:0055085] transmembrane transport; [PTHR11206] MULTIDRUG RESISTANCE PROTEIN; [KOG1347] Uncharacterized membrane protein, predicted efflux pump; [GO:0006855] drug transmembrane transport21.660.8114
15 Mapoly0096s0049 [PTHR12677:SF8] UNCHARACTERIZERD; [PTHR12677] UNCHARACTERIZED; [PF09335] SNARE associated Golgi protein22.270.7752
16 Mapoly0102s0044 -22.650.8071
17 Mapoly0067s0056 -25.040.7876
18 Mapoly0004s0080 [GO:0030599] pectinesterase activity; [PF01095] Pectinesterase; [GO:0042545] cell wall modification; [PTHR31321] FAMILY NOT NAMED; [GO:0005618] cell wall25.100.7897
19 Mapoly0034s0116 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0884] Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding26.320.7460
20 Mapoly0001s0248 [KOG1663] O-methyltransferase; [PF07279] Protein of unknown function (DUF1442)27.280.8051
21 Mapoly0011s0006 [GO:0008270] zinc ion binding; [KOG0509] Ankyrin repeat and DHHC-type Zn-finger domain containing proteins; [PF01529] DHHC palmitoyltransferase; [PTHR24161] FAMILY NOT NAMED; [PF12796] Ankyrin repeats (3 copies)27.550.8066
22 Mapoly0040s0107 -30.000.7805
23 Mapoly0016s0132 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF13] ADENINE NUCLEOTIDE TRANSLOCASE; [KOG0750] Mitochondrial solute carrier protein30.500.7544
24 Mapoly0054s0108 [PF13207] AAA domain31.130.7889
25 Mapoly0009s0210 [GO:0036158] outer dynein arm assembly; [PTHR21694] UNCHARACTERIZED; [GO:0036157] outer dynein arm31.180.7590
26 Mapoly0006s0218 [PTHR22891:SF0] SUBFAMILY NOT NAMED; [PTHR22891] EUKARYOTIC TRANSLATION INITIATION FACTOR 2C; [PF02171] Piwi domain; [GO:0005515] protein binding; [KOG1041] Translation initiation factor 2C (eIF-2C) and related proteins31.450.7667
27 Mapoly0105s0006 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0870] DNA polymerase epsilon, subunit D36.440.7421
28 Mapoly0112s0027 [K01578] malonyl-CoA decarboxylase [EC:4.1.1.9]; [GO:0050080] malonyl-CoA decarboxylase activity; [4.1.1.9] Malonyl-CoA decarboxylase.; [GO:0006633] fatty acid biosynthetic process; [KOG3018] Malonyl-CoA decarboxylase; [PF05292] Malonyl-CoA decarboxylase (MCD)37.510.7521
29 Mapoly0140s0040 [PF04791] LMBR1-like membrane protein; [KOG2296] Integral membrane protein; [PTHR21355:SF0] SUBFAMILY NOT NAMED; [PTHR21355] UNCHARACTERIZED39.240.7666
30 Mapoly0005s0253 [PTHR11782:SF3] ADENOSINE DIPHOSPHATASE; [GO:0016787] hydrolase activity; [KOG1386] Nucleoside phosphatase; [PTHR11782] ADENOSINE/GUANOSINE DIPHOSPHATASE; [PF01150] GDA1/CD39 (nucleoside phosphatase) family39.840.7818
31 Mapoly0003s0077 [PTHR15606:SF3] HSP40-RELATED; [KOG4188] Uncharacterized conserved protein; [PF00226] DnaJ domain; [PTHR15606] DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED; [PF12572] Protein of unknown function (DUF3752)39.870.7104
32 Mapoly0184s0019 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED40.000.7749
33 Mapoly0003s0288 [PTHR31307] FAMILY NOT NAMED; [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PF13837] Myb/SANT-like DNA-binding domain40.990.7863
34 Mapoly0062s0007 [PF00448] SRP54-type protein, GTPase domain; [KOG0781] Signal recognition particle receptor, alpha subunit; [GO:0005785] signal recognition particle receptor complex; [GO:0006184] GTP catabolic process; [K13431] signal recognition particle receptor subunit alpha; [GO:0005047] signal recognition particle binding; [GO:0003924] GTPase activity; [GO:0006886] intracellular protein transport; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PF04086] Signal recognition particle, alpha subunit, N-terminal; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS41.790.7879
35 Mapoly0084s0015 [PTHR24356] SERINE/THREONINE-PROTEIN KINASE; [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24356:SF1] SERINE/THREONINE-PROTEIN KINASE; [GO:0006468] protein phosphorylation; [KOG0606] Microtubule-associated serine/threonine kinase and related proteins41.950.7698
36 Mapoly0066s0022 [GO:0016020] membrane; [PTHR11384] ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER; [GO:0005524] ATP binding; [KOG0060] Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [PF06472] ABC transporter transmembrane region 2; [GO:0016887] ATPase activity; [GO:0006810] transport; [PTHR11384:SF3] ATP-BINDING CASSETTE, SUB-FAMILY D, MEMBER 4 (PEROXISOMAL MEMBRANE PROTEIN 69); [PF00005] ABC transporter44.190.7843
37 Mapoly0052s0050 -47.120.7705
38 Mapoly0012s0163 [PTHR20932:SF8] gb def: LOC443603 protein (Fragment); [PTHR20932] LOC443603 PROTEIN-RELATED48.640.8038
39 Mapoly0118s0019 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat; [KOG4378] Nuclear protein COP149.070.7764
40 Mapoly0070s0074 [GO:0005524] ATP binding; [K06633] membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase [EC:2.7.11.1]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [KOG0032] Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily; [PTHR11042] EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE (EIF2-ALPHA KINASE)-RELATED49.850.7731
41 Mapoly0103s0076 [PF10250] GDP-fucose protein O-fucosyltransferase; [PTHR31741] FAMILY NOT NAMED49.900.7753
42 Mapoly0019s0071 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain50.080.7528
43 Mapoly0094s0022 -52.540.7390
44 Mapoly0003s0071 [PTHR12461] HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED; [PF13621] Cupin-like domain52.850.7179
45 Mapoly0120s0027 [PTHR10571:SF0] UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE; [GO:0016021] integral to membrane; [PTHR10571] UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASE; [KOG2788] Glycosyltransferase; [GO:0008963] phospho-N-acetylmuramoyl-pentapeptide-transferase activity; [PF00953] Glycosyl transferase family 4; [K01001] UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]; [2.7.8.15] UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase.55.230.7550
46 Mapoly0002s0022 -55.480.7571
47 Mapoly0047s0019 [PF04922] DIE2/ALG10 family; [PTHR12989] ALPHA-1,2-GLUCOSYLTRANSFERASE ALG10; [GO:0016758] transferase activity, transferring hexosyl groups; [PTHR12989:SF10] ALPHA-1,2-GLUCOSYLTRANSFERASE ALG10; [GO:0016021] integral to membrane; [KOG2642] Alpha-1,2 glucosyltransferase/transcriptional activator; [K03850] alpha-1,2-glucosyltransferase [EC:2.4.1.-]; [2.4.1.-] Hexosyltransferases.55.860.7785
48 Mapoly0006s0074 [PTHR19353:SF15] DELTA-6 FATTY ACID DESATURASE; [PTHR19353] FATTY ACID DESATURASE 2; [GO:0020037] heme binding; [PF00487] Fatty acid desaturase; [KOG4232] Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase; [PF00173] Cytochrome b5-like Heme/Steroid binding domain; [GO:0006629] lipid metabolic process58.140.7531
49 Mapoly0020s0144 [K11266] MAternally affected uncoordination; [PTHR21394] UNCHARACTERIZED; [PF10345] Cohesin loading factor; [KOG2300] Uncharacterized conserved protein59.320.6923
50 Mapoly0061s0042 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF90] UNCHARACTERIZED MITOCHONDRIAL CARRIER C4G8.08; [KOG0752] Mitochondrial solute carrier protein60.070.7090
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