Guide Gene

Gene ID
Mapoly0162s0018
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation; [PTHR11229:SF0] SUBFAMILY NOT NAMED

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0201 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [K02943] large subunit ribosomal protein LP2; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein
Mapoly0001s0404 [1.8.1.7] Glutathione-disulfide reductase.; [GO:0050660] flavin adenine dinucleotide binding; [KOG0405] Pyridine nucleotide-disulphide oxidoreductase; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [K00383] glutathione reductase (NADPH) [EC:1.8.1.7]; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [PF07992] Pyridine nucleotide-disulphide oxidoreductase
Mapoly0003s0273 [PF02769] AIR synthase related protein, C-terminal domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [6.3.3.1] Phosphoribosylformylglycinamidine cyclo-ligase.; [K01933] phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]; [PF00586] AIR synthase related protein, N-terminal domain; [GO:0003824] catalytic activity; [PTHR10520:SF22] PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE
Mapoly0005s0074 [GO:0000287] magnesium ion binding; [PTHR11902] ENOLASE; [PF03952] Enolase, N-terminal domain; [GO:0004634] phosphopyruvate hydratase activity; [GO:0006096] glycolysis; [PF00113] Enolase, C-terminal TIM barrel domain; [4.2.1.11] Phosphopyruvate hydratase.; [GO:0000015] phosphopyruvate hydratase complex; [K01689] enolase [EC:4.2.1.11]; [KOG2670] Enolase
Mapoly0005s0181 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [6.1.1.17] Glutamate--tRNA ligase.; [KOG1149] Glutamyl-tRNA synthetase (mitochondrial); [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]
Mapoly0007s0122 [2.6.1.9] Histidinol-phosphate transaminase.; [GO:0009058] biosynthetic process; [KOG0633] Histidinol phosphate aminotransferase; [GO:0030170] pyridoxal phosphate binding; [K00817] histidinol-phosphate aminotransferase [EC:2.6.1.9]; [PF00155] Aminotransferase class I and II; [PTHR11751:SF3] HISTIDINOL-PHOSPHATE AMINOTRANSFERASE; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED
Mapoly0012s0037 [PTHR11751:SF22] AMINOTRANSFERASE RELATED; [GO:0009058] biosynthetic process; [K10206] LL-diaminopimelate aminotransferase [EC:2.6.1.83]; [GO:0030170] pyridoxal phosphate binding; [2.6.1.83] LL-diaminopimelate aminotransferase.; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0010285] L,L-diaminopimelate aminotransferase activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED
Mapoly0012s0185 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase
Mapoly0013s0023 [GO:0000287] magnesium ion binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF03483] B3/4 domain; [GO:0005737] cytoplasm; [K01890] phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]; [GO:0004826] phenylalanine-tRNA ligase activity; [PF03484] tRNA synthetase B5 domain; [6.1.1.20] Phenylalanine--tRNA ligase.; [GO:0043039] tRNA aminoacylation; [GO:0006432] phenylalanyl-tRNA aminoacylation; [GO:0000049] tRNA binding; [KOG2472] Phenylalanyl-tRNA synthetase beta subunit; [GO:0004812] aminoacyl-tRNA ligase activity; [PTHR10947] PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47; [PF01409] tRNA synthetases class II core domain (F)
Mapoly0016s0043 [2.7.2.4] Aspartate kinase.; [PF00742] Homoserine dehydrogenase; [GO:0016597] amino acid binding; [PTHR21499] ASPARTATE KINASE; [PF01842] ACT domain; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PF00696] Amino acid kinase family; [GO:0008152] metabolic process; [GO:0006520] cellular amino acid metabolic process; [K12524] bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]; [KOG0455] Homoserine dehydrogenase; [GO:0050661] NADP binding; [PF03447] Homoserine dehydrogenase, NAD binding domain; [1.1.1.3] Homoserine dehydrogenase.
Mapoly0023s0178 [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0000166] nucleotide binding; [K01866] tyrosyl-tRNA synthetase [EC:6.1.1.1]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [6.1.1.1] Tyrosine--tRNA ligase.; [KOG2144] Tyrosyl-tRNA synthetase, cytoplasmic; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity
Mapoly0029s0145 [GO:0003677] DNA binding; [PF00046] Homeobox domain
Mapoly0030s0078 [GO:0016597] amino acid binding; [PF01842] ACT domain; [GO:0006099] tricarboxylic acid cycle; [PTHR30523] PHOSPHOENOLPYRUVATE CARBOXYLASE; [PF00311] Phosphoenolpyruvate carboxylase; [GO:0008152] metabolic process; [GO:0008964] phosphoenolpyruvate carboxylase activity; [GO:0015977] carbon fixation
Mapoly0030s0106 [GO:0031072] heat shock protein binding; [KOG0715] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding
Mapoly0033s0134 [PTHR20836] DIHYDRODIPICOLINATE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [PF01113] Dihydrodipicolinate reductase, N-terminus; [K00215] dihydrodipicolinate reductase [EC:1.3.1.26]; [PF05173] Dihydrodipicolinate reductase, C-terminus; [1.3.1.26] Transferred entry: 1.17.1.8.; [PTHR20836:SF0] SUBFAMILY NOT NAMED; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0008839] 4-hydroxy-tetrahydrodipicolinate reductase
Mapoly0038s0028 [6.3.4.5] Argininosuccinate synthase.; [GO:0005524] ATP binding; [PF00764] Arginosuccinate synthase; [GO:0004055] argininosuccinate synthase activity; [GO:0006526] arginine biosynthetic process; [PTHR11587] ARGININOSUCCINATE SYNTHASE; [KOG1706] Argininosuccinate synthase; [K01940] argininosuccinate synthase [EC:6.3.4.5]
Mapoly0045s0044 [GO:0005524] ATP binding; [KOG2355] Predicted ABC-type transport, ATPase component/CCR4 associated factor; [PTHR24220] FAMILY NOT NAMED; [GO:0016887] ATPase activity; [GO:0006810] transport; [PF08402] TOBE domain; [GO:0016820] hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; [GO:0043190] ATP-binding cassette (ABC) transporter complex; [GO:0005215] transporter activity; [PF00005] ABC transporter
Mapoly0107s0036 [PTHR11659] GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT B (MITOCHONDRIAL AND PROKARYOTIC) PET112-RELATED; [PF02637] GatB domain; [GO:0016874] ligase activity; [PTHR11659:SF1] GLUTAMYL-TRNA AMIDOTRANSFERASE SUBUNIT B; [GO:0016884] carbon-nitrogen ligase activity, with glutamine as amido-N-donor; [6.3.5.7] Glutaminyl-tRNA synthase (glutamine-hydrolyzing).; [PF02934] GatB/GatE catalytic domain; [6.3.5.6] Asparaginyl-tRNA synthase (glutamine-hydrolyzing).; [KOG2438] Glutamyl-tRNA amidotransferase subunit B; [K02434] aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Mapoly0120s0006 [GO:0009231] riboflavin biosynthetic process; [PTHR21058] 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE (DMRL SYNTHASE) (LUMAZINE SYNTHASE); [PF00885] 6,7-dimethyl-8-ribityllumazine synthase; [GO:0009349] riboflavin synthase complex; [KOG3243] 6,7-dimethyl-8-ribityllumazine synthase; [K00794] 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]; [2.5.1.78] 6,7-dimethyl-8-ribityllumazine synthase.; [PTHR21058:SF0] SUBFAMILY NOT NAMED
Mapoly0162s0018 [GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation; [PTHR11229:SF0] SUBFAMILY NOT NAMED
Mapoly0163s0012 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [PTHR11766:SF0] SUBFAMILY NOT NAMED; [GO:0000166] nucleotide binding; [KOG2623] Tyrosyl-tRNA synthetase; [K01866] tyrosyl-tRNA synthetase [EC:6.1.1.1]; [PTHR11766] TYROSYL-TRNA SYNTHETASE; [6.1.1.1] Tyrosine--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [PF01479] S4 domain; [GO:0004831] tyrosine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity