Guide Gene

Gene ID
Mapoly0014s0104
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0014s0104 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process 0.00 1.0000
1 Mapoly0117s0032 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)1.000.9031
2 Mapoly0134s0005 [PTHR11540:SF9] MALATE DEHYDROGENASE, CYTOPLASMIC; [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [KOG1494] NAD-dependent malate dehydrogenase; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11540] MALATE AND LACTATE DEHYDROGENASE; [GO:0044262] cellular carbohydrate metabolic process; [1.1.1.37] Malate dehydrogenase.; [K00026] malate dehydrogenase [EC:1.1.1.37]1.410.8288
3 Mapoly0117s0031 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)2.450.7975
4 Mapoly0100s0027 [GO:0009116] nucleoside metabolic process; [PTHR11776] ADENINE PHOSPHORIBOSYLTRANSFERASE; [2.4.2.7] Adenine phosphoribosyltransferase.; [KOG1712] Adenine phosphoribosyl transferases; [K00759] adenine phosphoribosyltransferase [EC:2.4.2.7]; [PF00156] Phosphoribosyl transferase domain3.870.7800
5 Mapoly0100s0048 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K00703] starch synthase [EC:2.4.1.21]; [PF08323] Starch synthase catalytic domain; [PTHR12526] GLYCOSYLTRANSFERASE; [2.4.1.21] Starch synthase.5.660.7612
6 Mapoly0136s0004 [K01904] 4-coumarate--CoA ligase [EC:6.2.1.12]; [PF00501] AMP-binding enzyme; [6.2.1.12] 4-coumarate--CoA ligase.; [KOG1176] Acyl-CoA synthetase; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED12.000.7130
7 Mapoly0011s0058 [GO:0016651] oxidoreductase activity, acting on NAD(P)H; [GO:0055114] oxidation-reduction process; [PTHR11993:SF10] NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT; [1.6.99.3] NADH dehydrogenase.; [GO:0051287] NAD binding; [PTHR11993] NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [K03935] NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:1.6.5.3 1.6.99.3]; [PF00346] Respiratory-chain NADH dehydrogenase, 49 Kd subunit; [GO:0048038] quinone binding; [KOG2870] NADH:ubiquinone oxidoreductase, NDUFS2/49 kDa subunit12.690.7746
8 Mapoly0124s0059 -13.490.7445
9 Mapoly0008s0062 [PTHR10849] NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 8, MITOCHONDRIAL; [1.6.99.3] NADH dehydrogenase.; [PF12838] 4Fe-4S dicluster domain; [KOG3256] NADH:ubiquinone oxidoreductase, NDUFS8/23 kDa subunit; [K03941] NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:1.6.5.3 1.6.99.3]; [GO:0051536] iron-sulfur cluster binding; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).13.860.7871
10 Mapoly0045s0064 [4.2.1.2] Fumarate hydratase.; [PF00206] Lyase; [PF10415] Fumarase C C-terminus; [GO:0006099] tricarboxylic acid cycle; [GO:0016829] lyase activity; [PTHR11444] ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE; [K01679] fumarate hydratase, class II [EC:4.2.1.2]; [KOG1317] Fumarase; [PTHR11444:SF1] ASPARTATE AMMONIA LYASE14.390.7575
11 Mapoly0005s0235 [PF00132] Bacterial transferase hexapeptide (six repeats); [PTHR13061:SF0] SUBFAMILY NOT NAMED; [PTHR13061] DYNACTIN SUBUNIT P2514.900.7777
12 Mapoly0142s0030 [GO:0016020] membrane; [GO:0005524] ATP binding; [KOG0061] Transporter, ABC superfamily (Breast cancer resistance protein); [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF00005] ABC transporter15.390.6657
13 Mapoly0019s0094 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0753] Mitochondrial fatty acid anion carrier protein/Uncoupling protein18.170.7484
14 Mapoly0001s0454 [PTHR24012] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)21.630.7481
15 Mapoly0177s0014 [GO:0016762] xyloglucan:xyloglucosyl transferase activity; [GO:0048046] apoplast; [GO:0006073] cellular glucan metabolic process; [PTHR31062] FAMILY NOT NAMED; [PF06955] Xyloglucan endo-transglycosylase (XET) C-terminus; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00722] Glycosyl hydrolases family 16; [2.4.1.207] Xyloglucan:xyloglucosyl transferase.; [K08235] xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]; [GO:0005618] cell wall24.580.6222
16 Mapoly0175s0004 [PF02431] Chalcone-flavanone isomerase; [GO:0016872] intramolecular lyase activity25.220.6949
17 Mapoly0003s0068 [KOG1662] Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [K02137] F-type H+-transporting ATPase oligomycin sensitivity conferral protein [EC:3.6.3.14]; [PTHR11910] ATP SYNTHASE DELTA CHAIN; [GO:0015986] ATP synthesis coupled proton transport; [PF00213] ATP synthase delta (OSCP) subunit27.390.7426
18 Mapoly0014s0184 -29.390.7408
19 Mapoly0030s0029 [GO:0016597] amino acid binding; [PF01842] ACT domain; [KOG0068] D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily; [K00058] D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]; [GO:0055114] oxidation-reduction process; [1.1.1.95] Phosphoglycerate dehydrogenase.; [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain30.170.6724
20 Mapoly0014s0022 [PTHR10984] ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN; [PF13850] Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); [KOG2667] COPII vesicle protein; [PF07970] Endoplasmic reticulum vesicle transporter; [PTHR10984:SF25] SUBFAMILY NOT NAMED30.200.6863
21 Mapoly0067s0021 [PF02823] ATP synthase, Delta/Epsilon chain, beta-sandwich domain; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [GO:0045261] proton-transporting ATP synthase complex, catalytic core F(1); [KOG1758] Mitochondrial F1F0-ATP synthase, subunit delta/ATP16; [K02134] F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]; [GO:0015986] ATP synthesis coupled proton transport; [PTHR13822] ATP SYNTHASE DELTA/EPSILON CHAIN30.200.7104
22 Mapoly0141s0017 [2.5.1.18] Glutathione transferase.; [GO:0005515] protein binding; [K00799] glutathione S-transferase [EC:2.5.1.18]; [PF00043] Glutathione S-transferase, C-terminal domain; [PF02798] Glutathione S-transferase, N-terminal domain; [KOG0867] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING30.300.6932
23 Mapoly0005s0017 [PTHR10772] 10 KDA HEAT SHOCK PROTEIN; [KOG1641] Mitochondrial chaperonin; [GO:0005737] cytoplasm; [PF00166] Chaperonin 10 Kd subunit; [GO:0006457] protein folding; [K04078] chaperonin GroES31.180.7483
24 Mapoly0002s0215 [GO:0000287] magnesium ion binding; [K00030] isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]; [GO:0055114] oxidation-reduction process; [PF00180] Isocitrate/isopropylmalate dehydrogenase; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11835] DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE; [GO:0051287] NAD binding; [1.1.1.41] Isocitrate dehydrogenase (NAD(+)).; [KOG0785] Isocitrate dehydrogenase, alpha subunit32.080.7327
25 Mapoly0041s0099 [PTHR22976] BIOTIN SYNTHASE; [K01012] biotin synthetase [EC:2.8.1.6]; [PF06968] Biotin and Thiamin Synthesis associated domain; [PF04055] Radical SAM superfamily; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [2.8.1.6] Biotin synthase.; [KOG2900] Biotin synthase32.500.7197
26 Mapoly0036s0058 [GO:0008652] cellular amino acid biosynthetic process; [KOG4354] N-acetyl-gamma-glutamyl-phosphate reductase; [PF01118] Semialdehyde dehydrogenase, NAD binding domain; [GO:0005737] cytoplasm; [GO:0055114] oxidation-reduction process; [GO:0046983] protein dimerization activity; [PF02774] Semialdehyde dehydrogenase, dimerisation domain; [1.2.1.-] With NAD(+) or NADP(+) as acceptor.; [GO:0016620] oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; [PTHR32338] FAMILY NOT NAMED; [K00145] N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase [EC:1.2.1.38 1.2.1.-]; [GO:0051287] NAD binding; [GO:0003942] N-acetyl-gamma-glutamyl-phosphate reductase activity; [1.2.1.38] N-acetyl-gamma-glutamyl-phosphate reductase.36.950.7099
27 Mapoly0005s0169 [GO:0016021] integral to membrane; [GO:0006810] transport; [KOG1691] emp24/gp25L/p24 family of membrane trafficking proteins; [PF01105] emp24/gp25L/p24 family/GOLD; [PTHR22811] TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN39.120.7395
28 Mapoly0091s0054 [GO:0005783] endoplasmic reticulum; [K13250] translocon-associated protein subunit beta; [PTHR12861] TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR (TRAP-BETA) (SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT); [GO:0016021] integral to membrane; [PF05753] Translocon-associated protein beta (TRAPB); [KOG3317] Translocon-associated complex TRAP, beta subunit39.620.7509
29 Mapoly0111s0054 [6.2.1.5] Succinate--CoA ligase (ADP-forming).; [6.2.1.4] Succinate--CoA ligase (GDP-forming).; [GO:0048037] cofactor binding; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [KOG1255] Succinyl-CoA synthetase, alpha subunit; [PF00549] CoA-ligase; [PF02629] CoA binding domain; [K01899] succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5]; [PTHR11117] SUCCINYL-COA SYNTHETASE-RELATED40.000.7340
30 Mapoly0039s0027 [GO:0055114] oxidation-reduction process; [GO:0016717] oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; [PTHR32100] FAMILY NOT NAMED; [PF00487] Fatty acid desaturase; [GO:0006629] lipid metabolic process; [PF11960] Domain of unknown function (DUF3474)46.730.6884
31 Mapoly0049s0087 [PF12263] Protein of unknown function (DUF3611)48.400.7189
32 Mapoly0080s0090 [PF00581] Rhodanese-like domain48.760.6631
33 Mapoly0015s0091 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0016679] oxidoreductase activity, acting on diphenols and related substances as donors; [GO:0008121] ubiquinol-cytochrome-c reductase activity; [GO:0055114] oxidation-reduction process; [PF02921] Ubiquinol cytochrome reductase transmembrane region; [KOG1671] Ubiquinol cytochrome c reductase, subunit RIP1; [GO:0016491] oxidoreductase activity; [PTHR10134] CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL; [PF00355] Rieske [2Fe-2S] domain; [1.10.2.2] Ubiquinol--cytochrome-c reductase.; [K00411] ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]; [PTHR10134:SF1] UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT48.910.7241
34 Mapoly0062s0010 [PTHR11693] ATP SYNTHASE GAMMA CHAIN; [PTHR11693:SF22] ATP SYNTHASE GAMMA SUBUNIT; [PF00231] ATP synthase; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [GO:0045261] proton-transporting ATP synthase complex, catalytic core F(1); [GO:0015986] ATP synthesis coupled proton transport; [K02136] F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]; [KOG1531] F0F1-type ATP synthase, gamma subunit50.380.7225
35 Mapoly0048s0016 [KOG0625] Phosphoglucomutase; [K01835] phosphoglucomutase [EC:5.4.2.2]; [PTHR22573] PHOSPHOHEXOMUTASE FAMILY MEMBER; [GO:0016868] intramolecular transferase activity, phosphotransferases; [GO:0005975] carbohydrate metabolic process; [PTHR22573:SF2] PHOSPHOGLUCOMUTASE; [5.4.2.2] Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent).; [PF02879] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; [PF02878] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; [PF02880] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; [PF00408] Phosphoglucomutase/phosphomannomutase, C-terminal domain52.760.7001
36 Mapoly0077s0025 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE53.240.7022
37 Mapoly0036s0116 [PF00132] Bacterial transferase hexapeptide (six repeats); [PTHR13061] DYNACTIN SUBUNIT P2553.770.6987
38 Mapoly0188s0011 [K00434] L-ascorbate peroxidase [EC:1.11.1.11]; [GO:0055114] oxidation-reduction process; [PF00141] Peroxidase; [GO:0020037] heme binding; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity; [PTHR31356] FAMILY NOT NAMED; [1.11.1.11] L-ascorbate peroxidase.54.330.6368
39 Mapoly0080s0009 [K01725] cyanate lyase [EC:4.2.1.104]; [PF02560] Cyanate lyase C-terminal domain; [GO:0009439] cyanate metabolic process; [4.2.1.104] Cyanase.55.500.7322
40 Mapoly0004s0107 [GO:0045454] cell redox homeostasis; [5.3.4.1] Protein disulfide-isomerase.; [PF13848] Thioredoxin-like domain; [KOG0190] Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit); [PF00085] Thioredoxin; [K09580] protein disulfide-isomerase A1 [EC:5.3.4.1]; [PTHR18929] PROTEIN DISULFIDE ISOMERASE57.920.6929
41 Mapoly0034s0104 [K00800] 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]; [2.5.1.19] 3-phosphoshikimate 1-carboxyvinyltransferase.; [KOG0692] Pentafunctional AROM protein; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR21090] AROM/DEHYDROQUINATE SYNTHASE; [PF00275] EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)58.300.6482
42 Mapoly0021s0019 -58.740.6295
43 Mapoly0164s0010 [GO:0009058] biosynthetic process; [PF03088] Strictosidine synthase; [GO:0016844] strictosidine synthase activity; [KOG1520] Predicted alkaloid synthase/Surface mucin Hemomucin; [PTHR10426] STRICTOSIDINE SYNTHASE-RELATED59.710.6426
44 Mapoly0029s0048 [GO:0000287] magnesium ion binding; [K00030] isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]; [GO:0055114] oxidation-reduction process; [PF00180] Isocitrate/isopropylmalate dehydrogenase; [KOG0784] Isocitrate dehydrogenase, gamma subunit; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11835] DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE; [GO:0051287] NAD binding; [1.1.1.41] Isocitrate dehydrogenase (NAD(+)).60.970.6835
45 Mapoly0044s0081 -61.430.7158
46 Mapoly0091s0074 [PTHR12924:SF0] SUBFAMILY NOT NAMED; [KOG1631] Translocon-associated complex TRAP, alpha subunit; [PF03896] Translocon-associated protein (TRAP), alpha subunit; [GO:0005789] endoplasmic reticulum membrane; [PTHR12924] TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT61.800.7371
47 Mapoly0008s0172 [GO:0016161] beta-amylase activity; [GO:0000272] polysaccharide catabolic process; [PTHR31352] FAMILY NOT NAMED; [PF01373] Glycosyl hydrolase family 1461.970.6389
48 Mapoly0078s0023 [3.6.3.14] H(+)-transporting two-sector ATPase.; [K02140] F-type H+-transporting ATPase subunit g [EC:3.6.3.14]; [GO:0000276] mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); [GO:0015078] hydrogen ion transmembrane transporter activity; [PF04718] Mitochondrial ATP synthase g subunit; [GO:0015986] ATP synthesis coupled proton transport; [PTHR12386] FAMILY NOT NAMED62.210.7382
49 Mapoly0001s0115 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF12796] Ankyrin repeats (3 copies)63.240.6338
50 Mapoly0001s0327 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [2.3.1.12] Dihydrolipoyllysine-residue acetyltransferase.; [PF00364] Biotin-requiring enzyme; [KOG0557] Dihydrolipoamide acetyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [K00627] pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain65.670.6502
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