Guide Gene

Gene ID
Mapoly0015s0089
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [3.6.4.13] RNA helicase.; [K11594] ATP-dependent RNA helicase [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PTHR24031:SF9] HELICASE CONSERVED C-TERMINAL DOMAIN, PUTATIVE; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0481 [KOG1190] Polypyrimidine tract-binding protein; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PTHR11546] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
Mapoly0006s0254 [PTHR13026:SF0] SUBFAMILY NOT NAMED; [PTHR13026] NNP-1 PROTEIN (NOVEL NUCLEAR PROTEIN 1) (NOP52); [GO:0030688] preribosome, small subunit precursor; [PF05997] Nucleolar protein,Nop52; [GO:0006364] rRNA processing
Mapoly0011s0174 [KOG2967] Uncharacterized conserved protein; [PTHR13563] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING; [PTHR13563:SF6] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING 2; [PF01746] tRNA (Guanine-1)-methyltransferase
Mapoly0015s0081 [PF11707] Ribosome 60S biogenesis N-terminal; [PTHR13500] NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1
Mapoly0015s0089 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [3.6.4.13] RNA helicase.; [K11594] ATP-dependent RNA helicase [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PTHR24031:SF9] HELICASE CONSERVED C-TERMINAL DOMAIN, PUTATIVE; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding
Mapoly0023s0143 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PTHR23073:SF18] SUBFAMILY NOT NAMED; [PF00004] ATPase family associated with various cellular activities (AAA)
Mapoly0024s0107 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [K03350] anaphase-promoting complex subunit 3; [KOG1126] DNA-binding cell division cycle control protein; [PF13181] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF11] CELL DIVISION CYCLE 27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 3
Mapoly0035s0137 [GO:0005643] nuclear pore; [PTHR10350:SF6] NUCLEOPORIN 155; [PF03177] Non-repetitive/WGA-negative nucleoporin C-terminal; [K14312] nuclear pore complex protein Nup155; [KOG1900] Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170); [GO:0006913] nucleocytoplasmic transport; [PF08801] Nup133 N terminal like; [GO:0017056] structural constituent of nuclear pore; [PTHR10350] NUCLEAR PORE COMPLEX PROTEIN NUP155
Mapoly0038s0024 [PTHR19878] AUTOPHAGY PROTEIN 16-LIKE
Mapoly0038s0028 [6.3.4.5] Argininosuccinate synthase.; [GO:0005524] ATP binding; [PF00764] Arginosuccinate synthase; [GO:0004055] argininosuccinate synthase activity; [GO:0006526] arginine biosynthetic process; [PTHR11587] ARGININOSUCCINATE SYNTHASE; [KOG1706] Argininosuccinate synthase; [K01940] argininosuccinate synthase [EC:6.3.4.5]
Mapoly0047s0039 [PTHR31027] FAMILY NOT NAMED
Mapoly0061s0018 [KOG2318] Uncharacterized conserved protein; [GO:0005634] nucleus; [PF08159] NUC153 domain; [PTHR12202] UNCHARACTERIZED
Mapoly0066s0036 [PTHR21567:SF9] GB DEF: HYPOTHETICAL PROTEIN AT2G20190; [PF12348] CLASP N terminal; [PF13513] HEAT-like repeat; [PTHR21567] CLASP
Mapoly0070s0053 [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF09382] RQC domain; [KOG0351] ATP-dependent DNA helicase; [3.6.4.12] DNA helicase.; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [GO:0005622] intracellular; [GO:0003676] nucleic acid binding; [K10901] bloom syndrome protein [EC:3.6.4.12]; [GO:0043140] ATP-dependent 3'-5' DNA helicase activity; [PF00570] HRDC domain
Mapoly0072s0011 [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [KOG1077] Vesicle coat complex AP-2, alpha subunit; [PF02883] Adaptin C-terminal domain; [PF02296] Alpha adaptin AP2, C-terminal domain; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [PTHR22780:SF4] ADAPTER-RELATED PROTEIN COMPLEX 2 ALPHA 1 SUBUNIT (ALPHA-ADAPTIN A); [K11824] AP-2 complex subunit alpha
Mapoly0079s0051 [PF13414] TPR repeat; [K00670] peptide alpha-N-acetyltransferase [EC:2.3.1.88]; [KOG1156] N-terminal acetyltransferase; [2.3.1.88] Peptide alpha-N-acetyltransferase.; [PTHR22767:SF2] N-TERMINAL ACETLYTRANSFERASE-RELATED; [PF12569] NMDA receptor-regulated protein 1; [PTHR22767] N-TERMINAL ACETLYTRANSFERASE-RELATED
Mapoly0090s0010 [K04567] lysyl-tRNA synthetase, class II [EC:6.1.1.6]; [GO:0005524] ATP binding; [PTHR22594:SF4] LYSYL-TRNA SYNTHETASE; [6.1.1.6] Lysine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [KOG1885] Lysyl-tRNA synthetase (class II); [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)
Mapoly0091s0014 [PTHR12596:SF1] GB DEF: T27C4.14 PROTEIN; [PTHR12596] EXPORTIN 4,7-RELATED; [KOG4541] Nuclear transport receptor exportin 4 (importin beta superfamily)
Mapoly0114s0007 [KOG0724] Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09522] DnaJ homolog subfamily C member 2
Mapoly0125s0035 [PTHR23081] RNA POLYMERASE II CTD PHOSPHATASE; [PF00035] Double-stranded RNA binding motif; [PF03031] NLI interacting factor-like phosphatase; [GO:0005515] protein binding; [PTHR23081:SF1] RNA POLYMERASE II CTD PHOSPHATASE
Mapoly0135s0025 [PF13513] HEAT-like repeat; [GO:0005515] protein binding; [PTHR23346] TRANSLATIONAL ACTIVATOR GCN1-RELATED; [PF02985] HEAT repeat; [PTHR23346:SF7] TRANSLATIONAL ACTIVATOR GCN1-RELATED; [PF12074] Domain of unknown function (DUF3554); [KOG1242] Protein containing adaptin N-terminal region; [PF13646] HEAT repeats