Guide Gene
- Gene ID
- Mapoly1100s0002
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0042254] ribosome biogenesis; [KOG1723] 60s ribosomal protein L30 isolog; [K02896] large subunit ribosomal protein L24e; [PF01246] Ribosomal protein L24e; [PTHR10792] 60S RIBOSOMAL PROTEIN L24
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly1100s0002 [GO:0042254] ribosome biogenesis; [KOG1723] 60s ribosomal protein L30 isolog; [K02896] large subunit ribosomal protein L24e; [PF01246] Ribosomal protein L24e; [PTHR10792] 60S RIBOSOMAL PROTEIN L24 0.00 1.0000 1 Mapoly0059s0023 [PTHR23365] POLY-A BINDING PROTEIN 2; [KOG4208] Nucleolar RNA-binding protein NIFK; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.41 0.9460 2 Mapoly0124s0041 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation; [K02964] small subunit ribosomal protein S18e 4.80 0.9464 3 Mapoly0127s0012 [PTHR13557:SF1] gb def: hypothetical protein xp_167260 [homo sapiens]; [PTHR13557] UNCHARACTERIZED 6.32 0.9329 4 Mapoly0143s0026 [PF12681] Glyoxalase-like domain; [PTHR31071] FAMILY NOT NAMED 6.78 0.8935 5 Mapoly0035s0067 [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PTHR11082:SF4] TRNA-DIHYDROURIDINE SYNTHASE 2; [PF01207] Dihydrouridine synthase (Dus); [KOG2335] tRNA-dihydrouridine synthase; [GO:0008033] tRNA processing; [PTHR11082] TRNA-DIHYDROURIDINE SYNTHASE; [GO:0017150] tRNA dihydrouridine synthase activity; [K05543] tRNA-dihydrouridine synthase 2 [EC:1.-.-.-]; [1.-.-.-] Oxidoreductases. 7.55 0.8865 6 Mapoly0008s0090 [GO:0003723] RNA binding; [KOG3273] Predicted RNA-binding protein Pno1p interacting with Nob1p and involved in 26S proteasome assembly; [K11884] RNA-binding protein PNO1; [PF00013] KH domain; [PTHR12826] FAMILY NOT NAMED 7.87 0.8851 7 Mapoly0153s0037 [PTHR21213] FAMILY NOT NAMED; [PTHR21213:SF0] SUBFAMILY NOT NAMED 9.27 0.8694 8 Mapoly0020s0123 [PTHR12642] FAMILY NOT NAMED; [PTHR12642:SF0] SUBFAMILY NOT NAMED; [KOG3163] Uncharacterized conserved protein related to ribosomal protein S8E; [PF01201] Ribosomal protein S8e 9.49 0.9322 9 Mapoly0027s0126 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [K02981] small subunit ribosomal protein S2e; [PF03719] Ribosomal protein S5, C-terminal domain 9.64 0.9036 10 Mapoly0001s0306 [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9.80 0.8929 11 Mapoly0012s0116 [GO:0005840] ribosome; [K02955] small subunit ribosomal protein S14e; [GO:0003735] structural constituent of ribosome; [KOG0407] 40S ribosomal protein S14; [PTHR11759] 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11; [GO:0006412] translation; [PF00411] Ribosomal protein S11 10.54 0.8995 12 Mapoly0036s0018 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [K02960] small subunit ribosomal protein S16e; [GO:0006412] translation 11.09 0.9460 13 Mapoly0071s0098 [GO:0005840] ribosome; [PTHR12010] 40S RIBOSOMAL PROTEIN S29; [KOG3506] 40S ribosomal protein S29; [K02980] small subunit ribosomal protein S29e; [PF00253] Ribosomal protein S14p/S29e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation 11.49 0.9388 14 Mapoly0035s0075 - 12.08 0.8082 15 Mapoly0016s0091 [GO:0005840] ribosome; [K02949] small subunit ribosomal protein S11e; [KOG1728] 40S ribosomal protein S11; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 13.78 0.9402 16 Mapoly0083s0020 [GO:0005840] ribosome; [KOG1754] 40S ribosomal protein S15/S22; [PTHR11758] 30S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [K02957] small subunit ribosomal protein S15Ae; [PF00410] Ribosomal protein S8; [GO:0006412] translation 14.56 0.9416 17 Mapoly0078s0013 [PTHR11721:SF3] SUBFAMILY NOT NAMED; [PF00828] Ribosomal protein L18e/L15; [PTHR11721] 60S RIBOSOMAL PROTEIN L27A; [K02900] large subunit ribosomal protein L27Ae; [KOG1742] 60s ribosomal protein L15/L27 17.55 0.9340 18 Mapoly0007s0049 [PF08615] Ribonuclease H2 non-catalytic subunit (Ylr154p-like); [PTHR21726] PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED; [K10745] ribonuclease H2 subunit C 18.97 0.8629 19 Mapoly0039s0072 - 20.59 0.8460 20 Mapoly0026s0092 [PTHR24193] ANKYRIN REPEAT PROTEIN; [KOG4214] Myotrophin and similar proteins; [PF12796] Ankyrin repeats (3 copies) 21.68 0.8597 21 Mapoly0055s0060 [GO:0003743] translation initiation factor activity; [PF01253] Translation initiation factor SUI1; [GO:0006413] translational initiation 22.98 0.8835 22 Mapoly0095s0001 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation 24.08 0.9309 23 Mapoly0047s0085 [GO:0005840] ribosome; [PF00238] Ribosomal protein L14p/L23e; [GO:0003735] structural constituent of ribosome; [KOG0901] 60S ribosomal protein L14/L17/L23; [PTHR11761] 50S/60S RIBOSOMAL PROTEIN L14/L23; [GO:0006412] translation 26.74 0.9278 24 Mapoly0095s0009 [GO:0005840] ribosome; [PF01667] Ribosomal protein S27; [GO:0003735] structural constituent of ribosome; [PTHR11594] 40S RIBOSOMAL PROTEIN S27; [GO:0005622] intracellular; [KOG1779] 40s ribosomal protein S27; [K02978] small subunit ribosomal protein S27e; [GO:0006412] translation 26.87 0.8994 25 Mapoly0004s0156 [GO:0005840] ribosome; [PF01200] Ribosomal protein S28e; [GO:0003735] structural constituent of ribosome; [K02979] small subunit ribosomal protein S28e; [GO:0005622] intracellular; [KOG3502] 40S ribosomal protein S28; [PTHR10769] 40S RIBOSOMAL PROTEIN S28; [GO:0006412] translation 27.50 0.9275 26 Mapoly0006s0241 [PF00687] Ribosomal protein L1p/L10e family; [K02865] large subunit ribosomal protein L10Ae; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1570] 60S ribosomal protein L10A 28.00 0.9232 27 Mapoly0036s0060 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein 29.39 0.9003 28 Mapoly0185s0018 [PF12171] Zinc-finger double-stranded RNA-binding; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED; [KOG3408] U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing; [PTHR20863:SF2] ZINC FINGER PROTEIN 593-RELATED 29.82 0.8297 29 Mapoly0003s0161 [GO:0005840] ribosome; [PTHR11843] 40S RIBOSOMAL PROTEIN S12; [GO:0003735] structural constituent of ribosome; [KOG3406] 40S ribosomal protein S12; [GO:0005622] intracellular; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [GO:0006412] translation; [K02951] small subunit ribosomal protein S12e 30.81 0.9267 30 Mapoly0045s0142 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 31.22 0.8840 31 Mapoly0064s0119 [GO:0005840] ribosome; [GO:0005515] protein binding; [K02927] large subunit ribosomal protein L40e; [GO:0003735] structural constituent of ribosome; [KOG0003] Ubiquitin/60s ribosomal protein L40 fusion; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [GO:0006412] translation; [PF01020] Ribosomal L40e family 31.46 0.9245 32 Mapoly0047s0023 [PF12937] F-box-like; [GO:0005515] protein binding 31.78 0.7774 33 Mapoly0007s0048 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain 32.40 0.9248 34 Mapoly0006s0174 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein 35.20 0.9179 35 Mapoly0008s0132 [GO:0005840] ribosome; [K02955] small subunit ribosomal protein S14e; [GO:0003735] structural constituent of ribosome; [KOG0407] 40S ribosomal protein S14; [PTHR11759] 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11; [GO:0006412] translation; [PF00411] Ribosomal protein S11 35.47 0.9216 36 Mapoly0122s0053 [GO:0007067] mitosis; [GO:0005681] spliceosomal complex; [PTHR12052] THIOREDOXIN-LIKE PROTEN 4A, 4B; [KOG3414] Component of the U4/U6.U5 snRNP/mitosis protein DIM1; [PF02966] Mitosis protein DIM1; [K12859] U5 snRNP protein, DIM1 family 35.75 0.8806 37 Mapoly0149s0032 - 35.78 0.7536 38 Mapoly0068s0027 [GO:0005840] ribosome; [PF00181] Ribosomal Proteins L2, RNA binding domain; [PTHR13691:SF16] 50S RIBOSOMAL PROTEIN L2; [PF03947] Ribosomal Proteins L2, C-terminal domain; [PTHR13691] RIBOSOMAL PROTEIN L2; [GO:0003735] structural constituent of ribosome; [K02938] large subunit ribosomal protein L8e; [KOG2309] 60s ribosomal protein L2/L8; [GO:0005622] intracellular; [GO:0006412] translation 37.34 0.8956 39 Mapoly0084s0049 [GO:0005515] protein binding; [K03249] translation initiation factor eIF-3 subunit 5; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [PTHR10540:SF6] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F; [KOG2975] Translation initiation factor 3, subunit f (eIF-3f); [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 37.74 0.8632 40 Mapoly0001s0114 [PF03629] Domain of unknown function (DUF303); [PTHR31988] FAMILY NOT NAMED 38.57 0.8621 41 Mapoly0046s0044 [PF10247] Reactive mitochondrial oxygen species modulator 1; [KOG4096] Uncharacterized conserved protein 38.73 0.8777 42 Mapoly0033s0120 [PF00887] Acyl CoA binding protein; [GO:0000062] fatty-acyl-CoA binding; [PTHR23310] ACYL-COA-BINDING PROTEIN, ACBP 39.00 0.8362 43 Mapoly0002s0182 [GO:0005840] ribosome; [PTHR19970] RIBOSOMAL PROTEIN L39E; [PF00832] Ribosomal L39 protein; [K02924] large subunit ribosomal protein L39e; [GO:0003735] structural constituent of ribosome; [KOG0002] 60s ribosomal protein L39; [GO:0005622] intracellular; [GO:0006412] translation 39.12 0.9213 44 Mapoly0044s0040 - 39.33 0.8628 45 Mapoly0063s0011 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [K02983] small subunit ribosomal protein S30e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion 39.71 0.9191 46 Mapoly0003s0256 [GO:0005840] ribosome; [K02912] large subunit ribosomal protein L32e; [KOG0878] 60S ribosomal protein L32; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N; [PF01655] Ribosomal protein L32 41.71 0.9185 47 Mapoly0153s0035 [PF01381] Helix-turn-helix; [GO:0043565] sequence-specific DNA binding; [K03627] putative transcription factor; [KOG3398] Transcription factor MBF1; [PTHR10245] ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1); [PF08523] Multiprotein bridging factor 1 42.25 0.9005 48 Mapoly0043s0113 [KOG4771] Nucleolar protein (NOP16) involved in 60S ribosomal subunit biogenesis; [PTHR13243] HSPC111 PROTEIN-RELATED; [PF09420] Ribosome biogenesis protein Nop16 42.50 0.8246 49 Mapoly0002s0184 [GO:0005840] ribosome; [PTHR10544:SF0] 60S RIBOSOMAL PROTEIN L28; [KOG3412] 60S ribosomal protein L28; [PTHR10544] 60S RIBOSOMAL PROTEIN L28; [GO:0003735] structural constituent of ribosome; [K02903] large subunit ribosomal protein L28e; [GO:0005622] intracellular; [PF01778] Ribosomal L28e protein family; [GO:0006412] translation 42.90 0.9171 50 Mapoly0052s0065 [GO:0005840] ribosome; [K02889] large subunit ribosomal protein L21e; [PTHR20981] 60S RIBOSOMAL PROTEIN L21; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG1732] 60S ribosomal protein L21; [GO:0006412] translation; [PF01157] Ribosomal protein L21e 43.75 0.9175