Guide Gene

Gene ID
Mapoly0218s0011
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003677] DNA binding; [GO:0000786] nucleosome; [GO:0005634] nucleus; [KOG1744] Histone H2B; [PF00125] Core histone H2A/H2B/H3/H4; [K11252] histone H2B; [PTHR23428] HISTONE H2B

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0218s0011 [GO:0003677] DNA binding; [GO:0000786] nucleosome; [GO:0005634] nucleus; [KOG1744] Histone H2B; [PF00125] Core histone H2A/H2B/H3/H4; [K11252] histone H2B; [PTHR23428] HISTONE H2B 0.00 1.0000
1 Mapoly0052s0091 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily1.730.8589
2 Mapoly0055s0060 [GO:0003743] translation initiation factor activity; [PF01253] Translation initiation factor SUI1; [GO:0006413] translational initiation9.270.8478
3 Mapoly0033s0043 [GO:0055114] oxidation-reduction process; [1.1.1.284] S-(hydroxymethyl)glutathione dehydrogenase.; [KOG0022] Alcohol dehydrogenase, class III; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [1.1.1.1] Alcohol dehydrogenase.; [PTHR11695:SF269] PUTATIVE OXIDOREDUCTASE; [K00121] S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED14.390.8028
4 Mapoly0063s0098 [PF04770] ZF-HD protein dimerisation region; [PTHR31948] FAMILY NOT NAMED16.280.7823
5 Mapoly0072s0006 [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG3166] 60S ribosomal protein L7A; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [PTHR23105:SF1] 60S RIBOSOMAL PROTEIN L7A; [K02936] large subunit ribosomal protein L7Ae19.670.8398
6 Mapoly0011s0195 [GO:0005840] ribosome; [KOG3419] Mitochondrial/chloroplast ribosomal protein S16; [PF00886] Ribosomal protein S16; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12919] 30S RIBOSOMAL PROTEIN S16; [GO:0006412] translation23.660.8371
7 Mapoly0068s0027 [GO:0005840] ribosome; [PF00181] Ribosomal Proteins L2, RNA binding domain; [PTHR13691:SF16] 50S RIBOSOMAL PROTEIN L2; [PF03947] Ribosomal Proteins L2, C-terminal domain; [PTHR13691] RIBOSOMAL PROTEIN L2; [GO:0003735] structural constituent of ribosome; [K02938] large subunit ribosomal protein L8e; [KOG2309] 60s ribosomal protein L2/L8; [GO:0005622] intracellular; [GO:0006412] translation24.980.8320
8 Mapoly0158s0015 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [K02969] small subunit ribosomal protein S20e; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e25.980.8341
9 Mapoly0001s0306 [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain26.660.8223
10 Mapoly0003s0301 [PTHR21091:SF6] HOMOCYSTEINE S-METHYLTRANSFERASE; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [PF02574] Homocysteine S-methyltransferase; [K00547] homocysteine S-methyltransferase [EC:2.1.1.10]; [KOG1579] Homocysteine S-methyltransferase; [GO:0008898] homocysteine S-methyltransferase activity; [2.1.1.10] Homocysteine S-methyltransferase.30.720.8116
11 Mapoly0133s0010 [PF00692] dUTPase; [GO:0046080] dUTP metabolic process; [3.6.1.23] dUTP diphosphatase.; [GO:0016787] hydrolase activity; [PTHR11241] DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE; [K01520] dUTP pyrophosphatase [EC:3.6.1.23]; [KOG3370] dUTPase30.980.8072
12 Mapoly0001s0562 [PF14368] Probable lipid transfer31.140.7586
13 Mapoly0075s0047 [GO:0006807] nitrogen compound metabolic process; [GO:0016151] nickel cation binding; [PF01730] UreF32.310.6660
14 Mapoly0027s0053 [PF14368] Probable lipid transfer33.470.7681
15 Mapoly0027s0119 [GO:0005840] ribosome; [K02961] small subunit ribosomal protein S17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG1740] Predicted mitochondrial/chloroplast ribosomal protein S17; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER34.090.8259
16 Mapoly0037s0030 [GO:0005840] ribosome; [PF03868] Ribosomal protein L6, N-terminal domain; [PTHR10715] 60S RIBOSOMAL PROTEIN L6; [K02934] large subunit ribosomal protein L6e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01159] Ribosomal protein L6e; [GO:0006412] translation; [KOG1694] 60s ribosomal protein L635.500.8222
17 Mapoly0001s0114 [PF03629] Domain of unknown function (DUF303); [PTHR31988] FAMILY NOT NAMED37.150.8140
18 Mapoly0036s0073 [PF00571] CBS domain; [PTHR11911] INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED; [GO:0030554] adenyl nucleotide binding37.790.7734
19 Mapoly0078s0013 [PTHR11721:SF3] SUBFAMILY NOT NAMED; [PF00828] Ribosomal protein L18e/L15; [PTHR11721] 60S RIBOSOMAL PROTEIN L27A; [K02900] large subunit ribosomal protein L27Ae; [KOG1742] 60s ribosomal protein L15/L2739.100.8216
20 Mapoly0004s0249 [GO:0000287] magnesium ion binding; [GO:0016791] phosphatase activity; [GO:0009117] nucleotide metabolic process; [PF06437] IMP-specific 5'-nucleotidase39.370.7830
21 Mapoly0136s0036 [PTHR11746] O-METHYLTRANSFERASE; [GO:0046983] protein dimerization activity; [GO:0008171] O-methyltransferase activity; [KOG3178] Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases; [PF08100] Dimerisation domain; [PF00891] O-methyltransferase42.250.7667
22 Mapoly0009s0107 [GO:0005840] ribosome; [PTHR11700] 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [KOG0900] 40S ribosomal protein S20; [K02946] small subunit ribosomal protein S10; [GO:0006412] translation; [PF00338] Ribosomal protein S10p/S20e42.330.8243
23 Mapoly0159s0014 -42.970.8181
24 Mapoly0108s0009 [PTHR11803] TRANSLATION INITIATION INHIBITOR; [PF01042] Endoribonuclease L-PSP; [KOG2317] Putative translation initiation inhibitor UK114/IBM143.870.7989
25 Mapoly0071s0013 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [K02981] small subunit ribosomal protein S2e; [PF03719] Ribosomal protein S5, C-terminal domain44.900.8095
26 Mapoly0002s0184 [GO:0005840] ribosome; [PTHR10544:SF0] 60S RIBOSOMAL PROTEIN L28; [KOG3412] 60S ribosomal protein L28; [PTHR10544] 60S RIBOSOMAL PROTEIN L28; [GO:0003735] structural constituent of ribosome; [K02903] large subunit ribosomal protein L28e; [GO:0005622] intracellular; [PF01778] Ribosomal L28e protein family; [GO:0006412] translation45.170.8184
27 Mapoly0016s0131 [GO:0003723] RNA binding; [KOG3301] Ribosomal protein S4; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K02997] small subunit ribosomal protein S9e; [PF01479] S4 domain47.030.8167
28 Mapoly0100s0057 [GO:0009607] response to biotic stimulus; [PTHR31213] FAMILY NOT NAMED; [PF00407] Pathogenesis-related protein Bet v I family; [GO:0006952] defense response51.380.7057
29 Mapoly0121s0031 [K00517] beta-carotene 15,15'-monooxygenase [EC:1.14.99.36]; [GO:0005506] iron ion binding; [1.14.-.-] Acting on paired donors, with incorporation or reduction of molecular oxygen.; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45053.810.5804
30 Mapoly0043s0105 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0042254] ribosome biogenesis; [GO:0003735] structural constituent of ribosome; [PTHR21141:SF3] 60S ACIDIC RIBOSOMAL PROTEIN P0; [KOG0815] 60S acidic ribosomal protein P0; [GO:0005622] intracellular; [K02941] large subunit ribosomal protein LP0; [PF00466] Ribosomal protein L10; [PF00428] 60s Acidic ribosomal protein53.890.8025
31 Mapoly0006s0309 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [PTHR10293] GLUTAREDOXIN-RELATED PROTEIN54.220.8070
32 Mapoly0207s0012 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG0397] 60S ribosomal protein L11; [PF00281] Ribosomal protein L5; [GO:0006412] translation; [PTHR11994] 60S RIBOSOMAL PROTEIN L11-RELATED; [PF00673] ribosomal L5P family C-terminus55.500.8055
33 Mapoly0007s0079 [KOG1308] Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein; [PTHR22904] TPR REPEAT CONTAINING PROTEIN55.820.7893
34 Mapoly0015s0154 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L1356.160.8093
35 Mapoly0015s0104 -56.260.7110
36 Mapoly0006s0174 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein58.600.8116
37 Mapoly0028s0133 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE58.740.7472
38 Mapoly0022s0171 [2.5.1.48] Cystathionine gamma-synthase.; [PTHR11808:SF14] CYSTATHIONINE GAMMA-SYNTHASE; [PTHR11808] TRANS-SULFURATION ENZYME FAMILY MEMBER; [K01739] cystathionine gamma-synthase [EC:2.5.1.48]; [GO:0030170] pyridoxal phosphate binding; [PF01053] Cys/Met metabolism PLP-dependent enzyme; [KOG0053] Cystathionine beta-lyases/cystathionine gamma-synthases61.260.7970
39 Mapoly0059s0037 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [PTHR10352] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G; [PF12353] Eukaryotic translation initiation factor 3 subunit G; [K03248] translation initiation factor eIF-3 subunit 4; [GO:0003676] nucleic acid binding; [KOG0122] Translation initiation factor 3, subunit g (eIF-3g); [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)61.320.7900
40 Mapoly0071s0101 [KOG1379] Serine/threonine protein phosphatase; [PF13672] Protein phosphatase 2C; [PTHR12320] PROTEIN PHOSPHATASE 2C65.670.7147
41 Mapoly0020s0099 [GO:0005840] ribosome; [K02949] small subunit ribosomal protein S11e; [KOG1728] 40S ribosomal protein S11; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER68.590.7944
42 Mapoly0084s0023 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45069.710.7630
43 Mapoly0003s0086 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H469.970.7827
44 Mapoly0005s0116 [GO:0005840] ribosome; [PF01294] Ribosomal protein L13e; [GO:0003735] structural constituent of ribosome; [PTHR11722] 60S RIBOSOMAL PROTEIN L13; [GO:0005622] intracellular; [PTHR11722:SF0] SUBFAMILY NOT NAMED; [K02873] large subunit ribosomal protein L13e; [KOG3295] 60S Ribosomal protein L13; [GO:0006412] translation71.240.7958
45 Mapoly0099s0059 [GO:0005840] ribosome; [PF00181] Ribosomal Proteins L2, RNA binding domain; [PTHR13691:SF16] 50S RIBOSOMAL PROTEIN L2; [PF03947] Ribosomal Proteins L2, C-terminal domain; [PTHR13691] RIBOSOMAL PROTEIN L2; [GO:0003735] structural constituent of ribosome; [KOG2309] 60s ribosomal protein L2/L8; [GO:0005622] intracellular; [GO:0006412] translation71.580.7966
46 Mapoly0026s0044 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [K13789] geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.1] Dimethylallyltranstransferase.; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.10] (2E,6E)-farnesyl diphosphate synthase.; [PTHR12001:SF23] SUBFAMILY NOT NAMED; [2.5.1.29] Geranylgeranyl diphosphate synthase.72.750.7761
47 Mapoly0020s0109 [K01759] lactoylglutathione lyase [EC:4.4.1.5]; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [4.4.1.5] Lactoylglutathione lyase.; [KOG2943] Predicted glyoxalase; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily73.340.7283
48 Mapoly0046s0001 [KOG2551] Phospholipase/carboxyhydrolase; [PF03959] Serine hydrolase (FSH1); [PTHR22778] OVARIAN CANCER GENE-2 PROTEIN-RELATED73.940.7683
49 Mapoly0126s0014 [PF00132] Bacterial transferase hexapeptide (six repeats); [2.3.1.-] Transferring groups other than amino-acyl groups.; [PTHR23416:SF23] NODULATION PROTEIN L; [GO:0016407] acetyltransferase activity; [KOG4750] Serine O-acetyltransferase; [PTHR23416] SIALIC ACID SYNTHASE-RELATED; [K00680] phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158]; [PF12464] Maltose acetyltransferase74.240.7530
50 Mapoly0054s0044 [GO:0005840] ribosome; [K02872] large subunit ribosomal protein L13Ae; [PTHR11545:SF3] 60S RIBOSOMAL PROTEIN L13A; [KOG3204] 60S ribosomal protein L13a; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L1374.590.7981
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