Guide Gene

Gene ID
Mapoly0006s0254
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR13026:SF0] SUBFAMILY NOT NAMED; [PTHR13026] NNP-1 PROTEIN (NOVEL NUCLEAR PROTEIN 1) (NOP52); [GO:0030688] preribosome, small subunit precursor; [PF05997] Nucleolar protein,Nop52; [GO:0006364] rRNA processing

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0476 [K01714] dihydrodipicolinate synthase [EC:4.2.1.52]; [GO:0016829] lyase activity; [4.2.1.52] Transferred entry: 4.3.3.7.; [PTHR12128:SF15] DIHYDRODIPICOLINATE SYNTHASE; [GO:0008152] metabolic process; [PTHR12128] DIHYDRODIPICOLINATE SYNTHASE; [PF00701] Dihydrodipicolinate synthetase family
Mapoly0006s0183 [PF03465] eRF1 domain 3; [KOG0688] Peptide chain release factor 1 (eRF1); [K03265] peptide chain release factor eRF subunit 1; [GO:0005737] cytoplasm; [PF03463] eRF1 domain 1; [PTHR10113] PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1; [PF03464] eRF1 domain 2; [GO:0006415] translational termination; [GO:0016149] translation release factor activity, codon specific
Mapoly0006s0254 [PTHR13026:SF0] SUBFAMILY NOT NAMED; [PTHR13026] NNP-1 PROTEIN (NOVEL NUCLEAR PROTEIN 1) (NOP52); [GO:0030688] preribosome, small subunit precursor; [PF05997] Nucleolar protein,Nop52; [GO:0006364] rRNA processing
Mapoly0007s0098 [GO:0005524] ATP binding; [KOG0742] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23075] PUTATIVE ATP-ASE; [PF12037] Domain of unknown function (DUF3523)
Mapoly0011s0174 [KOG2967] Uncharacterized conserved protein; [PTHR13563] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING; [PTHR13563:SF6] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING 2; [PF01746] tRNA (Guanine-1)-methyltransferase
Mapoly0012s0037 [PTHR11751:SF22] AMINOTRANSFERASE RELATED; [GO:0009058] biosynthetic process; [K10206] LL-diaminopimelate aminotransferase [EC:2.6.1.83]; [GO:0030170] pyridoxal phosphate binding; [2.6.1.83] LL-diaminopimelate aminotransferase.; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0010285] L,L-diaminopimelate aminotransferase activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED
Mapoly0015s0089 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [3.6.4.13] RNA helicase.; [K11594] ATP-dependent RNA helicase [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PTHR24031:SF9] HELICASE CONSERVED C-TERMINAL DOMAIN, PUTATIVE; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding
Mapoly0024s0107 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [K03350] anaphase-promoting complex subunit 3; [KOG1126] DNA-binding cell division cycle control protein; [PF13181] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF11] CELL DIVISION CYCLE 27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 3
Mapoly0026s0084 [GO:0003723] RNA binding; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [KOG1596] Fibrillarin and related nucleolar RNA-binding proteins; [PF01269] Fibrillarin; [GO:0006364] rRNA processing; [GO:0008033] tRNA processing; [K14563] rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]; [PTHR10335] RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN
Mapoly0032s0021 [KOG2555] AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase; [PF01808] AICARFT/IMPCHase bienzyme; [PTHR11692] BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN; [GO:0003937] IMP cyclohydrolase activity; [PF02142] MGS-like domain; [GO:0004643] phosphoribosylaminoimidazolecarboxamide formyltransferase activity; [3.5.4.10] IMP cyclohydrolase.; [GO:0006164] purine nucleotide biosynthetic process; [2.1.2.3] Phosphoribosylaminoimidazolecarboxamide formyltransferase.; [K00602] phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Mapoly0035s0137 [GO:0005643] nuclear pore; [PTHR10350:SF6] NUCLEOPORIN 155; [PF03177] Non-repetitive/WGA-negative nucleoporin C-terminal; [K14312] nuclear pore complex protein Nup155; [KOG1900] Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170); [GO:0006913] nucleocytoplasmic transport; [PF08801] Nup133 N terminal like; [GO:0017056] structural constituent of nuclear pore; [PTHR10350] NUCLEAR PORE COMPLEX PROTEIN NUP155
Mapoly0038s0028 [6.3.4.5] Argininosuccinate synthase.; [GO:0005524] ATP binding; [PF00764] Arginosuccinate synthase; [GO:0004055] argininosuccinate synthase activity; [GO:0006526] arginine biosynthetic process; [PTHR11587] ARGININOSUCCINATE SYNTHASE; [KOG1706] Argininosuccinate synthase; [K01940] argininosuccinate synthase [EC:6.3.4.5]
Mapoly0045s0011 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PF01588] Putative tRNA binding domain; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0000049] tRNA binding; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG1247] Methionyl-tRNA synthetase
Mapoly0047s0039 [PTHR31027] FAMILY NOT NAMED
Mapoly0061s0018 [KOG2318] Uncharacterized conserved protein; [GO:0005634] nucleus; [PF08159] NUC153 domain; [PTHR12202] UNCHARACTERIZED
Mapoly0079s0051 [PF13414] TPR repeat; [K00670] peptide alpha-N-acetyltransferase [EC:2.3.1.88]; [KOG1156] N-terminal acetyltransferase; [2.3.1.88] Peptide alpha-N-acetyltransferase.; [PTHR22767:SF2] N-TERMINAL ACETLYTRANSFERASE-RELATED; [PF12569] NMDA receptor-regulated protein 1; [PTHR22767] N-TERMINAL ACETLYTRANSFERASE-RELATED
Mapoly0090s0010 [K04567] lysyl-tRNA synthetase, class II [EC:6.1.1.6]; [GO:0005524] ATP binding; [PTHR22594:SF4] LYSYL-TRNA SYNTHETASE; [6.1.1.6] Lysine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [KOG1885] Lysyl-tRNA synthetase (class II); [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)
Mapoly0114s0007 [KOG0724] Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09522] DnaJ homolog subfamily C member 2
Mapoly0125s0035 [PTHR23081] RNA POLYMERASE II CTD PHOSPHATASE; [PF00035] Double-stranded RNA binding motif; [PF03031] NLI interacting factor-like phosphatase; [GO:0005515] protein binding; [PTHR23081:SF1] RNA POLYMERASE II CTD PHOSPHATASE
Mapoly0132s0010 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0004815] aspartate-tRNA ligase activity; [GO:0005737] cytoplasm; [GO:0006422] aspartyl-tRNA aminoacylation; [6.1.1.12] Aspartate--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [KOG0556] Aspartyl-tRNA synthetase; [PTHR22594:SF10] SUBFAMILY NOT NAMED; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)
Mapoly0132s0028 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [KOG1653] Single-stranded DNA-binding protein; [PF00436] Single-strand binding protein family; [K03111] single-strand DNA-binding protein