Guide Gene

Gene ID
Mapoly0006s0078
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005515] protein binding; [PTHR10253] POLYCOMB PROTEIN; [KOG1034] Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily; [K11462] polycomb protein EED; [PF00400] WD domain, G-beta repeat

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0006s0078 [GO:0005515] protein binding; [PTHR10253] POLYCOMB PROTEIN; [KOG1034] Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily; [K11462] polycomb protein EED; [PF00400] WD domain, G-beta repeat 0.00 1.0000
1 Mapoly0023s0050 [PF11559] Afadin- and alpha -actinin-Binding; [PTHR21736] VERNALIZATION-INSENSITIVE PROTEIN 32.240.8532
2 Mapoly0074s0069 -2.650.8049
3 Mapoly0007s0013 [PF01466] Skp1 family, dimerisation domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03094] S-phase kinase-associated protein 1; [KOG1724] SCF ubiquitin ligase, Skp1 component; [PTHR11165] SKP1; [PF03931] Skp1 family, tetramerisation domain2.830.8181
4 Mapoly0011s0080 [KOG2315] Predicted translation initiation factor related to eIF-3a; [PTHR13227] NUCLEASE-RELATED; [PF08662] Eukaryotic translation initiation factor eIF2A3.460.8005
5 Mapoly0100s0038 [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0098] GTPase Rab2, small G protein superfamily; [PF15305] Intraflagellar transport protein 43; [PF00071] Ras family; [GO:0005525] GTP binding; [GO:0030991] intraflagellar transport particle A6.630.8021
6 Mapoly0081s0083 [GO:0005524] ATP binding; [PTHR24054] CASEIN KINASE II SUBUNIT ALPHA; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [K03097] casein kinase II subunit alpha [EC:2.7.11.1]; [GO:0006468] protein phosphorylation; [KOG0668] Casein kinase II, alpha subunit6.710.7960
7 Mapoly0036s0154 [KOG2606] OTU (ovarian tumor)-like cysteine protease; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PTHR12419:SF10] gb def: ENSANGP00000019868 (Fragment); [PF02338] OTU-like cysteine protease7.140.8330
8 Mapoly0005s0205 [PF00226] DnaJ domain; [KOG0719] Molecular chaperone (DnaJ superfamily); [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER7.210.8402
9 Mapoly0043s0062 [GO:0003677] DNA binding; [GO:0006284] base-excision repair; [PTHR10359] A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III; [PF14815] NUDIX domain; [K03575] A/G-specific adenine glycosylase [EC:3.2.2.-]; [KOG1921] Endonuclease III; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [PF00633] Helix-hairpin-helix motif; [3.2.2.-] Hydrolyzing N-glycosyl compounds.7.480.7965
10 Mapoly0004s0213 [PF03215] Rad17 cell cycle checkpoint protein; [GO:0005634] nucleus; [GO:0006281] DNA repair; [PTHR12172] CELL CYCLE CHECKPOINT PROTEIN RAD17; [KOG1970] Checkpoint RAD17-RFC complex, RAD17/RAD24 component; [PTHR12172:SF0] SUBFAMILY NOT NAMED; [K06662] cell cycle checkpoint protein; [GO:0007049] cell cycle9.490.8033
11 Mapoly0005s0080 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0794] CDK8 kinase-activating protein cyclin C; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity14.490.7675
12 Mapoly0036s0142 [GO:0003677] DNA binding; [KOG1757] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H416.060.8050
13 Mapoly0001s0009 [PTHR10540:SF7] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7; [GO:0005515] protein binding; [PF13012] Maintenance of mitochondrial structure and function; [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1556] 26S proteasome regulatory complex, subunit RPN8/PSMD7; [K03038] 26S proteasome regulatory subunit N817.030.8095
14 Mapoly0116s0028 [PTHR23074:SF19] KATANIN-RELATED; [GO:0005524] ATP binding; [3.6.4.3] Microtubule-severing ATPase.; [K07767] microtubule-severing ATPase [EC:3.6.4.3]; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0738] AAA+-type ATPase; [PTHR23074] AAA ATPASE; [PF09336] Vps4 C terminal oligomerisation domain17.290.7813
15 Mapoly0038s0098 [K03351] anaphase-promoting complex subunit 4; [PF12896] Anaphase-promoting complex, cyclosome, subunit 4; [KOG4640] Anaphase-promoting complex (APC), subunit 4; [GO:0030071] regulation of mitotic metaphase/anaphase transition; [PF12894] Anaphase-promoting complex subunit 4 WD40 domain; [PTHR13260] ANAPHASE PROMOTING COMPLEX SUBUNIT 4 (APC4) (CYCLOSOME SUBUNIT 4); [GO:0005680] anaphase-promoting complex; [GO:0031145] anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process17.750.7624
16 Mapoly0059s0079 [KOG2014] SMT3/SUMO-activating complex, AOS1/RAD31 component; [PF00899] ThiF family; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [K10684] ubiquitin-like 1-activating enzyme E1 A [EC:6.3.2.19]18.970.8045
17 Mapoly0011s0083 [PTHR10997] IMPORTIN-7, 8, 1120.620.7947
18 Mapoly0061s0107 [GO:0003677] DNA binding; [KOG0483] Transcription factor HEX, contains HOX and HALZ domains; [PF00046] Homeobox domain; [PF08670] MEKHLA domain; [PF01852] START domain; [PTHR24326] FAMILY NOT NAMED; [GO:0008289] lipid binding; [K09338] homeobox-leucine zipper protein21.630.7575
19 Mapoly0099s0054 [GO:0035064] methylated histone residue binding; [PTHR10333] INHIBITOR OF GROWTH PROTEIN; [PF12998] Inhibitor of growth proteins N-terminal histone-binding; [PF00628] PHD-finger; [GO:0005515] protein binding; [KOG1973] Chromatin remodeling protein, contains PHD Zn-finger; [GO:0016568] chromatin modification; [GO:0005634] nucleus28.000.7469
20 Mapoly0042s0032 [PF13259] Protein of unknown function (DUF4050)29.330.7895
21 Mapoly0152s0004 [PTHR12460] CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN; [PTHR12460:SF4] SUBFAMILY NOT NAMED; [PF04818] RNA polymerase II-binding domain.; [KOG2669] Regulator of nuclear mRNA30.980.7784
22 Mapoly0069s0082 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding31.110.7819
23 Mapoly0001s0064 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0008173] RNA methyltransferase activity; [PTHR12029] RNA METHYLTRANSFERASE; [KOG0838] RNA Methylase, SpoU family; [PF00588] SpoU rRNA Methylase family31.420.7826
24 Mapoly0024s0100 [GO:0005524] ATP binding; [PTHR11669] REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; [KOG0990] Replication factor C, subunit RFC5; [PF00004] ATPase family associated with various cellular activities (AAA); [PF08542] Replication factor C C-terminal domain; [K10756] replication factor C subunit 3/534.180.7956
25 Mapoly0091s0013 [GO:0003723] RNA binding; [KOG2202] U2 snRNP splicing factor, small subunit, and related proteins; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12620] U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT; [GO:0005634] nucleus; [K12836] splicing factor U2AF 35 kDa subunit; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0046872] metal ion binding34.470.7924
26 Mapoly0012s0100 [PF01564] Spermine/spermidine synthase; [PTHR11558] SPERMIDINE/SPERMINE SYNTHASE; [KOG1562] Spermidine synthase; [2.5.1.16] Spermidine synthase.; [GO:0003824] catalytic activity; [K00797] spermidine synthase [EC:2.5.1.16]34.770.7073
27 Mapoly0091s0017 [GO:0005515] protein binding; [PTHR22937] RING FINGER CONTAINING PROTEIN; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [KOG2177] Predicted E3 ubiquitin ligase; [K11985] TRAF-interacting protein36.740.7499
28 Mapoly0066s0004 [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [KOG0496] Beta-galactosidase; [GO:0005975] carbohydrate metabolic process; [PF02140] Galactose binding lectin domain; [GO:0030246] carbohydrate binding; [PTHR23421] BETA-GALACTOSIDASE RELATED; [PF01301] Glycosyl hydrolases family 3537.150.7373
29 Mapoly0115s0039 [KOG1780] Small Nuclear ribonucleoprotein G; [K11099] small nuclear ribonucleoprotein G; [PF01423] LSM domain; [PTHR10553] SMALL NUCLEAR RIBONUCLEOPROTEIN39.460.8035
30 Mapoly0087s0074 [GO:0005685] U1 snRNP; [PF06220] U1 zinc finger; [GO:0008270] zinc ion binding; [GO:0000398] mRNA splicing, via spliceosome; [KOG3454] U1 snRNP-specific protein C; [GO:0000387] spliceosomal snRNP assembly; [PTHR31148] FAMILY NOT NAMED40.000.7763
31 Mapoly0056s0016 [PTHR11359] AMP DEAMINASE; [PF00962] Adenosine/AMP deaminase; [GO:0032264] IMP salvage; [K01490] AMP deaminase [EC:3.5.4.6]; [GO:0019239] deaminase activity; [GO:0003876] AMP deaminase activity; [3.5.4.6] AMP deaminase.; [KOG1096] Adenosine monophosphate deaminase40.580.7371
32 Mapoly0013s0048 [KOG0381] HMG box-containing protein; [PF00505] HMG (high mobility group) box; [PTHR13711] SWI/SNF-RELATED CHROMATIN BINDING PROTEIN40.890.7916
33 Mapoly0014s0097 [PF13414] TPR repeat; [KOG1308] Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein; [PTHR22904:SF34] HSC70-INTERACTING PROTEIN; [PTHR22904] TPR REPEAT CONTAINING PROTEIN40.910.7712
34 Mapoly0011s0143 [PTHR15481:SF0] SUBFAMILY NOT NAMED; [K14325] RNA-binding protein with serine-rich domain 1; [PTHR15481] RIBONUCLEIC ACID BINDING PROTEIN S1; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)41.420.7755
35 Mapoly0046s0091 [GO:0000278] mitotic cell cycle; [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [KOG1427] Uncharacterized conserved protein, contains RCC1 domain; [PF00415] Regulator of chromosome condensation (RCC1) repeat; [GO:0051301] cell division; [GO:0007032] endosome organization41.950.7650
36 Mapoly0001s0022 [GO:0016020] membrane; [GO:0055085] transmembrane transport; [PTHR30566] YNAI-RELATED MECHANOSENSITIVE ION CHANNEL; [PF00924] Mechanosensitive ion channel42.710.7385
37 Mapoly0144s0027 [PTHR12872] ALPHA-N-ACETYLGLUCOSAMINIDASE; [KOG2233] Alpha-N-acetylglucosaminidase; [PF05089] Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; [K01205] alpha-N-acetylglucosaminidase [EC:3.2.1.50]; [3.2.1.50] Alpha-N-acetylglucosaminidase.; [PF12972] Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain; [PF12971] Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain43.360.7495
38 Mapoly0083s0062 [K09553] stress-induced-phosphoprotein 1; [GO:0005515] protein binding; [PF13414] TPR repeat; [KOG0548] Molecular co-chaperone STI1; [PF00515] Tetratricopeptide repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN44.720.7186
39 Mapoly0028s0075 [GO:0003677] DNA binding; [KOG1756] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H445.320.7993
40 Mapoly0109s0009 [K03574] 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]; [GO:0016787] hydrolase activity; [PTHR22769] MUTT/NUDIX HYDROLASE; [3.6.1.-] In phosphorous-containing anhydrides.; [PF00293] NUDIX domain45.890.7203
41 Mapoly0078s0038 [GO:0031072] heat shock protein binding; [KOG0712] Molecular chaperone (DnaJ superfamily); [PTHR24076:SF1] SUBFAMILY NOT NAMED; [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding47.170.7109
42 Mapoly0109s0037 [KOG1327] Copine; [PF00168] C2 domain; [PTHR10857] COPINE; [PF07002] Copine; [GO:0005515] protein binding47.490.7561
43 Mapoly0237s0001 [PTHR10687:SF2] SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN; [GO:0016021] integral to membrane; [GO:0015031] protein transport; [PF04144] SCAMP family; [PTHR10687] SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN (SCAMP)48.580.6346
44 Mapoly0125s0043 [PTHR22601] ISP4 LIKE PROTEIN; [GO:0055085] transmembrane transport; [KOG2262] Sexual differentiation process protein ISP4; [PF03169] OPT oligopeptide transporter protein50.300.6962
45 Mapoly0095s0052 [PF08839] DNA replication factor CDT1 like50.420.7675
46 Mapoly0011s0077 [PTHR23419:SF0] SUBFAMILY NOT NAMED; [KOG3338] Divalent cation tolerance-related protein; [GO:0010038] response to metal ion; [PF03091] CutA1 divalent ion tolerance protein; [K03926] periplasmic divalent cation tolerance protein; [PTHR23419] DIVALENT CATION TOLERANCE CUTA-RELATED50.750.7698
47 Mapoly0007s0006 [PTHR21068] FAMILY NOT NAMED; [PTHR21068:SF3] GB DEF: HYPOTHETICAL PROTEIN50.790.6443
48 Mapoly0124s0012 [KOG2518] 5'-3' exonuclease; [PF00752] XPG N-terminal domain; [PF00867] XPG I-region; [K10746] exonuclease 1 [EC:3.1.-.-]; [GO:0006281] DNA repair; [GO:0004518] nuclease activity; [PTHR11081:SF8] EXONUCLEASE 1; [3.1.-.-] Acting on ester bonds.; [PTHR11081] XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY50.910.6844
49 Mapoly0014s0224 [GO:0003677] DNA binding; [PTHR31251] FAMILY NOT NAMED; [GO:0005634] nucleus; [PF03110] SBP domain51.620.7315
50 Mapoly0010s0062 [KOG2250] Glutamate/leucine/phenylalanine/valine dehydrogenases; [GO:0055114] oxidation-reduction process; [PTHR11606] GLUTAMATE DEHYDROGENASE; [GO:0016491] oxidoreductase activity; [PF00208] Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; [K00262] glutamate dehydrogenase (NADP+) [EC:1.4.1.4]; [GO:0006520] cellular amino acid metabolic process; [PTHR11606:SF4] SUBFAMILY NOT NAMED; [1.4.1.4] Glutamate dehydrogenase (NADP(+)).; [PF02812] Glu/Leu/Phe/Val dehydrogenase, dimerisation domain51.830.7632
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