Guide Gene

Gene ID
Mapoly0165s0013
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0005515] protein binding; [PTHR22844] F-BOX AND WD40 DOMAIN PROTEIN; [KOG0274] Cdc4 and related F-box and WD-40 proteins; [GO:0046872] metal ion binding; [PF00400] WD domain, G-beta repeat

Coexpressed Gene List

Search : Show :

Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0165s0013 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0005515] protein binding; [PTHR22844] F-BOX AND WD40 DOMAIN PROTEIN; [KOG0274] Cdc4 and related F-box and WD-40 proteins; [GO:0046872] metal ion binding; [PF00400] WD domain, G-beta repeat 0.00 1.0000
1 Mapoly0113s0058 [PTHR31307] FAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain1.000.7958
2 Mapoly0069s0004 [KOG0227] Splicing factor 3a, subunit 2; [K12826] splicing factor 3A subunit 2; [PF12874] Zinc-finger of C2H2 type; [PTHR23205:SF0] SUBFAMILY NOT NAMED; [PTHR23205] SPLICING FACTOR 3A SUBUNIT 22.000.7478
3 Mapoly0051s0029 [PTHR12735] BOLA-LIKE PROTEIN-RELATED; [KOG2313] Stress-induced protein UVI31+; [PF13837] Myb/SANT-like DNA-binding domain; [PF01722] BolA-like protein2.450.7621
4 Mapoly0003s0196 [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0005515] protein binding; [PTHR16079] UBIQUITIN LIGASE PROTEIN CHFR; [GO:0046872] metal ion binding; [PF00498] FHA domain; [PTHR16079:SF2] gb def: F16N3.153.740.7731
5 Mapoly0004s0280 [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family; [PTHR10992:SF238] HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN7.140.7099
6 Mapoly0004s0242 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain9.490.7437
7 Mapoly0061s0042 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF90] UNCHARACTERIZED MITOCHONDRIAL CARRIER C4G8.08; [KOG0752] Mitochondrial solute carrier protein11.000.7291
8 Mapoly0014s0119 [GO:0006355] regulation of transcription, DNA-dependent; [K11308] histone acetyltransferase MYST1 [EC:2.3.1.48]; [PF11717] RNA binding activity-knot of a chromodomain; [PTHR10615] HISTONE ACETYLTRANSFERASE; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [GO:0005634] nucleus; [PF01853] MOZ/SAS family; [2.3.1.48] Histone acetyltransferase.; [KOG2747] Histone acetyltransferase (MYST family)13.420.7411
9 Mapoly0037s0072 [GO:0005515] protein binding; [PTHR21712] UNCHARACTERIZED; [PF00498] FHA domain14.490.7409
10 Mapoly0043s0065 [KOG1534] Putative transcription factor FET5; [GO:0000166] nucleotide binding; [K06883] 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]; [PTHR21231] XPA-BINDING PROTEIN 1-RELATED; [PTHR21231:SF4] PRYA1876; [PF03029] Conserved hypothetical ATP binding protein15.000.7121
11 Mapoly0037s0047 [K11416] mono-ADP-ribosyltransferase sirtuin 6 [EC:2.4.2.31]; [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [2.4.2.31] NAD(+)--protein-arginine ADP-ribosyltransferase.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [KOG1905] Class IV sirtuins (SIR2 family)17.660.7173
12 Mapoly0057s0088 [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [KOG1294] Apurinic/apyrimidinic endonuclease and related enzymes; [GO:0006281] DNA repair; [K10771] AP endonuclease 1 [EC:4.2.99.18]; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE22.450.7278
13 Mapoly0005s0244 [KOG4536] Predicted membrane protein; [PF10160] Predicted membrane protein; [PTHR15876] FAMILY NOT NAMED24.370.6976
14 Mapoly0097s0048 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [K08869] aarF domain-containing kinase24.490.7405
15 Mapoly0048s0028 [PF00149] Calcineurin-like phosphoesterase; [PTHR14795] HELICASE RELATED; [GO:0016787] hydrolase activity24.900.7320
16 Mapoly0002s0089 [PTHR23054] UNCHARACTERIZED; [PF04784] Protein of unknown function, DUF547; [PF14389] Leucine-zipper of ternary complex factor MIP124.980.6696
17 Mapoly0113s0040 [GO:0030975] thiamine binding; [GO:0005524] ATP binding; [2.7.6.2] Thiamine diphosphokinase.; [GO:0009229] thiamine diphosphate biosynthetic process; [KOG3153] Thiamine pyrophosphokinase; [K00949] thiamine pyrophosphokinase [EC:2.7.6.2]; [GO:0004788] thiamine diphosphokinase activity; [PF04265] Thiamin pyrophosphokinase, vitamin B1 binding domain; [PTHR13622] THIAMIN PYROPHOSPHOKINASE; [PF04263] Thiamin pyrophosphokinase, catalytic domain27.330.6482
18 Mapoly0019s0089 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process28.840.5659
19 Mapoly0004s0132 -29.240.7028
20 Mapoly0052s0071 [GO:0003951] NAD+ kinase activity; [KOG2178] Predicted sugar kinase; [2.7.1.23] NAD(+) kinase.; [GO:0006741] NADP biosynthetic process; [PTHR20275:SF0] SUBFAMILY NOT NAMED; [K00858] NAD+ kinase [EC:2.7.1.23]; [GO:0008152] metabolic process; [PTHR20275] FAMILY NOT NAMED; [PF01513] ATP-NAD kinase29.500.6885
21 Mapoly0010s0002 [GO:0016020] membrane; [KOG2431] 1, 2-alpha-mannosidase; [K01230] mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]; [PTHR11742:SF7] ENDOPLASMIC RETICULUM MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0005509] calcium ion binding; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [PF01532] Glycosyl hydrolase family 47; [3.2.1.113] Mannosyl-oligosaccharide 1,2-alpha-mannosidase.32.530.6719
22 Mapoly0055s0101 [KOG3298] DNA-directed RNA polymerase subunit E'; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [PTHR12709:SF3] RNA POLYMERASE RPB7, N-TERMINAL DOMAIN CONTAINING PROTEIN; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III36.660.7001
23 Mapoly0065s0036 [GO:0005737] cytoplasm; [GO:0017183] peptidyl-diphthamide biosynthetic process from peptidyl-histidine; [PF01866] Putative diphthamide synthesis protein; [PTHR10762:SF2] DIPHTHAMIDE BIOSYNTHESIS PROTEIN 2 (DPH2 HOMOLOG); [PTHR10762] DIPHTHAMIDE BIOSYNTHESIS PROTEIN38.070.6591
24 Mapoly0014s0084 -38.540.6840
25 Mapoly0001s0121 [PF00641] Zn-finger in Ran binding protein and others; [PTHR23238] RNA BINDING PROTEIN; [KOG1995] Conserved Zn-finger protein; [GO:0008270] zinc ion binding39.600.7103
26 Mapoly0093s0081 [PF10218] Uncharacterized conserved protein (DUF2054); [PF15024] Glycosyltransferase family 18; [PTHR13481] UNCHARACTERIZED45.890.6911
27 Mapoly0102s0012 [KOG0553] TPR repeat-containing protein; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00515] Tetratricopeptide repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN46.320.6646
28 Mapoly0052s0047 [PF03556] Cullin binding; [PTHR12281] RP42 RELATED47.290.6926
29 Mapoly0006s0086 [GO:0016021] integral to membrane; [PF02990] Endomembrane protein 70; [KOG1277] Endosomal membrane proteins, EMP70; [PTHR10766] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN; [PTHR10766:SF14] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN MEMBER 148.290.6728
30 Mapoly0020s0071 [GO:0006784] heme a biosynthetic process; [KOG2725] Cytochrome oxidase assembly factor COX15; [GO:0055114] oxidation-reduction process; [GO:0016021] integral to membrane; [PF02628] Cytochrome oxidase assembly protein; [PTHR23289] CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15; [K02259] cytochrome c oxidase subunit XV assembly protein; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors50.160.6200
31 Mapoly0002s0172 [PF13837] Myb/SANT-like DNA-binding domain51.670.6881
32 Mapoly0002s0022 -53.670.7059
33 Mapoly0177s0019 [KOG0149] Predicted RNA-binding protein SEB4 (RRM superfamily); [PF01480] PWI domain; [PTHR23365] POLY-A BINDING PROTEIN 2; [GO:0006397] mRNA processing; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)55.960.7326
34 Mapoly0141s0028 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF06839] GRF zinc finger; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding57.010.6575
35 Mapoly0148s0013 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [PF10607] CTLH/CRA C-terminal to LisH motif domain; [KOG2659] LisH motif-containing protein57.600.7132
36 Mapoly0019s0071 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain59.800.6946
37 Mapoly0129s0023 [PTHR11635] CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN; [PF00027] Cyclic nucleotide-binding domain60.790.6778
38 Mapoly0002s0276 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG1001] Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily; [PF00271] Helicase conserved C-terminal domain61.940.6891
39 Mapoly0003s0199 [KOG4723] Uncharacterized conserved protein; [PTHR16184] FAMILY NOT NAMED; [PF09807] Uncharacterized conserved protein (DUF2348)63.250.7022
40 Mapoly0006s0068 [KOG3219] Transcription initiation factor TFIID, subunit TAF11; [PTHR13218] FAMILY NOT NAMED; [GO:0005634] nucleus; [K03135] transcription initiation factor TFIID subunit 11; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PF04719] hTAFII28-like protein conserved region66.450.6067
41 Mapoly0190s0007 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase67.450.6810
42 Mapoly0053s0006 [GO:0000287] magnesium ion binding; [PTHR24092] FAMILY NOT NAMED; [GO:0005524] ATP binding; [PF12710] haloacid dehalogenase-like hydrolase; [KOG0206] P-type ATPase; [GO:0000166] nucleotide binding; [GO:0015914] phospholipid transport; [GO:0016021] integral to membrane; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [GO:0004012] phospholipid-translocating ATPase activity68.150.6792
43 Mapoly0105s0006 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0870] DNA polymerase epsilon, subunit D69.070.6693
44 Mapoly0022s0039 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG0643] Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1); [PF00400] WD domain, G-beta repeat70.460.6562
45 Mapoly0001s0420 [PTHR16212:SF4] SUBFAMILY NOT NAMED; [PF12530] Protein of unknown function (DUF3730); [PTHR16212] FAMILY NOT NAMED72.110.6711
46 Mapoly0080s0014 [PTHR12786:SF1] UNCHARACTERIZED; [PTHR12786] SPLICING FACTOR SF3A-RELATED; [PF13019] Telomere stability and silencing77.460.6276
47 Mapoly0113s0054 [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [3.5.1.-] In linear amides.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [K11415] NAD-dependent deacetylase sirtuin 5 [EC:3.5.1.-]; [KOG2683] Sirtuin 4 and related class II sirtuins (SIR2 family)77.460.6487
48 Mapoly0056s0032 [KOG1222] Kinesin associated protein KAP; [PTHR15605:SF2] KINESIN-ASSOCIATED PROTEIN 3; [PF05804] Kinesin-associated protein (KAP); [GO:0005871] kinesin complex; [PTHR15605] KINESIN-ASSOCIATED PROTEINS; [GO:0019894] kinesin binding80.740.6779
49 Mapoly0004s0265 -80.780.6511
50 Mapoly0042s0037 [PTHR13904] PRE-MRNA SPLICING FACTOR PRP31; [PF01798] Putative snoRNA binding domain; [GO:0046540] U4/U6 x U5 tri-snRNP complex; [KOG2574] mRNA splicing factor PRP31; [PF08060] NOSIC (NUC001) domain; [PF09785] Prp31 C terminal domain; [GO:0000244] assembly of spliceosomal tri-snRNP; [GO:0000398] mRNA splicing, via spliceosome; [K12844] U4/U6 small nuclear ribonucleoprotein PRP3182.900.6489
Showing 1 to 50 of 200 records
S