Guide Gene

Gene ID
Mapoly0002s0139
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR23338:SF16] U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM4; [K12623] U6 snRNA-associated Sm-like protein LSm4; [KOG3293] Small nuclear ribonucleoprotein (snRNP); [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0517 [KOG2743] Cobalamin synthesis protein; [PF07683] Cobalamin synthesis protein cobW C-terminal domain; [PTHR13748] COBW-RELATED; [PF02492] CobW/HypB/UreG, nucleotide-binding domain
Mapoly0002s0139 [PTHR23338:SF16] U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM4; [K12623] U6 snRNA-associated Sm-like protein LSm4; [KOG3293] Small nuclear ribonucleoprotein (snRNP); [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain
Mapoly0005s0172 [PTHR24322] FAMILY NOT NAMED; [K04708] 3-dehydrosphinganine reductase [EC:1.1.1.102]; [KOG1210] Predicted 3-ketosphinganine reductase; [1.1.1.102] 3-dehydrosphinganine reductase.; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase
Mapoly0009s0244 [PTHR13420:SF0] SUBFAMILY NOT NAMED; [PTHR13420] UNCHARACTERIZED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Mapoly0013s0130 [PF11221] Subunit 21 of Mediator complex; [PTHR13381] RNA POLYMERASE II HOLOENZYME COMPONENT SRB7; [KOG1510] RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB7
Mapoly0016s0167 [GO:0005515] protein binding; [PF13504] Leucine rich repeat; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN; [GO:0043531] ADP binding; [PF00931] NB-ARC domain
Mapoly0025s0134 [GO:0005737] cytoplasm; [K08336] autophagy-related protein 12; [KOG3439] Protein conjugation factor involved in autophagy; [PTHR13385] AUTOPHAGY PROTEIN 12; [GO:0000045] autophagic vacuole assembly; [PF04110] Ubiquitin-like autophagy protein Apg12
Mapoly0029s0154 [K02183] calmodulin; [PTHR23050] CALCIUM BINDING PROTEIN; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding; [KOG0027] Calmodulin and related proteins (EF-Hand superfamily)
Mapoly0033s0142 -
Mapoly0037s0066 [PTHR12771] ENGULFMENT AND CELL MOTILITY; [GO:0006909] phagocytosis; [GO:0005856] cytoskeleton; [PF04727] ELMO/CED-12 family
Mapoly0041s0098 [PTHR21354] UNCHARACTERIZED; [PTHR21354:SF0] SUBFAMILY NOT NAMED
Mapoly0059s0090 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein
Mapoly0063s0096 -
Mapoly0066s0045 [PF05773] RWD domain; [PTHR21275] UNCHARACTERIZED; [GO:0005515] protein binding; [KOG4018] Uncharacterized conserved protein, contains RWD domain
Mapoly0085s0034 -
Mapoly0090s0056 [GO:0030833] regulation of actin filament polymerization; [GO:0005515] protein binding; [KOG1523] Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC; [PTHR10709] ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1; [GO:0005856] cytoskeleton; [GO:0003779] actin binding; [PTHR10709:SF2] ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1; [K05757] actin related protein 2/3 complex, subunit 1A/1B; [PF00400] WD domain, G-beta repeat
Mapoly0093s0047 [PF01239] Protein prenyltransferase alpha subunit repeat; [2.5.1.58] Protein farnesyltransferase.; [GO:0008318] protein prenyltransferase activity; [GO:0018342] protein prenylation; [2.5.1.59] Protein geranylgeranyltransferase type I.; [K05955] protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [EC:2.5.1.58 2.5.1.59]; [PTHR11129] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT; [KOG0530] Protein farnesyltransferase, alpha subunit/protein geranylgeranyltransferase type I, alpha subunit; [PTHR11129:SF1] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT
Mapoly0116s0052 [GO:0030833] regulation of actin filament polymerization; [GO:0005515] protein binding; [KOG1523] Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC; [PTHR10709] ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1; [GO:0005856] cytoskeleton; [GO:0003779] actin binding; [PTHR10709:SF2] ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1; [K05757] actin related protein 2/3 complex, subunit 1A/1B; [PF00400] WD domain, G-beta repeat
Mapoly0118s0035 [PF07279] Protein of unknown function (DUF1442); [PTHR31096] FAMILY NOT NAMED
Mapoly0122s0004 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE
Mapoly0127s0015 [PTHR13214] FAMILY NOT NAMED; [GO:0008270] zinc ion binding; [PF06524] NOA36 protein; [GO:0005634] nucleus; [PTHR13214:SF1] gb def: similar to nucleolar cysteine-rich protein, zinc finger autoantigen 330 mus mus