Guide Gene

Gene ID
Mapoly0136s0004
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K01904] 4-coumarate--CoA ligase [EC:6.2.1.12]; [PF00501] AMP-binding enzyme; [6.2.1.12] 4-coumarate--CoA ligase.; [KOG1176] Acyl-CoA synthetase; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0136s0004 [K01904] 4-coumarate--CoA ligase [EC:6.2.1.12]; [PF00501] AMP-binding enzyme; [6.2.1.12] 4-coumarate--CoA ligase.; [KOG1176] Acyl-CoA synthetase; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED 0.00 1.0000
1 Mapoly0020s0136 [K01070] S-formylglutathione hydrolase [EC:3.1.2.12]; [PF00756] Putative esterase; [GO:0018738] S-formylglutathione hydrolase activity; [KOG3101] Esterase D; [PTHR10061] S-FORMYLGLUTATHIONE HYDROLASE; [GO:0046294] formaldehyde catabolic process; [3.1.2.12] S-formylglutathione hydrolase.2.450.7439
2 Mapoly0044s0075 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE4.240.7300
3 Mapoly0002s0224 [KOG0143] Iron/ascorbate family oxidoreductases; [1.14.11.9] Flavanone 3-dioxygenase.; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [K00475] naringenin 3-dioxygenase [EC:1.14.11.9]; [PF03171] 2OG-Fe(II) oxygenase superfamily6.480.7190
4 Mapoly0175s0004 [PF02431] Chalcone-flavanone isomerase; [GO:0016872] intramolecular lyase activity7.070.7109
5 Mapoly0072s0097 [PF07883] Cupin domain10.950.6963
6 Mapoly0014s0104 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process12.000.7130
7 Mapoly0015s0047 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [PTHR24360] MAPKK/MEKK; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0581] Mitogen-activated protein kinase kinase (MAP2K)17.460.6273
8 Mapoly0063s0049 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE22.200.6580
9 Mapoly0164s0010 [GO:0009058] biosynthetic process; [PF03088] Strictosidine synthase; [GO:0016844] strictosidine synthase activity; [KOG1520] Predicted alkaloid synthase/Surface mucin Hemomucin; [PTHR10426] STRICTOSIDINE SYNTHASE-RELATED26.460.6617
10 Mapoly0014s0184 -27.110.6972
11 Mapoly0153s0009 [PTHR19359] CYTOCHROME B5; [GO:0020037] heme binding; [KOG0537] Cytochrome b5; [PF00173] Cytochrome b5-like Heme/Steroid binding domain28.840.6813
12 Mapoly0100s0048 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K00703] starch synthase [EC:2.4.1.21]; [PF08323] Starch synthase catalytic domain; [PTHR12526] GLYCOSYLTRANSFERASE; [2.4.1.21] Starch synthase.30.460.6772
13 Mapoly0014s0128 [PF01190] Pollen proteins Ole e I like31.300.6209
14 Mapoly0061s0068 [PF00091] Tubulin/FtsZ family, GTPase domain; [GO:0005874] microtubule; [PTHR11588] TUBULIN; [GO:0007017] microtubule-based process; [PF03953] Tubulin C-terminal domain; [GO:0006184] GTP catabolic process; [K07374] tubulin alpha; [GO:0003924] GTPase activity; [GO:0051258] protein polymerization; [GO:0043234] protein complex; [KOG1376] Alpha tubulin; [GO:0005525] GTP binding31.750.6376
15 Mapoly0082s0075 [GO:0000287] magnesium ion binding; [GO:0005737] cytoplasm; [GO:0008253] 5'-nucleotidase activity; [KOG3128] Uncharacterized conserved protein; [PTHR13045] NT5C3 HYDROLASE; [PF05822] Pyrimidine 5'-nucleotidase (UMPH-1)32.560.4943
16 Mapoly0028s0038 [PF04832] SOUL heme-binding protein; [PTHR11220] HEME-BINDING PROTEIN-RELATED37.110.6771
17 Mapoly0140s0020 [PF14368] Probable lipid transfer41.130.6928
18 Mapoly0072s0091 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process41.710.6816
19 Mapoly0091s0054 [GO:0005783] endoplasmic reticulum; [K13250] translocon-associated protein subunit beta; [PTHR12861] TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR (TRAP-BETA) (SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT); [GO:0016021] integral to membrane; [PF05753] Translocon-associated protein beta (TRAPB); [KOG3317] Translocon-associated complex TRAP, beta subunit41.790.6975
20 Mapoly0120s0024 [PF14368] Probable lipid transfer42.050.5916
21 Mapoly0036s0058 [GO:0008652] cellular amino acid biosynthetic process; [KOG4354] N-acetyl-gamma-glutamyl-phosphate reductase; [PF01118] Semialdehyde dehydrogenase, NAD binding domain; [GO:0005737] cytoplasm; [GO:0055114] oxidation-reduction process; [GO:0046983] protein dimerization activity; [PF02774] Semialdehyde dehydrogenase, dimerisation domain; [1.2.1.-] With NAD(+) or NADP(+) as acceptor.; [GO:0016620] oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; [PTHR32338] FAMILY NOT NAMED; [K00145] N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase [EC:1.2.1.38 1.2.1.-]; [GO:0051287] NAD binding; [GO:0003942] N-acetyl-gamma-glutamyl-phosphate reductase activity; [1.2.1.38] N-acetyl-gamma-glutamyl-phosphate reductase.42.250.6707
22 Mapoly0099s0001 [GO:0016758] transferase activity, transferring hexosyl groups; [K13496] UDP-glucosyl transferase 73C [EC:2.4.1.-]; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [2.4.1.-] Hexosyltransferases.; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase43.780.6203
23 Mapoly0141s0017 [2.5.1.18] Glutathione transferase.; [GO:0005515] protein binding; [K00799] glutathione S-transferase [EC:2.5.1.18]; [PF00043] Glutathione S-transferase, C-terminal domain; [PF02798] Glutathione S-transferase, N-terminal domain; [KOG0867] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING44.900.6400
24 Mapoly0043s0053 [K01061] carboxymethylenebutenolidase [EC:3.1.1.45]; [KOG3043] Predicted hydrolase related to dienelactone hydrolase; [GO:0016787] hydrolase activity; [PTHR17630] DIENELACTONE HYDROLASE; [3.1.1.45] Carboxymethylenebutenolidase.; [PF01738] Dienelactone hydrolase family45.890.6754
25 Mapoly0001s0094 [KOG2551] Phospholipase/carboxyhydrolase; [PF03959] Serine hydrolase (FSH1); [PTHR22778] OVARIAN CANCER GENE-2 PROTEIN-RELATED; [PTHR22778:SF0] SUBFAMILY NOT NAMED52.310.6200
26 Mapoly0036s0103 [KOG2854] Possible pfkB family carbohydrate kinase; [GO:0006166] purine ribonucleoside salvage; [K00856] adenosine kinase [EC:2.7.1.20]; [PTHR10584:SF24] ADENOSINE KINASE; [PF00294] pfkB family carbohydrate kinase; [2.7.1.20] Adenosine kinase.; [GO:0004001] adenosine kinase activity; [PTHR10584] SUGAR KINASE52.440.6869
27 Mapoly0047s0001 [GO:0016758] transferase activity, transferring hexosyl groups; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase53.330.5621
28 Mapoly0039s0076 [PF04756] OST3 / OST6 family; [KOG3356] Predicted membrane protein; [PTHR13160] FAMILY NOT NAMED56.770.6849
29 Mapoly0008s0172 [GO:0016161] beta-amylase activity; [GO:0000272] polysaccharide catabolic process; [PTHR31352] FAMILY NOT NAMED; [PF01373] Glycosyl hydrolase family 1462.260.6176
30 Mapoly0085s0082 [GO:0004733] pyridoxamine-phosphate oxidase activity; [GO:0008615] pyridoxine biosynthetic process; [PTHR10851] PYRIDOXINE-5-PHOSPHATE OXIDASE; [GO:0055114] oxidation-reduction process; [KOG4558] Uncharacterized conserved protein; [PTHR10851:SF0] PYRIDOXINE-5-PHOSPHATE OXIDASE; [PF12766] Pyridoxamine 5'-phosphate oxidase; [GO:0010181] FMN binding64.930.5973
31 Mapoly0061s0127 [GO:0006808] regulation of nitrogen utilization; [PF00543] Nitrogen regulatory protein P-II; [GO:0030234] enzyme regulator activity; [PTHR30115] NITROGEN REGULATORY PROTEIN P-II66.250.6518
32 Mapoly0103s0018 [PF02353] Mycolic acid cyclopropane synthetase; [PTHR10108] METHYLTRANSFERASE; [GO:0008610] lipid biosynthetic process; [PTHR10108:SF275] SUBFAMILY NOT NAMED66.880.6271
33 Mapoly0090s0032 [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [KOG0907] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE69.500.6798
34 Mapoly0115s0031 [PTHR12655:SF0] SUBFAMILY NOT NAMED; [PTHR12655] ACYL-COA THIOESTERASE; [KOG2763] Acyl-CoA thioesterase; [PF03061] Thioesterase superfamily72.550.6592
35 Mapoly0001s0345 [KOG1196] Predicted NAD-dependent oxidoreductase; [GO:0055114] oxidation-reduction process; [PTHR11695:SF5] ZINC-CONTAINING ALCOHOL DEHYDROGENASE; [K08070] 2-alkenal reductase [EC:1.3.1.74]; [GO:0008270] zinc ion binding; [GO:0016491] oxidoreductase activity; [1.3.1.74] 2-alkenal reductase.; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED73.690.6786
36 Mapoly0674s0001 [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF06813] Nodulin-like74.160.6004
37 Mapoly0028s0053 [GO:0005524] ATP binding; [K00859] dephospho-CoA kinase [EC:2.7.1.24]; [KOG3220] Similar to bacterial dephospho-CoA kinase; [PTHR10695] DEPHOSPHO-COA KINASE-RELATED; [GO:0015937] coenzyme A biosynthetic process; [2.7.1.24] Dephospho-CoA kinase.; [PF01121] Dephospho-CoA kinase; [GO:0004140] dephospho-CoA kinase activity74.480.6435
38 Mapoly0075s0021 [1.14.19.-] With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water.; [PTHR32100:SF0] SUBFAMILY NOT NAMED; [K10256] omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]; [PTHR32100] FAMILY NOT NAMED; [PF00487] Fatty acid desaturase; [GO:0006629] lipid metabolic process75.170.6026
39 Mapoly0013s0174 [KOG1684] Enoyl-CoA hydratase; [3.1.2.4] 3-hydroxyisobutyryl-CoA hydrolase.; [PF00378] Enoyl-CoA hydratase/isomerase family; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [K05605] 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]; [PTHR11941] ENOYL-COA HYDRATASE-RELATED; [PF13766] 2-enoyl-CoA Hydratase C-terminal region78.500.6607
40 Mapoly0001s0454 [PTHR24012] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)79.810.6491
41 Mapoly0117s0032 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)80.480.6358
42 Mapoly0091s0074 [PTHR12924:SF0] SUBFAMILY NOT NAMED; [KOG1631] Translocon-associated complex TRAP, alpha subunit; [PF03896] Translocon-associated protein (TRAP), alpha subunit; [GO:0005789] endoplasmic reticulum membrane; [PTHR12924] TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT83.280.6747
43 Mapoly0005s0235 [PF00132] Bacterial transferase hexapeptide (six repeats); [PTHR13061:SF0] SUBFAMILY NOT NAMED; [PTHR13061] DYNACTIN SUBUNIT P2585.230.6525
44 Mapoly0015s0091 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0016679] oxidoreductase activity, acting on diphenols and related substances as donors; [GO:0008121] ubiquinol-cytochrome-c reductase activity; [GO:0055114] oxidation-reduction process; [PF02921] Ubiquinol cytochrome reductase transmembrane region; [KOG1671] Ubiquinol cytochrome c reductase, subunit RIP1; [GO:0016491] oxidoreductase activity; [PTHR10134] CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL; [PF00355] Rieske [2Fe-2S] domain; [1.10.2.2] Ubiquinol--cytochrome-c reductase.; [K00411] ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]; [PTHR10134:SF1] UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT85.530.6530
45 Mapoly0055s0110 [PF13233] Complex1_LYR-like; [1.6.99.3] NADH dehydrogenase.; [PTHR12964] NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [KOG3426] NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit; [K03950] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 6 [EC:1.6.5.3 1.6.99.3]87.120.6683
46 Mapoly0117s0031 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)91.750.5983
47 Mapoly0111s0054 [6.2.1.5] Succinate--CoA ligase (ADP-forming).; [6.2.1.4] Succinate--CoA ligase (GDP-forming).; [GO:0048037] cofactor binding; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [KOG1255] Succinyl-CoA synthetase, alpha subunit; [PF00549] CoA-ligase; [PF02629] CoA binding domain; [K01899] succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5]; [PTHR11117] SUCCINYL-COA SYNTHETASE-RELATED92.650.6449
48 Mapoly0004s0107 [GO:0045454] cell redox homeostasis; [5.3.4.1] Protein disulfide-isomerase.; [PF13848] Thioredoxin-like domain; [KOG0190] Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit); [PF00085] Thioredoxin; [K09580] protein disulfide-isomerase A1 [EC:5.3.4.1]; [PTHR18929] PROTEIN DISULFIDE ISOMERASE93.650.6374
49 Mapoly0003s0042 [GO:0016597] amino acid binding; [PF02729] Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; [2.1.3.3] Ornithine carbamoyltransferase.; [GO:0016743] carboxyl- or carbamoyltransferase activity; [K00611] ornithine carbamoyltransferase [EC:2.1.3.3]; [GO:0006520] cellular amino acid metabolic process; [PTHR11405] CARBAMOYLTRANSFERASE RELATED; [KOG1504] Ornithine carbamoyltransferase OTC/ARG3; [PF00185] Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain95.810.5918
50 Mapoly0142s0030 [GO:0016020] membrane; [GO:0005524] ATP binding; [KOG0061] Transporter, ABC superfamily (Breast cancer resistance protein); [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF00005] ABC transporter97.130.5792
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