Guide Gene

Gene ID
Mapoly0001s0306
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0306 [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 0.00 1.0000
1 Mapoly0001s0189 [PF06799] Protein of unknown function (DUF1230)1.000.9078
2 Mapoly0052s0091 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily3.160.8781
3 Mapoly0055s0060 [GO:0003743] translation initiation factor activity; [PF01253] Translation initiation factor SUI1; [GO:0006413] translational initiation5.480.8860
4 Mapoly0093s0079 -7.940.8303
5 Mapoly0006s0309 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [PTHR10293] GLUTAREDOXIN-RELATED PROTEIN8.310.8917
6 Mapoly0001s0114 [PF03629] Domain of unknown function (DUF303); [PTHR31988] FAMILY NOT NAMED8.770.8751
7 Mapoly1100s0002 [GO:0042254] ribosome biogenesis; [KOG1723] 60s ribosomal protein L30 isolog; [K02896] large subunit ribosomal protein L24e; [PF01246] Ribosomal protein L24e; [PTHR10792] 60S RIBOSOMAL PROTEIN L249.800.8929
8 Mapoly0003s0043 [PTHR10657] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00581] Rhodanese-like domain; [GO:0016853] isomerase activity; [PTHR10657:SF4] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 (ROTAMASE PIN1)(PPIASE PIN1); [PF00639] PPIC-type PPIASE domain11.220.8632
9 Mapoly0035s0067 [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PTHR11082:SF4] TRNA-DIHYDROURIDINE SYNTHASE 2; [PF01207] Dihydrouridine synthase (Dus); [KOG2335] tRNA-dihydrouridine synthase; [GO:0008033] tRNA processing; [PTHR11082] TRNA-DIHYDROURIDINE SYNTHASE; [GO:0017150] tRNA dihydrouridine synthase activity; [K05543] tRNA-dihydrouridine synthase 2 [EC:1.-.-.-]; [1.-.-.-] Oxidoreductases.13.190.8532
10 Mapoly0059s0023 [PTHR23365] POLY-A BINDING PROTEIN 2; [KOG4208] Nucleolar RNA-binding protein NIFK; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)14.000.8826
11 Mapoly0007s0049 [PF08615] Ribonuclease H2 non-catalytic subunit (Ylr154p-like); [PTHR21726] PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED; [K10745] ribonuclease H2 subunit C17.150.8368
12 Mapoly0078s0013 [PTHR11721:SF3] SUBFAMILY NOT NAMED; [PF00828] Ribosomal protein L18e/L15; [PTHR11721] 60S RIBOSOMAL PROTEIN L27A; [K02900] large subunit ribosomal protein L27Ae; [KOG1742] 60s ribosomal protein L15/L2718.870.8907
13 Mapoly0042s0033 [PTHR15315] RING FINGER PROTEIN 41, 151; [PF13424] Tetratricopeptide repeat21.560.7842
14 Mapoly0102s0027 [PF02657] Fe-S metabolism associated domain; [PTHR12735] BOLA-LIKE PROTEIN-RELATED; [KOG2313] Stress-induced protein UVI31+; [PF01722] BolA-like protein21.630.8740
15 Mapoly0046s0095 [PF00504] Chlorophyll A-B binding protein; [GO:0006783] heme biosynthetic process; [PF00762] Ferrochelatase; [PTHR11108] FERROCHELATASE; [GO:0004325] ferrochelatase activity; [KOG1321] Protoheme ferro-lyase (ferrochelatase)23.070.7950
16 Mapoly0072s0006 [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG3166] 60S ribosomal protein L7A; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [PTHR23105:SF1] 60S RIBOSOMAL PROTEIN L7A; [K02936] large subunit ribosomal protein L7Ae23.750.8846
17 Mapoly0019s0152 [GO:0009058] biosynthetic process; [PF03088] Strictosidine synthase; [GO:0016844] strictosidine synthase activity; [KOG1520] Predicted alkaloid synthase/Surface mucin Hemomucin; [PTHR10426] STRICTOSIDINE SYNTHASE-RELATED25.380.8381
18 Mapoly0001s0169 [PF09353] Domain of unknown function (DUF1995)26.150.8455
19 Mapoly0218s0011 [GO:0003677] DNA binding; [GO:0000786] nucleosome; [GO:0005634] nucleus; [KOG1744] Histone H2B; [PF00125] Core histone H2A/H2B/H3/H4; [K11252] histone H2B; [PTHR23428] HISTONE H2B26.660.8223
20 Mapoly0012s0048 [PF05648] Peroxisomal biogenesis factor 11 (PEX11); [PTHR12652] PEROXISOMAL BIOGENESIS FACTOR 11; [KOG4186] Peroxisomal biogenesis protein (peroxin); [GO:0005779] integral to peroxisomal membrane; [GO:0016559] peroxisome fission27.570.8618
21 Mapoly0019s0150 [PF01812] 5-formyltetrahydrofolate cyclo-ligase family; [KOG3093] 5-formyltetrahydrofolate cyclo-ligase; [PTHR23407] ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE; [PTHR23407:SF1] 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE28.140.8489
22 Mapoly0036s0018 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [K02960] small subunit ribosomal protein S16e; [GO:0006412] translation28.980.8817
23 Mapoly0083s0054 [PTHR12879] SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2; [1.14.-.-] Acting on paired donors, with incorporation or reduction of molecular oxygen.; [K04712] sphingolipid delta-4 desaturase [EC:1.14.-.-]; [PF00487] Fatty acid desaturase; [KOG2987] Fatty acid desaturase; [PF08557] Sphingolipid Delta4-desaturase (DES); [GO:0006629] lipid metabolic process30.330.8165
24 Mapoly0003s0161 [GO:0005840] ribosome; [PTHR11843] 40S RIBOSOMAL PROTEIN S12; [GO:0003735] structural constituent of ribosome; [KOG3406] 40S ribosomal protein S12; [GO:0005622] intracellular; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [GO:0006412] translation; [K02951] small subunit ribosomal protein S12e31.030.8810
25 Mapoly0039s0072 -31.110.8182
26 Mapoly0001s0530 [GO:0003677] DNA binding; [PF02151] UvrB/uvrC motif; [PF08755] Hemimethylated DNA-binding protein YccV like; [GO:0005515] protein binding; [PTHR31350] FAMILY NOT NAMED31.180.7488
27 Mapoly0046s0044 [PF10247] Reactive mitochondrial oxygen species modulator 1; [KOG4096] Uncharacterized conserved protein33.230.8575
28 Mapoly0055s0071 [GO:0005840] ribosome; [PF01294] Ribosomal protein L13e; [GO:0003735] structural constituent of ribosome; [PTHR11722] 60S RIBOSOMAL PROTEIN L13; [GO:0005622] intracellular; [PTHR11722:SF0] SUBFAMILY NOT NAMED; [K02873] large subunit ribosomal protein L13e; [KOG3295] 60S Ribosomal protein L13; [GO:0006412] translation37.630.8746
29 Mapoly0027s0126 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [K02981] small subunit ribosomal protein S2e; [PF03719] Ribosomal protein S5, C-terminal domain37.760.8511
30 Mapoly0095s0001 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation38.340.8675
31 Mapoly0071s0098 [GO:0005840] ribosome; [PTHR12010] 40S RIBOSOMAL PROTEIN S29; [KOG3506] 40S ribosomal protein S29; [K02980] small subunit ribosomal protein S29e; [PF00253] Ribosomal protein S14p/S29e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation39.120.8666
32 Mapoly0028s0133 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE39.240.7847
33 Mapoly0103s0030 -41.180.8491
34 Mapoly0035s0075 -41.710.7893
35 Mapoly0011s0195 [GO:0005840] ribosome; [KOG3419] Mitochondrial/chloroplast ribosomal protein S16; [PF00886] Ribosomal protein S16; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12919] 30S RIBOSOMAL PROTEIN S16; [GO:0006412] translation42.710.8624
36 Mapoly0016s0091 [GO:0005840] ribosome; [K02949] small subunit ribosomal protein S11e; [KOG1728] 40S ribosomal protein S11; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER43.240.8658
37 Mapoly0083s0020 [GO:0005840] ribosome; [KOG1754] 40S ribosomal protein S15/S22; [PTHR11758] 30S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [K02957] small subunit ribosomal protein S15Ae; [PF00410] Ribosomal protein S8; [GO:0006412] translation44.180.8660
38 Mapoly0008s0090 [GO:0003723] RNA binding; [KOG3273] Predicted RNA-binding protein Pno1p interacting with Nob1p and involved in 26S proteasome assembly; [K11884] RNA-binding protein PNO1; [PF00013] KH domain; [PTHR12826] FAMILY NOT NAMED44.430.8160
39 Mapoly0075s0073 [PF02713] Domain of unknown function DUF220; [PTHR31385] FAMILY NOT NAMED45.380.8275
40 Mapoly0127s0045 [PTHR15852] FAMILY NOT NAMED45.720.8325
41 Mapoly0143s0026 [PF12681] Glyoxalase-like domain; [PTHR31071] FAMILY NOT NAMED45.960.8373
42 Mapoly0039s0086 [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0006633] fatty acid biosynthetic process; [PF12076] WAX2 C-terminal domain; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [PTHR11863] STEROL DESATURASE46.040.7597
43 Mapoly0153s0035 [PF01381] Helix-turn-helix; [GO:0043565] sequence-specific DNA binding; [K03627] putative transcription factor; [KOG3398] Transcription factor MBF1; [PTHR10245] ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1); [PF08523] Multiprotein bridging factor 147.400.8604
44 Mapoly0047s0085 [GO:0005840] ribosome; [PF00238] Ribosomal protein L14p/L23e; [GO:0003735] structural constituent of ribosome; [KOG0901] 60S ribosomal protein L14/L17/L23; [PTHR11761] 50S/60S RIBOSOMAL PROTEIN L14/L23; [GO:0006412] translation48.060.8601
45 Mapoly0027s0053 [PF14368] Probable lipid transfer48.770.7690
46 Mapoly0510s0001 -49.570.8166
47 Mapoly0124s0041 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation; [K02964] small subunit ribosomal protein S18e50.530.8583
48 Mapoly0032s0082 [PF00009] Elongation factor Tu GTP binding domain; [GO:0003924] GTPase activity; [PTHR23115:SF69] PREDICTED: SIMILAR TO EFTUD2 PROTEIN, PARTIAL; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 253.120.7805
49 Mapoly0026s0092 [PTHR24193] ANKYRIN REPEAT PROTEIN; [KOG4214] Myotrophin and similar proteins; [PF12796] Ankyrin repeats (3 copies)54.220.8152
50 Mapoly0158s0015 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [K02969] small subunit ribosomal protein S20e; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e54.250.8554
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