Guide Gene

Gene ID
Mapoly0091s0054
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005783] endoplasmic reticulum; [K13250] translocon-associated protein subunit beta; [PTHR12861] TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR (TRAP-BETA) (SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT); [GO:0016021] integral to membrane; [PF05753] Translocon-associated protein beta (TRAPB); [KOG3317] Translocon-associated complex TRAP, beta subunit

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0091s0054 [GO:0005783] endoplasmic reticulum; [K13250] translocon-associated protein subunit beta; [PTHR12861] TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR (TRAP-BETA) (SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT); [GO:0016021] integral to membrane; [PF05753] Translocon-associated protein beta (TRAPB); [KOG3317] Translocon-associated complex TRAP, beta subunit 0.00 1.0000
1 Mapoly0014s0184 -1.410.8847
2 Mapoly0091s0074 [PTHR12924:SF0] SUBFAMILY NOT NAMED; [KOG1631] Translocon-associated complex TRAP, alpha subunit; [PF03896] Translocon-associated protein (TRAP), alpha subunit; [GO:0005789] endoplasmic reticulum membrane; [PTHR12924] TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT1.730.8891
3 Mapoly0090s0032 [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [KOG0907] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE4.900.8677
4 Mapoly0039s0076 [PF04756] OST3 / OST6 family; [KOG3356] Predicted membrane protein; [PTHR13160] FAMILY NOT NAMED6.480.8708
5 Mapoly0179s0026 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process7.750.8788
6 Mapoly0001s0454 [PTHR24012] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)11.660.8282
7 Mapoly0020s0072 [KOG4763] Ubiquinol-cytochrome c reductase hinge protein; [GO:0008121] ubiquinol-cytochrome-c reductase activity; [K00416] ubiquinol-cytochrome c reductase subunit 6 [EC:1.10.2.2]; [GO:0006122] mitochondrial electron transport, ubiquinol to cytochrome c; [PTHR15336] UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN; [PF02320] Ubiquinol-cytochrome C reductase hinge protein; [1.10.2.2] Ubiquinol--cytochrome-c reductase.11.870.8830
8 Mapoly0080s0042 [K14004] protein transport protein SEC13; [KOG1332] Vesicle coat complex COPII, subunit SEC13; [PTHR11024] PROTEIN TRANSPORT PROTEIN SEC13-RELATED; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat14.070.7829
9 Mapoly0022s0108 [KOG1748] Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit; [PF00550] Phosphopantetheine attachment site; [1.6.99.3] NADH dehydrogenase.; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED; [K03955] NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1 [EC:1.6.5.3 1.6.99.3]; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).14.900.8708
10 Mapoly0041s0112 -15.170.8776
11 Mapoly0153s0010 [PTHR19359] CYTOCHROME B5; [GO:0020037] heme binding; [KOG0537] Cytochrome b5; [PF00173] Cytochrome b5-like Heme/Steroid binding domain16.430.8656
12 Mapoly0159s0021 [PTHR13509] SEC61BETA-PROV PROTEIN; [KOG3457] Sec61 protein translocation complex, beta subunit; [PF03911] Sec61beta family; [K09481] protein transport protein SEC61 subunit beta18.330.8205
13 Mapoly0002s0197 [K03965] NADH dehydrogenase (ubiquinone) 1 beta subcomplex 9 [EC:1.6.5.3 1.6.99.3]; [1.6.99.3] NADH dehydrogenase.; [PF05347] Complex 1 protein (LYR family); [PTHR12868] NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT; [PTHR12868:SF0] SUBFAMILY NOT NAMED; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).18.380.8596
14 Mapoly0005s0169 [GO:0016021] integral to membrane; [GO:0006810] transport; [KOG1691] emp24/gp25L/p24 family of membrane trafficking proteins; [PF01105] emp24/gp25L/p24 family/GOLD; [PTHR22811] TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN20.710.8236
15 Mapoly0036s0032 [PF10890] Protein of unknown function (DUF2741); [GO:0022900] electron transport chain; [GO:0005743] mitochondrial inner membrane; [GO:0070469] respiratory chain21.210.8662
16 Mapoly0001s0090 [K11353] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 13 [EC:1.6.5.3 1.6.99.3]; [PF06212] GRIM-19 protein; [KOG3300] NADH:ubiquinone oxidoreductase, B16.6 subunit/cell death-regulatory protein; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [PTHR12966] NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 13; [PTHR12966:SF0] NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 13; [1.6.99.3] NADH dehydrogenase.21.910.8620
17 Mapoly0078s0023 [3.6.3.14] H(+)-transporting two-sector ATPase.; [K02140] F-type H+-transporting ATPase subunit g [EC:3.6.3.14]; [GO:0000276] mitochondrial proton-transporting ATP synthase complex, coupling factor F(o); [GO:0015078] hydrogen ion transmembrane transporter activity; [PF04718] Mitochondrial ATP synthase g subunit; [GO:0015986] ATP synthesis coupled proton transport; [PTHR12386] FAMILY NOT NAMED21.910.8584
18 Mapoly0014s0111 [PTHR32001] FAMILY NOT NAMED; [KOG4615] Uncharacterized conserved protein; [PF09775] Keratinocyte-associated protein 223.920.8343
19 Mapoly0072s0091 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process24.980.7791
20 Mapoly0066s0039 -25.080.8579
21 Mapoly0014s0022 [PTHR10984] ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN; [PF13850] Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); [KOG2667] COPII vesicle protein; [PF07970] Endoplasmic reticulum vesicle transporter; [PTHR10984:SF25] SUBFAMILY NOT NAMED25.750.7218
22 Mapoly0014s0113 -26.980.8593
23 Mapoly0055s0110 [PF13233] Complex1_LYR-like; [1.6.99.3] NADH dehydrogenase.; [PTHR12964] NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [KOG3426] NADH:ubiquinone oxidoreductase, NDUFA6/B14 subunit; [K03950] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 6 [EC:1.6.5.3 1.6.99.3]27.220.8495
24 Mapoly0111s0054 [6.2.1.5] Succinate--CoA ligase (ADP-forming).; [6.2.1.4] Succinate--CoA ligase (GDP-forming).; [GO:0048037] cofactor binding; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [KOG1255] Succinyl-CoA synthetase, alpha subunit; [PF00549] CoA-ligase; [PF02629] CoA binding domain; [K01899] succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5]; [PTHR11117] SUCCINYL-COA SYNTHETASE-RELATED27.420.8151
25 Mapoly0079s0047 [GO:0016651] oxidoreductase activity, acting on NAD(P)H; [PF04800] ETC complex I subunit conserved region; [1.6.99.3] NADH dehydrogenase.; [PTHR12219] NADH-UBIQUINONE OXIDOREDUCTASE; [K03937] NADH dehydrogenase (ubiquinone) Fe-S protein 4 [EC:1.6.5.3 1.6.99.3]; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [GO:0022900] electron transport chain28.200.8590
26 Mapoly0116s0030 -28.980.8480
27 Mapoly0043s0053 [K01061] carboxymethylenebutenolidase [EC:3.1.1.45]; [KOG3043] Predicted hydrolase related to dienelactone hydrolase; [GO:0016787] hydrolase activity; [PTHR17630] DIENELACTONE HYDROLASE; [3.1.1.45] Carboxymethylenebutenolidase.; [PF01738] Dienelactone hydrolase family31.750.7755
28 Mapoly0097s0059 [KOG4604] Uncharacterized conserved protein; [PTHR21304:SF0] SUBFAMILY NOT NAMED; [PTHR21304] UNCHARACTERIZED; [PF04418] Domain of unknown function (DUF543)32.310.8555
29 Mapoly0046s0003 [GO:0004579] dolichyl-diphosphooligosaccharide-protein glycotransferase activity; [PF02109] DAD family; [GO:0008250] oligosaccharyltransferase complex; [GO:0016021] integral to membrane; [KOG1746] Defender against cell death protein/oligosaccharyltransferase, epsilon subunit; [PTHR10705] DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1; [K12668] oligosaccharyltransferase complex subunit epsilon32.860.8381
30 Mapoly0007s0078 [GO:0016020] membrane; [PTHR12309] SEC61 GAMMA SUBUNIT; [PF00584] SecE/Sec61-gamma subunits of protein translocation complex; [GO:0006605] protein targeting; [KOG3498] Preprotein translocase, gamma subunit; [GO:0006886] intracellular protein transport; [K07342] protein transport protein SEC61 subunit gamma and related proteins33.500.8469
31 Mapoly0074s0034 [PTHR12980:SF0] SUBFAMILY NOT NAMED; [PTHR12980] UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX, SUBUNIT X; [GO:0006122] mitochondrial electron transport, ubiquinol to cytochrome c; [GO:0005740] mitochondrial envelope; [K00419] ubiquinol-cytochrome c reductase subunit 9 [EC:1.10.2.2]; [GO:0005750] mitochondrial respiratory chain complex III; [1.10.2.2] Ubiquinol--cytochrome-c reductase.; [PF05365] Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like; [KOG3494] Ubiquinol cytochrome c oxidoreductase, subunit QCR934.060.8491
32 Mapoly0053s0096 -34.150.8641
33 Mapoly0006s0190 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG3436] 60S ribosomal protein L35; [PTHR13872] 60S RIBOSOMAL PROTEIN L35; [GO:0005622] intracellular; [PF00831] Ribosomal L29 protein; [GO:0006412] translation; [K02918] large subunit ribosomal protein L35e34.700.8181
34 Mapoly0001s0046 [GO:0016020] membrane; [GO:0009055] electron carrier activity; [KOG3382] NADH:ubiquinone oxidoreductase, B17.2 subunit; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [PF05071] NADH ubiquinone oxidoreductase subunit NDUFA12; [1.6.99.3] NADH dehydrogenase.; [GO:0008137] NADH dehydrogenase (ubiquinone) activity; [K11352] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 12 [EC:1.6.5.3 1.6.99.3]; [PTHR12910] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.236.930.8298
35 Mapoly0003s0068 [KOG1662] Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [K02137] F-type H+-transporting ATPase oligomycin sensitivity conferral protein [EC:3.6.3.14]; [PTHR11910] ATP SYNTHASE DELTA CHAIN; [GO:0015986] ATP synthesis coupled proton transport; [PF00213] ATP synthase delta (OSCP) subunit38.110.8054
36 Mapoly0014s0104 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process39.620.7509
37 Mapoly0051s0097 [PTHR12126:SF1] NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT; [1.6.99.3] NADH dehydrogenase.; [PF13460] NADH(P)-binding; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [KOG2865] NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit; [K03953] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 9 [EC:1.6.5.3 1.6.99.3]; [PTHR12126] NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED39.760.8140
38 Mapoly0052s0053 [PTHR11038] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10; [GO:0045039] protein import into mitochondrial inner membrane; [PF02953] Tim10/DDP family zinc finger; [KOG3480] Mitochondrial import inner membrane translocase, subunits TIM10/TIM1239.950.8119
39 Mapoly0138s0028 -40.310.8054
40 Mapoly0036s0147 [KOG4554] Protein involved in inorganic phosphate transport; [PF10032] Phosphate transport (Pho88)41.440.7817
41 Mapoly0136s0004 [K01904] 4-coumarate--CoA ligase [EC:6.2.1.12]; [PF00501] AMP-binding enzyme; [6.2.1.12] 4-coumarate--CoA ligase.; [KOG1176] Acyl-CoA synthetase; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED41.790.6975
42 Mapoly0016s0041 [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF4] PROTEASOME SUBUNIT BETA TYPE 6,9; [K02738] 20S proteasome subunit beta 1 [EC:3.4.25.1]; [KOG0174] 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA42.330.8293
43 Mapoly0020s0108 [PTHR12022] UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN; [K00417] ubiquinol-cytochrome c reductase subunit 7 [EC:1.10.2.2]; [KOG3440] Ubiquinol cytochrome c reductase, subunit QCR7; [PF02271] Ubiquinol-cytochrome C reductase complex 14kD subunit; [GO:0006122] mitochondrial electron transport, ubiquinol to cytochrome c; [GO:0005750] mitochondrial respiratory chain complex III; [PTHR12022:SF0] SUBFAMILY NOT NAMED; [1.10.2.2] Ubiquinol--cytochrome-c reductase.42.900.8411
44 Mapoly0065s0037 [GO:0005840] ribosome; [PTHR12059] RIBOSOMAL PROTEIN L23-RELATED; [GO:0003735] structural constituent of ribosome; [PF00276] Ribosomal protein L23; [PTHR12059:SF5] SUBFAMILY NOT NAMED; [GO:0006412] translation43.870.8128
45 Mapoly0043s0038 [GO:0005783] endoplasmic reticulum; [KOG3491] Predicted membrane protein; [PF06624] Ribosome associated membrane protein RAMP4; [PTHR15601:SF0] SUBFAMILY NOT NAMED; [PTHR15601] STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN (SERP1/RAMP4)44.160.7955
46 Mapoly0015s0091 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0016679] oxidoreductase activity, acting on diphenols and related substances as donors; [GO:0008121] ubiquinol-cytochrome-c reductase activity; [GO:0055114] oxidation-reduction process; [PF02921] Ubiquinol cytochrome reductase transmembrane region; [KOG1671] Ubiquinol cytochrome c reductase, subunit RIP1; [GO:0016491] oxidoreductase activity; [PTHR10134] CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL; [PF00355] Rieske [2Fe-2S] domain; [1.10.2.2] Ubiquinol--cytochrome-c reductase.; [K00411] ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]; [PTHR10134:SF1] UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT44.410.8034
47 Mapoly0119s0025 [PF06747] CHCH domain; [PTHR13344:SF0] SUBFAMILY NOT NAMED; [1.6.99.3] NADH dehydrogenase.; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating).; [PTHR13344] NADH-UBIQUINONE OXIDOREDUCTASE; [K03952] NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 8 [EC:1.6.5.3 1.6.99.3]44.500.8318
48 Mapoly0008s0272 [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [PTHR11599:SF10] PROTEASOME SUBUNIT ALPHA TYPE 3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA45.830.7820
49 Mapoly0008s0024 [PF10785] NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit47.720.8289
50 Mapoly0054s0060 [KOG1007] WD repeat protein TSSC1, WD repeat superfamily; [GO:0005515] protein binding; [PTHR14205] WD-REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat48.840.7088
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