Guide Gene
- Gene ID
- Mapoly0099s0053
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0046872] metal ion binding
Coexpressed Gene List
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0099s0053 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0046872] metal ion binding 0.00 1.0000 1 Mapoly0068s0092 [GO:0003723] RNA binding; [PF00013] KH domain 1.00 0.8685 2 Mapoly0039s0014 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN 3.61 0.8105 3 Mapoly0105s0060 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [K12898] heterogeneous nuclear ribonucleoprotein F/H; [KOG4211] Splicing factor hnRNP-F and related RNA-binding proteins; [PTHR13976] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED 3.74 0.8443 4 Mapoly0050s0101 [3.4.21.48] Cerevisin.; [K01336] cerevisin [EC:3.4.21.48]; [GO:0004252] serine-type endopeptidase activity; [PF00082] Subtilase family; [PF00090] Thrombospondin type 1 domain; [PF00053] Laminin EGF-like (Domains III and V); [GO:0006508] proteolysis; [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4.00 0.8232 5 Mapoly0009s0028 [PTHR22812] CHROMOBOX PROTEIN; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain 4.90 0.8308 6 Mapoly0001s0378 [PTHR32086] FAMILY NOT NAMED; [K10891] fanconi anemia group D2 protein; [GO:0006281] DNA repair; [KOG4712] Uncharacterized conserved protein; [PF14631] Fanconi anaemia protein FancD2 nuclease 7.42 0.8296 7 Mapoly0001s0028 [KOG1659] Class 2 transcription repressor NC2, alpha subunit (DRAP1); [GO:0005622] intracellular; [GO:0043565] sequence-specific DNA binding; [PTHR10252:SF5] DR1-ASSOCIATED COREPRESSOR; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 8.12 0.7990 8 Mapoly0010s0062 [KOG2250] Glutamate/leucine/phenylalanine/valine dehydrogenases; [GO:0055114] oxidation-reduction process; [PTHR11606] GLUTAMATE DEHYDROGENASE; [GO:0016491] oxidoreductase activity; [PF00208] Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; [K00262] glutamate dehydrogenase (NADP+) [EC:1.4.1.4]; [GO:0006520] cellular amino acid metabolic process; [PTHR11606:SF4] SUBFAMILY NOT NAMED; [1.4.1.4] Glutamate dehydrogenase (NADP(+)).; [PF02812] Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 8.12 0.8312 9 Mapoly0011s0057 [PF13837] Myb/SANT-like DNA-binding domain 8.49 0.8050 10 Mapoly0021s0077 [GO:0005685] U1 snRNP; [GO:0006376] mRNA splice site selection; [PF03194] LUC7 N_terminus; [PTHR12375] RNA-BINDING PROTEIN LUC7-RELATED; [KOG0796] Spliceosome subunit; [GO:0003729] mRNA binding 8.83 0.8259 11 Mapoly0011s0131 [GO:0005524] ATP binding; [PF01928] CYTH domain; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [PTHR10285] URIDINE KINASE 8.94 0.8045 12 Mapoly0159s0020 [K05544] tRNA-dihydrouridine synthase 3 [EC:1.-.-.-]; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PTHR11082:SF8] TRNA-DIHYDROURIDINE SYNTHASE 3; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF01207] Dihydrouridine synthase (Dus); [KOG2333] Uncharacterized conserved protein; [GO:0008033] tRNA processing; [PTHR11082] TRNA-DIHYDROURIDINE SYNTHASE; [GO:0046872] metal ion binding; [GO:0017150] tRNA dihydrouridine synthase activity; [1.-.-.-] Oxidoreductases. 9.95 0.8164 13 Mapoly0019s0028 [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0117] Heterogeneous nuclear ribonucleoprotein R (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10.95 0.8113 14 Mapoly0111s0003 - 12.33 0.8045 15 Mapoly0004s0128 [GO:0005524] ATP binding; [K08864] tousled-like kinase [EC:2.7.11.1]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PTHR22974] MIXED LINEAGE PROTEIN KINASE; [KOG1151] Tousled-like protein kinase 12.65 0.8075 16 Mapoly0001s0120 [PF00225] Kinesin motor domain; [GO:0007018] microtubule-based movement; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [GO:0008017] microtubule binding; [KOG0242] Kinesin-like protein; [GO:0003777] microtubule motor activity; [PTHR24115:SF70] SUBFAMILY NOT NAMED; [GO:0005871] kinesin complex 13.11 0.7748 17 Mapoly0051s0067 [PF00651] BTB/POZ domain; [PTHR24411] FAMILY NOT NAMED; [PF00917] MATH domain; [GO:0005515] protein binding; [KOG1987] Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains 13.86 0.7693 18 Mapoly0013s0062 [GO:0003677] DNA binding; [PTHR15348:SF0] SUBFAMILY NOT NAMED; [PF01388] ARID/BRIGHT DNA binding domain; [GO:0005622] intracellular; [PTHR15348] AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN (ARID DOMAIN- CONTAINING PROTEIN) (DEAD RINGER PROTEIN) (B-CELL REGULATOR OF IGH TRANSCRIPTION) (BRIGHT) 14.70 0.8203 19 Mapoly0113s0034 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF01698] Floricaula / Leafy protein 15.17 0.7988 20 Mapoly0034s0011 [PF09133] SANTA (SANT Associated) 16.12 0.8169 21 Mapoly0001s0015 [PTHR13555] C2H2 ZINC FINGER CGI-62-RELATED 16.43 0.7735 22 Mapoly0014s0141 [PTHR10615:SF81] SUBFAMILY NOT NAMED; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR10615] HISTONE ACETYLTRANSFERASE 17.23 0.7855 23 Mapoly0027s0185 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24056:SF39] CDC2-RELATED PROTEIN KINASE; [KOG0600] Cdc2-related protein kinase; [K08819] Cdc2-related kinase, arginine/serine-rich [EC:2.7.11.22]; [2.7.11.22] Cyclin-dependent kinase.; [PTHR24056] CELL DIVISION PROTEIN KINASE 18.03 0.7976 24 Mapoly0004s0286 [PTHR12663:SF0] SUBFAMILY NOT NAMED; [K11267] sister chromatid cohesion protein PDS5; [PTHR12663] ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (AS3) / PDS5-RELATED; [KOG1525] Sister chromatid cohesion complex Cohesin, subunit PDS5 18.33 0.8239 25 Mapoly0074s0051 [GO:0000287] magnesium ion binding; [PTHR11902] ENOLASE; [PF03952] Enolase, N-terminal domain; [GO:0004634] phosphopyruvate hydratase activity; [GO:0006096] glycolysis; [PF00113] Enolase, C-terminal TIM barrel domain; [4.2.1.11] Phosphopyruvate hydratase.; [GO:0000015] phosphopyruvate hydratase complex; [K01689] enolase [EC:4.2.1.11]; [KOG2670] Enolase 18.33 0.7757 26 Mapoly0002s0222 [KOG1991] Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily); [PF03810] Importin-beta N-terminal domain; [GO:0006886] intracellular protein transport; [PTHR10997] IMPORTIN-7, 8, 11; [GO:0008536] Ran GTPase binding 18.65 0.7224 27 Mapoly0052s0111 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG4206] Spliceosomal protein snRNP-U1A/U2B; [PTHR13976] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED 18.71 0.8084 28 Mapoly0009s0067 [PTHR31789] FAMILY NOT NAMED 19.75 0.7898 29 Mapoly0038s0047 [PTHR20929] LUNG ADENOMA SUSCEPTIBILITY 1-RELATED 20.20 0.7835 30 Mapoly0165s0024 [GO:0006338] chromatin remodeling; [GO:0043968] histone H2A acetylation; [PF00249] Myb-like DNA-binding domain; [K11324] DNA methyltransferase 1-associated protein 1; [GO:0043967] histone H4 acetylation; [KOG2656] DNA methyltransferase 1-associated protein-1; [GO:0003682] chromatin binding; [PTHR12855] FAMILY NOT NAMED; [GO:0035267] NuA4 histone acetyltransferase complex; [GO:0006281] DNA repair; [PTHR12855:SF10] SUBFAMILY NOT NAMED 20.49 0.8006 31 Mapoly0032s0110 [PTHR16219] FAMILY NOT NAMED; [PF14735] HAUS augmin-like complex subunit 4; [GO:0051225] spindle assembly; [GO:0070652] HAUS complex; [PTHR16219:SF1] SUBFAMILY NOT NAMED 22.72 0.7156 32 Mapoly0135s0035 [GO:0003676] nucleic acid binding; [PF02037] SAP domain 23.24 0.8082 33 Mapoly0005s0061 [PF00089] Trypsin; [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis 24.74 0.7811 34 Mapoly0105s0026 - 27.57 0.7784 35 Mapoly0032s0156 [PF14652] Domain of unknown function (DUF4457); [PTHR21534] UNCHARACTERIZED; [PTHR21534:SF0] SUBFAMILY NOT NAMED 28.46 0.7922 36 Mapoly0001s0473 - 30.02 0.8055 37 Mapoly0002s0236 [PTHR10782:SF4] SUBFAMILY NOT NAMED; [PTHR10782] ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [GO:0019789] SUMO ligase activity; [PF02891] MIZ/SP-RING zinc finger 30.40 0.7915 38 Mapoly0038s0101 [K12837] splicing factor U2AF 65 kDa subunit; [PTHR23139] RNA-BINDING PROTEIN; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0120] Splicing factor U2AF, large subunit (RRM superfamily); [GO:0003676] nucleic acid binding; [PTHR23139:SF9] SPLICING FACTOR U2AF LARGE SUBUNIT; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31.02 0.7975 39 Mapoly0060s0055 [PF07748] Glycosyl hydrolases family 38 C-terminal domain; [GO:0015923] mannosidase activity; [KOG1959] Glycosyl hydrolase, family 38 - alpha-mannosidase; [PTHR11607] ALPHA-MANNOSIDASE; [GO:0004559] alpha-mannosidase activity; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0006013] mannose metabolic process; [PF09261] Alpha mannosidase, middle domain; [GO:0005975] carbohydrate metabolic process; [GO:0008270] zinc ion binding; [PF01074] Glycosyl hydrolases family 38 N-terminal domain 31.02 0.7483 40 Mapoly0050s0099 [PF10433] Mono-functional DNA-alkylating methyl methanesulfonate N-term; [KOG1897] Damage-specific DNA binding complex, subunit DDB1 31.18 0.7622 41 Mapoly0005s0267 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others 31.75 0.7979 42 Mapoly0065s0024 - 31.87 0.7160 43 Mapoly0002s0042 [GO:0031011] Ino80 complex; [PTHR13052:SF0] SUBFAMILY NOT NAMED; [PTHR13052] NFRKB-RELATED 32.08 0.7688 44 Mapoly0094s0058 [PTHR12999] FAMILY NOT NAMED; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others 33.67 0.7554 45 Mapoly0010s0132 [KOG4825] Component of synaptic membrane glycine-, glutamate- and thienylcyclohexylpiperidine-binding glycoprotein (43kDa); [PF02151] UvrB/uvrC motif; [GO:0005515] protein binding; [PTHR13371] GLYCINE-, GLUTAMATE-, THIENYLCYCLOHEXYLPIPERIDINE-BINDING PROTEIN; [PTHR13371:SF0] SUBFAMILY NOT NAMED 33.76 0.7234 46 Mapoly0055s0120 - 34.06 0.7903 47 Mapoly0010s0030 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [GO:0005515] protein binding; [PF00439] Bromodomain 34.47 0.7741 48 Mapoly0127s0050 [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00515] Tetratricopeptide repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN; [PF13877] Potential Monad-binding region of RPAP3 35.10 0.7614 49 Mapoly0048s0100 [PTHR18937:SF8] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC3; [GO:0005524] ATP binding; [KOG0964] Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3); [GO:0008280] cohesin core heterodimer; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [GO:0007064] mitotic sister chromatid cohesion; [PTHR18937] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0006281] DNA repair; [GO:0051276] chromosome organization; [GO:0005694] chromosome; [PF06470] SMC proteins Flexible Hinge Domain; [K06669] structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) 35.21 0.7870 50 Mapoly0125s0024 - 36.82 0.7235 51 Mapoly0169s0015 [GO:0006355] regulation of transcription, DNA-dependent; [KOG3149] Transcription initiation factor IIF, auxiliary subunit; [PTHR23195] YEATS DOMAIN; [PF03366] YEATS family; [GO:0005634] nucleus; [K11341] YEATS domain-containing protein 4 36.95 0.7533 52 Mapoly0005s0045 [PF15628] RRM in Demeter; [PTHR10359] A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III 37.42 0.7830 53 Mapoly0109s0055 [PF05186] Dpy-30 motif 39.50 0.7785 54 Mapoly0100s0038 [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0098] GTPase Rab2, small G protein superfamily; [PF15305] Intraflagellar transport protein 43; [PF00071] Ras family; [GO:0005525] GTP binding; [GO:0030991] intraflagellar transport particle A 40.62 0.7479 55 Mapoly0181s0006 [PF13414] TPR repeat; [PTHR14699:SF0] SUBFAMILY NOT NAMED; [PTHR14699] STI2 PROTEIN-RELATED 41.13 0.7699 56 Mapoly0020s0146 - 41.95 0.7364 57 Mapoly0012s0200 [GO:0005685] U1 snRNP; [GO:0006376] mRNA splice site selection; [PF03194] LUC7 N_terminus; [PTHR12375] RNA-BINDING PROTEIN LUC7-RELATED; [KOG0796] Spliceosome subunit; [GO:0003729] mRNA binding 42.07 0.7590 58 Mapoly0091s0060 - 42.64 0.7287 59 Mapoly0042s0086 [PF00488] MutS domain V; [GO:0005524] ATP binding; [KOG0217] Mismatch repair ATPase MSH6 (MutS family); [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [K08737] DNA mismatch repair protein MSH6; [PF05188] MutS domain II; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [PTHR11361:SF31] MUTS HOMOLOG 6, MSH6; [PF01624] MutS domain I; [PF05192] MutS domain III; [PF05190] MutS family domain IV 42.95 0.7779 60 Mapoly0042s0060 [GO:0003677] DNA binding; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PF09239] Topoisomerase VI B subunit, transducer; [GO:0006265] DNA topological change; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [PTHR10871:SF4] 30S RIBOSOMAL PROTEIN S13P/S18E 43.59 0.7312 61 Mapoly0213s0004 [PTHR24012] FAMILY NOT NAMED; [KOG0226] RNA-binding proteins; [GO:0003676] nucleic acid binding; [PTHR24012:SF41] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43.82 0.7304 62 Mapoly0074s0043 [GO:0005685] U1 snRNP; [GO:0006376] mRNA splice site selection; [PF03194] LUC7 N_terminus; [PTHR12375] RNA-BINDING PROTEIN LUC7-RELATED; [GO:0003729] mRNA binding 44.28 0.7808 63 Mapoly0068s0031 [KOG1882] Transcriptional regulator SNIP1, contains FHA domain; [GO:0005515] protein binding; [K13108] smad nuclear-interacting protein 1; [PF00498] FHA domain; [PTHR23308] NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 45.30 0.7612 64 Mapoly0014s0204 [PTHR24012] FAMILY NOT NAMED; [PTHR24012:SF31] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG0148] Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) 45.54 0.7570 65 Mapoly0092s0032 [PTHR22597] POLYCOMB GROUP PROTEIN; [PTHR22597:SF0] SUBFAMILY NOT NAMED; [PF09733] VEFS-Box of polycomb protein 45.61 0.7864 66 Mapoly0027s0148 [PTHR22536] LUNG CANCER METASTASIS-RELATED (LCMR1) PROTEIN 46.00 0.7342 67 Mapoly0041s0116 [PTHR31246] FAMILY NOT NAMED; [PF07058] Myosin II heavy chain-like; [GO:0008017] microtubule binding; [GO:0007010] cytoskeleton organization 48.74 0.7147 68 Mapoly0001s0127 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR15242] SPLICING FACTOR, ARGININE/SERINE-RICH 2,RNAP C-TERM INTERACTING PROTEIN; [PF00628] PHD-finger; [GO:0005515] protein binding 50.33 0.7070 69 Mapoly0020s0002 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0204] Calcium transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase 51.03 0.7395 70 Mapoly0001s0198 [GO:0005524] ATP binding; [2.7.12.1] Dual-specificity kinase.; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [K08825] dual-specificity tyrosine-(Y)-phosphorylation regulated kinase [EC:2.7.12.1]; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [KOG0667] Dual-specificity tyrosine-phosphorylation regulated kinase; [GO:0006468] protein phosphorylation; [PTHR24058:SF22] DUAL SPECIFICITY TYROSINE-PHOSPHORYLATION-REGULATED KINASE 2 51.38 0.6998 71 Mapoly0101s0017 [KOG1294] Apurinic/apyrimidinic endonuclease and related enzymes; [PTHR22748:SF1] AP ENDONUCLEASE; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE 51.93 0.7370 72 Mapoly0007s0146 [KOG4374] RNA-binding protein Bicaudal-C; [PTHR15457] SEC-23 INTERACTING PROTEIN P125; [PF00536] SAM domain (Sterile alpha motif) 52.50 0.7246 73 Mapoly0186s0008 [GO:0003676] nucleic acid binding; [KOG0106] Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily); [PTHR10548] SPLICING FACTOR, ARGININE/SERINE-RICH; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53.96 0.7347 74 Mapoly0197s0019 [PTHR10751] GUANYLATE BINDING PROTEIN; [PTHR10751:SF2] GUANYLATE BINDING PROTEIN; [PF02263] Guanylate-binding protein, N-terminal domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding; [PF02841] Guanylate-binding protein, C-terminal domain 54.65 0.7272 75 Mapoly0029s0099 [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR23336:SF7] SUBFAMILY NOT NAMED; [KOG1845] MORC family ATPases; [PTHR23336] ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 55.93 0.7515 76 Mapoly0132s0046 [PF00855] PWWP domain; [PTHR12550] HEPATOMA-DERIVED GROWTH FACTOR-RELATED; [PTHR12550:SF5] UNCHARACTERIZED 56.28 0.7484 77 Mapoly0023s0117 [PTHR10139] DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11A; [PF04152] Mre11 DNA-binding presumed domain; [KOG2310] DNA repair exonuclease MRE11; [GO:0006259] DNA metabolic process; [PF00149] Calcineurin-like phosphoesterase; [GO:0006302] double-strand break repair; [GO:0016787] hydrolase activity; [GO:0030145] manganese ion binding; [GO:0005634] nucleus; [GO:0004527] exonuclease activity; [K10865] double-strand break repair protein MRE11; [GO:0004519] endonuclease activity 57.45 0.7573 78 Mapoly0043s0021 [KOG0919] C-5 cytosine-specific DNA methylase; [GO:0008168] methyltransferase activity; [PF11926] Domain of unknown function (DUF3444); [PTHR23068:SF2] gb def: Hypothetical protein F8M21_260; [PTHR23068] DNA (CYTOSINE-5-)-METHYLTRANSFERASE 3-RELATED; [PF00145] C-5 cytosine-specific DNA methylase 58.02 0.7275 79 Mapoly0158s0032 [PTHR13561] DNA REPLICATION REGULATOR DPB11-RELATED; [K10728] topoisomerase (DNA) II binding protein 1; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF12738] twin BRCT domain 58.65 0.7386 80 Mapoly0007s0066 [GO:0030915] Smc5-Smc6 complex; [PTHR19306] STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 (SMC5, SMC6); [PTHR19306:SF1] STRUCTURAL MAINTENANCE OF CHROMOSOMES 5 SMC5; [KOG0979] Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0006281] DNA repair; [GO:0000724] double-strand break repair via homologous recombination 59.51 0.7714 81 Mapoly0001s0024 [GO:0005634] nucleus; [GO:0003677] DNA binding; [KOG2402] Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein); [GO:0006352] DNA-dependent transcription, initiation; [GO:0016570] histone modification; [PTHR13115:SF8] SUBFAMILY NOT NAMED; [PF03126] Plus-3 domain; [PTHR13115] UNCHARACTERIZED 59.70 0.7529 82 Mapoly0042s0123 [K12875] apoptotic chromatin condensation inducer in the nucleus; [GO:0003676] nucleic acid binding; [PTHR14127] APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS; [PF02037] SAP domain 61.95 0.7789 83 Mapoly0033s0049 [PF05018] Protein of unknown function (DUF667); [PTHR12458:SF7] SUBFAMILY NOT NAMED; [PTHR12458] ORF PROTEIN 62.20 0.7484 84 Mapoly0067s0005 [PTHR24012] FAMILY NOT NAMED; [PTHR24012:SF39] SUBFAMILY NOT NAMED; [KOG0147] Transcriptional coactivator CAPER (RRM superfamily); [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [K13091] RNA-binding protein 39; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 62.85 0.7674 85 Mapoly0155s0001 [GO:0016597] amino acid binding; [PF01842] ACT domain; [GO:0008152] metabolic process; [PTHR31096] FAMILY NOT NAMED 64.90 0.7422 86 Mapoly0001s0483 [PTHR31447] FAMILY NOT NAMED; [KOG4176] Uncharacterized conserved protein; [PF13532] 2OG-Fe(II) oxygenase superfamily 68.15 0.7242 87 Mapoly0022s0028 [GO:0003677] DNA binding; [PF00249] Myb-like DNA-binding domain; [PF00538] linker histone H1 and H5 family; [GO:0003682] chromatin binding; [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN; [GO:0000786] nucleosome; [GO:0005634] nucleus; [GO:0006334] nucleosome assembly 68.37 0.6631 88 Mapoly0031s0178 [PTHR10098] RAPSYN-RELATED; [GO:0005515] protein binding; [PF13424] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat 68.41 0.6400 89 Mapoly0042s0059 [PTHR16426] UBINUCLEIN/YEMANUCLEIN; [PF08729] HPC2 and ubinuclein domain 68.54 0.7606 90 Mapoly0063s0041 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR23340] ARGININE/SERINE RICH SPLICING FACTOR SF4/14; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PF01805] Surp module 68.70 0.7422 91 Mapoly0070s0095 [PTHR23215] ZINC FINGER PROTEIN 207; [KOG2893] Zn finger protein 69.99 0.7504 92 Mapoly0049s0118 [PTHR32002] FAMILY NOT NAMED; [PF02042] RWP-RK domain 71.23 0.7211 93 Mapoly0004s0308 [PTHR12509:SF8] SPERMATOGENESIS-ASSOCIATED 4; [PF15261] Domain of unknown function (DUF4591); [PF06294] Domain of Unknown Function (DUF1042); [PTHR12509] SPERMATOGENESIS-ASSOCIATED 4-RELATED 71.83 0.6450 94 Mapoly0029s0028 [PF00249] Myb-like DNA-binding domain; [GO:0005515] protein binding; [PF00569] Zinc finger, ZZ type; [GO:0003682] chromatin binding; [GO:0008270] zinc ion binding; [PF04433] SWIRM domain; [PTHR12374] TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED; [KOG0457] Histone acetyltransferase complex SAGA/ADA, subunit ADA2; [K11314] transcriptional adapter 2-alpha 71.85 0.7363 95 Mapoly0104s0019 [KOG2242] Scaffold/matrix specific factor hnRNP-U/SAF-A, contains SPRY domain; [PTHR12381:SF13] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PF13671] AAA domain; [PF00622] SPRY domain; [PTHR12381] RIBONUCLEOPROTEIN 72.46 0.7498 96 Mapoly0026s0020 [KOG2253] U1 snRNP complex, subunit SNU71 and related PWI-motif proteins 74.70 0.7567 97 Mapoly0134s0033 [KOG0739] AAA+-type ATPase; [GO:0005524] ATP binding; [PTHR14690] UNCHARACTERIZED; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR14690:SF0] SUBFAMILY NOT NAMED 74.83 0.6890 98 Mapoly0052s0086 [PF05641] Agenet domain; [PTHR31917] FAMILY NOT NAMED 74.90 0.7662 99 Mapoly0004s0169 [GO:0003677] DNA binding; [GO:0006338] chromatin remodeling; [GO:0005524] ATP binding; [PF09110] HAND; [K11654] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-]; [GO:0043044] ATP-dependent chromatin remodeling; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [GO:0005634] nucleus; [PTHR10799:SF73] ISWI CHROMATIN-REMODELING COMPLEX ATPASE ISW1; [PF00271] Helicase conserved C-terminal domain; [3.6.4.-] Acting on acid anhydrides; involved in cellular and subcellular movement.; [KOG0385] Chromatin remodeling complex WSTF-ISWI, small subunit; [GO:0003676] nucleic acid binding; [GO:0031491] nucleosome binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; [PF09111] SLIDE 74.94 0.7635 100 Mapoly0153s0011 [PF13871] Helicase_C-like; [GO:0006355] regulation of transcription, DNA-dependent; [KOG1513] Nuclear helicase MOP-3/SNO (DEAD-box superfamily); [PTHR12706] STRAWBERRY NOTCH-RELATED; [PF13872] P-loop containing NTP hydrolase pore-1 74.95 0.7633 101 Mapoly0045s0046 - 75.34 0.6977 102 Mapoly0070s0015 [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12780] P-loop containing dynein motor region D4; [PTHR10676:SF137] DYNEIN HEAVY CHAIN 1, AXONEMAL-RELATED; [PF12775] P-loop containing dynein motor region D3; [GO:0005858] axonemal dynein complex; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF12781] ATP-binding dynein motor region D5; [PF08393] Dynein heavy chain, N-terminal region 2; [GO:0003341] cilium movement; [GO:0003777] microtubule motor activity 76.13 0.7121 103 Mapoly0002s0134 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process 77.15 0.7334 104 Mapoly0105s0015 [GO:0003677] DNA binding; [KOG2393] Transcription initiation factor IIF, large subunit (RAP74); [GO:0032968] positive regulation of transcription elongation from RNA polymerase II promoter; [K03138] transcription initiation factor TFIIF subunit alpha; [PF05793] Transcription initiation factor IIF, alpha subunit (TFIIF-alpha); [PTHR13011] TFIIF-ALPHA; [GO:0005634] nucleus; [GO:0006367] transcription initiation from RNA polymerase II promoter 77.95 0.7298 105 Mapoly0014s0220 [GO:0006355] regulation of transcription, DNA-dependent; [K11308] histone acetyltransferase MYST1 [EC:2.3.1.48]; [PF11717] RNA binding activity-knot of a chromodomain; [PTHR10615] HISTONE ACETYLTRANSFERASE; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [GO:0005634] nucleus; [PF01853] MOZ/SAS family; [2.3.1.48] Histone acetyltransferase.; [KOG2747] Histone acetyltransferase (MYST family) 81.90 0.7040 106 Mapoly0080s0034 [2.1.1.43] Histone-lysine N-methyltransferase.; [KOG1082] Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [K11419] histone-lysine N-methyltransferase SUV39H [EC:2.1.1.43]; [PF05033] Pre-SET motif; [GO:0005515] protein binding; [PF00856] SET domain; [GO:0008270] zinc ion binding; [GO:0018024] histone-lysine N-methyltransferase activity; [PTHR22884] SET DOMAIN PROTEINS; [GO:0005634] nucleus; [GO:0034968] histone lysine methylation; [PF13771] PHD-like zinc-binding domain 82.50 0.7398 107 Mapoly0060s0056 [GO:0008168] methyltransferase activity; [PTHR10629] CYTOSINE-SPECIFIC METHYLTRANSFERASE; [PF01426] BAH domain; [GO:0003682] chromatin binding; [K00558] DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain; [PF00145] C-5 cytosine-specific DNA methylase; [2.1.1.37] DNA (cytosine-5-)-methyltransferase. 83.62 0.7477 108 Mapoly0022s0046 [PTHR31691] FAMILY NOT NAMED; [PF14726] Rotatin, an armadillo repeat protein, centriole functioning 83.84 0.7294 109 Mapoly0027s0147 [PTHR12585] SCC1 / RAD21 FAMILY MEMBER; [PF04824] Conserved region of Rad21 / Rec8 like protein; [GO:0005515] protein binding; [PF04825] N terminus of Rad21 / Rec8 like protein; [K06670] cohesin complex subunit SCC1; [GO:0000228] nuclear chromosome; [KOG1213] Sister chromatid cohesion complex Cohesin, subunit RAD21/SCC1 84.25 0.7456 110 Mapoly0033s0045 - 84.85 0.7091 111 Mapoly0001s0528 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0758] Mitochondrial carnitine-acylcarnitine carrier protein 85.17 0.6765 112 Mapoly0117s0005 [K13109] IK cytokine; [PTHR12765] RED PROTEIN (IK FACTOR) (CYTOKINE IK); [KOG2498] IK cytokine down-regulator of HLA class II; [PF07807] RED-like protein C-terminal region; [PTHR12765:SF5] RED PROTEIN (IK FACTOR) (CYTOKINE IK); [GO:0005634] nucleus; [PF07808] RED-like protein N-terminal region 85.38 0.7354 113 Mapoly0104s0010 [PTHR17204:SF5] PRE-MRNA PROCESSING PROTEIN PRP39-RELATED; [K13217] pre-mRNA-processing factor 39; [KOG1258] mRNA processing protein; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF05843] Suppressor of forked protein (Suf); [PTHR17204] PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 85.86 0.7301 114 Mapoly0001s0273 [PTHR10501] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; [PTHR10501:SF0] SMALL NUCLEAR RIBONUCLEOPROTEIN; [GO:0000398] mRNA splicing, via spliceosome; [GO:0003676] nucleic acid binding; [GO:0017069] snRNA binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 86.98 0.7394 115 Mapoly0072s0079 [PF11717] RNA binding activity-knot of a chromodomain; [K11339] mortality factor 4-like protein 1; [GO:0005634] nucleus; [PTHR10880] MORTALITY FACTOR 4-LIKE PROTEIN; [PF05712] MRG 87.64 0.7551 116 Mapoly0063s0002 [PF01480] PWI domain; [K13171] serine/arginine repetitive matrix protein 1; [PTHR23148] SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN; [GO:0006397] mRNA processing; [KOG2146] Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain) 88.86 0.7319 117 Mapoly0148s0032 [PF01480] PWI domain; [PTHR18806:SF4] SUBFAMILY NOT NAMED; [GO:0006397] mRNA processing; [PTHR18806] RBM25 PROTEIN; [GO:0003676] nucleic acid binding; [K12822] RNA-binding protein 25; [KOG2253] U1 snRNP complex, subunit SNU71 and related PWI-motif proteins; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89.17 0.7484 118 Mapoly0036s0123 [GO:0000922] spindle pole; [PTHR19302:SF13] GAMMA-TUBULIN COMPLEX COMPONENT 2 (GCP-2); [PF04130] Spc97 / Spc98 family; [GO:0005815] microtubule organizing center; [GO:0000226] microtubule cytoskeleton organization; [PTHR19302] GAMMA TUBULIN COMPLEX PROTEIN; [KOG2001] Gamma-tubulin complex, DGRIP84/SPC97 component 89.30 0.7622 119 Mapoly0009s0012 [KOG0113] U1 small nuclear ribonucleoprotein (RRM superfamily); [PTHR13952] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD; [GO:0003676] nucleic acid binding; [K13155] U11/U12 small nuclear ribonucleoprotein 35 kDa protein; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90.31 0.6769 120 Mapoly0001s0348 [KOG1342] Histone deacetylase complex, catalytic component RPD3; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE 90.90 0.7004 121 Mapoly0009s0161 [PTHR15606:SF4] SUBFAMILY NOT NAMED; [PF00226] DnaJ domain; [PTHR15606] DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED; [KOG1150] Predicted molecular chaperone (DnaJ superfamily); [K09528] DnaJ homolog subfamily C member 8 91.31 0.6356 122 Mapoly0167s0006 - 92.79 0.7262 123 Mapoly0012s0166 [PF09405] CASC3/Barentsz eIF4AIII binding; [PTHR22814:SF47] HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN; [PTHR22814] COPPER TRANSPORT PROTEIN ATOX1-RELATED 93.49 0.7232 124 Mapoly0048s0088 [PF00397] WW domain; [GO:0005515] protein binding; [K12824] transcription elongation regulator 1; [PTHR15377:SF3] SUBFAMILY NOT NAMED; [PTHR15377] TRANSCRIPTION FACTOR CA150B RELATEDTCERG1; [PF01846] FF domain; [KOG0155] Transcription factor CA150 94.10 0.7467 125 Mapoly0006s0033 [PF02373] JmjC domain, hydroxylase; [PTHR12549] JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; [PF08879] WRC 94.11 0.7001 126 Mapoly0114s0031 - 95.92 0.6928 127 Mapoly0002s0191 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG4300] Predicted methyltransferase 97.21 0.6521 128 Mapoly0050s0017 [PTHR31587] FAMILY NOT NAMED; [PF10225] Uncharacterized conserved protein (DUF2215) 98.62 0.6339 129 Mapoly0009s0036 [KOG4259] Putative nucleic acid-binding protein Hcc-1/proliferation associated cytokine-inducible protein, contains SAP domain; [GO:0003676] nucleic acid binding; [PTHR21594] NUCLEAR PROTEIN HCC-1/THO1; [PF02037] SAP domain 98.63 0.7061 130 Mapoly0041s0101 [GO:0005524] ATP binding; [K02603] origin recognition complex subunit 1; [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR10763:SF6] ORIGIN RECOGNITION COMPLEX SUBUNIT 1; [KOG1514] Origin recognition complex, subunit 1, and related proteins; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR10763] CELL DIVISION CONTROL PROTEIN 6-RELATED 99.60 0.7029 131 Mapoly0065s0033 [GO:0003723] RNA binding; [3.1.26.5] Ribonuclease P.; [K03538] ribonuclease P protein subunit POP4 [EC:3.1.26.5]; [GO:0000172] ribonuclease MRP complex; [PF01868] Domain of unknown function UPF0086; [PTHR13348] RIBONUCLEASE P; [GO:0006364] rRNA processing; [GO:0008033] tRNA processing; [GO:0030677] ribonuclease P complex; [GO:0006379] mRNA cleavage; [KOG4046] RNase MRP and P, subunit POP4/p29; [GO:0004540] ribonuclease activity 101.32 0.6974 132 Mapoly0094s0033 [GO:0016567] protein ubiquitination; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [KOG0314] Predicted E3 ubiquitin ligase; [GO:0005634] nucleus; [PF08783] DWNN domain; [GO:0003676] nucleic acid binding; [GO:0004842] ubiquitin-protein ligase activity; [PTHR15439] RETINOBLASTOMA-BINDING PROTEIN 6; [PF04564] U-box domain 103.20 0.6843 133 Mapoly0041s0148 [PF01426] BAH domain; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR 104.98 0.7090 134 Mapoly0226s0007 [PF00817] impB/mucB/samB family; [2.7.7.7] DNA-directed DNA polymerase.; [GO:0006281] DNA repair; [PF11799] impB/mucB/samB family C-terminal domain; [PTHR11076] DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; [PTHR11076:SF11] DNA POLYMERASE ETA; [GO:0003887] DNA-directed DNA polymerase activity; [GO:0003684] damaged DNA binding; [K03509] DNA polymerase eta subunit [EC:2.7.7.7] 105.00 0.6721 135 Mapoly0028s0116 [PTHR22884] SET DOMAIN PROTEINS 106.76 0.7421 136 Mapoly0069s0030 [PF03735] ENT domain; [KOG4675] Uncharacterized conserved protein, contains ENT domain 106.76 0.6619 137 Mapoly0016s0078 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [KOG0103] Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily; [PTHR19375:SF78] SUBFAMILY NOT NAMED; [PF00012] Hsp70 protein 107.02 0.6996 138 Mapoly0005s0067 [PTHR15242:SF0] SUBFAMILY NOT NAMED; [PTHR15242] SPLICING FACTOR, ARGININE/SERINE-RICH 2,RNAP C-TERM INTERACTING PROTEIN; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0046872] metal ion binding 107.40 0.7445 139 Mapoly0072s0033 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family 108.47 0.6933 140 Mapoly0058s0108 [GO:0003677] DNA binding; [KOG0214] RNA polymerase II, second largest subunit; [PF04567] RNA polymerase Rpb2, domain 5; [PF04565] RNA polymerase Rpb2, domain 3; [PTHR20856] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [PF00562] RNA polymerase Rpb2, domain 6; [PF04566] RNA polymerase Rpb2, domain 4; [GO:0032549] ribonucleoside binding; [PF04561] RNA polymerase Rpb2, domain 2; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04560] RNA polymerase Rpb2, domain 7; [PF04563] RNA polymerase beta subunit 108.59 0.7139 141 Mapoly0008s0041 - 108.89 0.7049 142 Mapoly0053s0080 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF12230] Pre-mRNA splicing factor PRP21 like protein; [GO:0005515] protein binding; [PTHR15316:SF1] SPLICEOSOME ASSOCIATED PROTEIN 114; [PF00240] Ubiquitin family; [K12825] splicing factor 3A subunit 1; [PTHR15316] SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED; [PF01805] Surp module; [KOG0007] Splicing factor 3a, subunit 1 109.47 0.7243 143 Mapoly0072s0016 [GO:0005515] protein binding; [PTHR15398] BROMODOMAIN-CONTAINING PROTEIN 8; [PF00439] Bromodomain; [K11321] bromodomain-containing protein 8; [PTHR15398:SF0] SUBFAMILY NOT NAMED 109.95 0.7040 144 Mapoly0043s0128 [KOG0381] HMG box-containing protein; [GO:0003677] DNA binding; [PF00505] HMG (high mobility group) box; [PF01388] ARID/BRIGHT DNA binding domain; [PTHR13711] SWI/SNF-RELATED CHROMATIN BINDING PROTEIN; [GO:0005622] intracellular 111.13 0.7154 145 Mapoly0015s0045 [KOG0533] RRM motif-containing protein; [PTHR19965] RNA AND EXPORT FACTOR BINDING PROTEIN; [K12881] THO complex subunit 4; [PF13865] C-terminal duplication domain of Friend of PRMT1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114.17 0.7142 146 Mapoly0060s0063 - 114.66 0.6976 147 Mapoly0051s0023 [PF00488] MutS domain V; [GO:0005524] ATP binding; [KOG0217] Mismatch repair ATPase MSH6 (MutS family); [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [PF05188] MutS domain II; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [PF01624] MutS domain I; [PF05192] MutS domain III 115.18 0.7520 148 Mapoly0039s0088 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation 115.33 0.6973 149 Mapoly0098s0013 [KOG1634] Predicted transcription factor DATF1, contains PHD and TFS2M domains; [PF07500] Transcription factor S-II (TFIIS), central domain; [PTHR11477] TRANSCRIPTION ELONGATION FACTOR S-II; [GO:0006351] transcription, DNA-dependent; [PF07744] SPOC domain 115.89 0.7191 150 Mapoly0125s0028 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0205] Plasma membrane H+-transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase 116.89 0.7236 151 Mapoly0027s0186 [GO:0005524] ATP binding; [K10866] DNA repair protein RAD50 [EC:3.6.-.-]; [PF13476] AAA domain; [GO:0008270] zinc ion binding; [PF04423] Rad50 zinc hook motif; [3.6.-.-] Acting on acid anhydrides.; [GO:0006281] DNA repair; [KOG0962] DNA repair protein RAD50, ABC-type ATPase/SMC superfamily; [PTHR18867:SF12] SUBFAMILY NOT NAMED; [PTHR18867] RAD50; [GO:0004518] nuclease activity; [GO:0030870] Mre11 complex; [PF13558] Putative exonuclease SbcCD, C subunit 118.49 0.7266 152 Mapoly0033s0088 [GO:0005515] protein binding; [PTHR19918:SF8] gb def: Meiosis-specific APC/C activator protein AMA1 (Activator of meiotic APC/C protei; [KOG0305] Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits; [K03363] cell division cycle 20, cofactor of APC complex; [PTHR19918] CELL DIVISION CYCLE 20 (CDC20) (FIZZY)-RELATED; [PF00400] WD domain, G-beta repeat 119.50 0.7115 153 Mapoly0096s0052 [PTHR16275] FAMILY NOT NAMED 119.50 0.6747 154 Mapoly0154s0022 [GO:0003723] RNA binding; [GO:0016787] hydrolase activity; [PTHR23114] FAMILY NOT NAMED; [PF05026] Dcp2, box A domain; [GO:0030145] manganese ion binding; [PTHR23114:SF9] SUBFAMILY NOT NAMED; [3.-.-.-] Hydrolases.; [KOG2839] Diadenosine and diphosphoinositol polyphosphate phosphohydrolase; [PF00293] NUDIX domain; [K12613] mRNA-decapping enzyme subunit 2 [EC:3.-.-.-] 119.76 0.6878 155 Mapoly0118s0038 - 119.96 0.7216 156 Mapoly0016s0079 [GO:0005524] ATP binding; [KOG2680] DNA helicase TIP49, TBP-interacting protein; [3.6.4.12] DNA helicase.; [PF06068] TIP49 C-terminus; [GO:0043141] ATP-dependent 5'-3' DNA helicase activity; [K11338] RuvB-like protein 2 [EC:3.6.4.12]; [GO:0003678] DNA helicase activity; [PTHR11093] RUVB-RELATED REPTIN AND PONTIN; [PTHR11093:SF2] RUVB-LIKE 2 (REPTIN) 120.37 0.7164 157 Mapoly0016s0080 [K14399] polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]; [PF03205] Molybdopterin guanine dinucleotide synthesis protein B; [KOG2749] mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1; [2.7.1.78] Polynucleotide 5'-hydroxyl-kinase.; [PTHR12755] CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P; [PF06807] Pre-mRNA cleavage complex II protein Clp1 120.96 0.7178 158 Mapoly0046s0091 [GO:0000278] mitotic cell cycle; [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [KOG1427] Uncharacterized conserved protein, contains RCC1 domain; [PF00415] Regulator of chromosome condensation (RCC1) repeat; [GO:0051301] cell division; [GO:0007032] endosome organization 123.00 0.7187 159 Mapoly0042s0047 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0387] Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [PF00271] Helicase conserved C-terminal domain; [PTHR10799:SF65] DNA REPAIR AND RECOMBINATION PROTEIN RAD26-RELATED 123.21 0.7240 160 Mapoly0153s0042 - 123.60 0.6305 161 Mapoly0061s0078 [KOG1361] Predicted hydrolase involved in interstrand cross-link repair; [PTHR23240] DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED; [PF12706] Beta-lactamase superfamily domain; [PF07522] DNA repair metallo-beta-lactamase; [PF00536] SAM domain (Sterile alpha motif) 124.38 0.7203 162 Mapoly0021s0138 [KOG1548] Transcription elongation factor TAT-SF1; [GO:0005515] protein binding; [K13093] HIV Tat-specific factor 1; [PF02213] GYF domain; [PTHR15608] SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2; [PF14237] Domain of unknown function (DUF4339); [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 124.40 0.7089 163 Mapoly0001s0322 [PTHR24022:SF20] PROGRAMMED CELL DEATH PROTEIN 7; [PTHR24022] COMPLEMENT C1Q-RELATED 124.88 0.6801 164 Mapoly0112s0002 [PF14750] Integrator complex subunit 2; [K13139] integrator complex subunit 2; [GO:0032039] integrator complex 125.43 0.6980 165 Mapoly0013s0097 - 126.69 0.6496 166 Mapoly0001s0037 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [KOG2659] LisH motif-containing protein; [PF10607] CTLH/CRA C-terminal to LisH motif domain 128.10 0.6646 167 Mapoly0063s0071 [GO:0005515] protein binding; [K12176] COP9 signalosome complex subunit 2; [KOG1464] COP9 signalosome, subunit CSN2; [PF01399] PCI domain; [PTHR10678] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 129.31 0.6909 168 Mapoly0107s0024 [GO:0005524] ATP binding; [GO:0046982] protein heterodimerization activity; [KOG0018] Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1); [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR18937:SF12] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC1; [GO:0007064] mitotic sister chromatid cohesion; [PTHR18937] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0008278] cohesin complex; [GO:0051276] chromosome organization; [GO:0005694] chromosome; [PF06470] SMC proteins Flexible Hinge Domain; [K06636] structural maintenance of chromosome 1 129.42 0.7175 169 Mapoly0005s0111 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 130.38 0.6984 170 Mapoly0015s0164 [GO:0003677] DNA binding; [PF02362] B3 DNA binding domain; [PTHR31391] FAMILY NOT NAMED 131.00 0.7199 171 Mapoly0001s0288 [KOG3809] Microtubule-binding protein MIP-T3; [PTHR31363:SF0] SUBFAMILY NOT NAMED; [GO:0008017] microtubule binding; [PF10243] Microtubule-binding protein MIP-T3; [PTHR31363] FAMILY NOT NAMED 131.08 0.6860 172 Mapoly0011s0219 - 131.33 0.6900 173 Mapoly0009s0087 [PTHR24011:SF38] SUBFAMILY NOT NAMED; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0117] Heterogeneous nuclear ribonucleoprotein R (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 132.18 0.6907 174 Mapoly0013s0166 [KOG1731] FAD-dependent sulfhydryl oxidase/quiescin and related proteins; [GO:0016972] thiol oxidase activity; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PTHR22897:SF8] SUBFAMILY NOT NAMED; [PTHR22897] QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE; [PF04777] Erv1 / Alr family; [PF00085] Thioredoxin 134.23 0.6637 175 Mapoly0028s0103 [PF01713] Smr domain; [GO:0003677] DNA binding; [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [K07456] DNA mismatch repair protein MutS2; [GO:0016887] ATPase activity; [PTHR11361:SF14] DNA MISMATCH REPAIR PROTEIN MUTS2; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [GO:0045910] negative regulation of DNA recombination 135.50 0.6158 176 Mapoly0104s0042 [PTHR22846:SF2] TRANSDUCIN BETA-LIKE 1; [GO:0005515] protein binding; [PTHR22846] WD40 REPEAT PROTEIN; [KOG0273] Beta-transducin family (WD-40 repeat) protein; [PF08513] LisH; [PF00400] WD domain, G-beta repeat 135.76 0.7157 177 Mapoly0007s0100 [PTHR15828] CYTOKINE RECEPTOR-LIKE FACTOR 3 138.40 0.7189 178 Mapoly0037s0008 [PF10250] GDP-fucose protein O-fucosyltransferase; [PTHR31741] FAMILY NOT NAMED 140.36 0.6327 179 Mapoly0042s0007 [GO:0003677] DNA binding; [K02213] cell division control protein 6; [KOG2227] Pre-initiation complex, subunit CDC6, AAA+ superfamily ATPase; [PF13401] AAA domain; [PF01429] Methyl-CpG binding domain; [GO:0005634] nucleus; [PF09079] CDC6, C terminal; [PTHR10763] CELL DIVISION CONTROL PROTEIN 6-RELATED 141.11 0.7153 180 Mapoly0013s0006 [GO:0008270] zinc ion binding; [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR23336] ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.; [PF07496] CW-type Zinc Finger 141.54 0.7029 181 Mapoly0039s0120 [KOG1805] DNA replication helicase; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PTHR10887:SF14] DNA2-LIKE HELICASE; [3.6.4.12] DNA helicase.; [PF13086] AAA domain; [GO:0033567] DNA replication, Okazaki fragment processing; [PF01930] Domain of unknown function DUF83; [GO:0017108] 5'-flap endonuclease activity; [GO:0043142] single-stranded DNA-dependent ATPase activity; [PF13087] AAA domain; [PF08696] DNA replication factor Dna2; [K10742] DNA replication ATP-dependent helicase Dna2 [EC:3.6.4.12] 141.59 0.7003 182 Mapoly0126s0040 [PTHR11062] EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED; [KOG1021] Acetylglucosaminyltransferase EXT1/exostosin 1; [PF03016] Exostosin family 142.01 0.6559 183 Mapoly0083s0015 [PTHR10676:SF136] DYNEIN HEAVY CHAIN 6, AXONEMAL-RELATED; [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12780] P-loop containing dynein motor region D4; [GO:0005524] ATP binding; [PF12775] P-loop containing dynein motor region D3; [GO:0005858] axonemal dynein complex; [GO:0001539] ciliary or flagellar motility; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [PF07728] AAA domain (dynein-related subfamily); [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF08393] Dynein heavy chain, N-terminal region 2; [PF12781] ATP-binding dynein motor region D5; [GO:0003777] microtubule motor activity 142.94 0.7085 184 Mapoly0045s0049 - 143.56 0.6779 185 Mapoly0065s0086 [PTHR22069:SF0] SUBFAMILY NOT NAMED; [PTHR22069] MITOCHONDRIAL RIBOSOMAL PROTEIN S18 143.72 0.6726 186 Mapoly0002s0028 [PF00630] Filamin/ABP280 repeat; [GO:0003676] nucleic acid binding; [KOG0146] RNA-binding protein ETR-3 (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 143.78 0.7129 187 Mapoly0034s0031 [GO:0007094] mitotic spindle assembly checkpoint; [K06638] mitotic spindle assembly checkpoint protein MAD1; [KOG4593] Mitotic checkpoint protein MAD1; [PTHR23168] MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 (MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1); [PF05557] Mitotic checkpoint protein; [PTHR23168:SF0] SUBFAMILY NOT NAMED 145.26 0.7290 188 Mapoly0096s0020 [GO:0005524] ATP binding; [PF02359] Cell division protein 48 (CDC48), N-terminal domain; [PF02933] Cell division protein 48 (CDC48), domain 2; [PF00004] ATPase family associated with various cellular activities (AAA); [K13525] transitional endoplasmic reticulum ATPase; [PTHR23077] AAA-FAMILY ATPASE; [KOG0730] AAA+-type ATPase 145.72 0.7125 189 Mapoly0080s0093 [GO:0003677] DNA binding; [PF00046] Homeobox domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR12628] POLYCOMB-LIKE TRANSCRIPTION FACTOR 146.88 0.7022 190 Mapoly0028s0110 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [PTHR23069:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PF00439] Bromodomain; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0732] AAA+-type ATPase containing the bromodomain 149.70 0.7135 191 Mapoly0005s0105 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 150.02 0.6728 192 Mapoly0015s0073 [PF12780] P-loop containing dynein motor region D4; [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12775] P-loop containing dynein motor region D3; [GO:0005858] axonemal dynein complex; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF08393] Dynein heavy chain, N-terminal region 2; [PF12781] ATP-binding dynein motor region D5; [GO:0003341] cilium movement; [PTHR10676:SF138] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [GO:0003777] microtubule motor activity 150.05 0.6750 193 Mapoly0021s0042 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [KOG0298] DEAD box-containing helicase-like transcription factor/DNA repair protein; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain 150.99 0.7059 194 Mapoly0013s0200 [PF06565] Repeat of unknown function (DUF1126); [PTHR12086] EF-HAND DOMAIN (C-TERMINAL) CONTAINING PROTEIN; [KOG0043] Uncharacterized conserved protein, contains DM10 domain 151.56 0.6809 195 Mapoly0008s0243 - 154.30 0.6671 196 Mapoly0013s0011 [PTHR24012] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG0148] Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) 155.52 0.7120 197 Mapoly0079s0030 [KOG0543] FKBP-type peptidyl-prolyl cis-trans isomerase; [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF13414] TPR repeat; [GO:0006457] protein folding; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase 155.54 0.6192 198 Mapoly0016s0027 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF02170] PAZ domain; [PTHR14950] HELICASE-RELATED; [GO:0005515] protein binding; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity 155.79 0.6478 199 Mapoly0028s0074 [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [PF00855] PWWP domain; [PTHR22981:SF27] SUBFAMILY NOT NAMED 156.56 0.5385 200 Mapoly0043s0082 [PF07899] Frigida-like protein; [PTHR31791] FAMILY NOT NAMED 156.92 0.6899