Guide Gene

Gene ID
Mapoly0099s0027
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [GO:0016874] ligase activity; [GO:0009058] biosynthetic process; [PF02875] Mur ligase family, glutamate ligase domain; [PTHR23135] MUR LIGASE FAMILY MEMBER; [PTHR23135:SF2] UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0099s0027 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [GO:0016874] ligase activity; [GO:0009058] biosynthetic process; [PF02875] Mur ligase family, glutamate ligase domain; [PTHR23135] MUR LIGASE FAMILY MEMBER; [PTHR23135:SF2] UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE 0.00 1.0000
1 Mapoly0056s0097 [GO:0005524] ATP binding; [K01103] 6-phosphofructo-2-kinase / fructose-2,6-bisphosphatase [EC:2.7.1.105 3.1.3.46]; [KOG0234] Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase; [PF00686] Starch binding domain; [GO:0006000] fructose metabolic process; [PTHR10606] 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE; [GO:0003824] catalytic activity; [3.1.3.46] Fructose-2,6-bisphosphate 2-phosphatase.; [GO:0003873] 6-phosphofructo-2-kinase activity; [PF01591] 6-phosphofructo-2-kinase; [GO:0006003] fructose 2,6-bisphosphate metabolic process; [PF00300] Histidine phosphatase superfamily (branch 1); [2.7.1.105] 6-phosphofructo-2-kinase.6.710.6103
2 Mapoly0060s0015 [PF00782] Dual specificity phosphatase, catalytic domain; [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; [GO:0006470] protein dephosphorylation; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity7.210.6569
3 Mapoly0003s0271 [PTHR31636] FAMILY NOT NAMED; [PF03514] GRAS domain family8.490.6052
4 Mapoly0100s0048 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K00703] starch synthase [EC:2.4.1.21]; [PF08323] Starch synthase catalytic domain; [PTHR12526] GLYCOSYLTRANSFERASE; [2.4.1.21] Starch synthase.8.830.6642
5 Mapoly0045s0140 [PTHR21004] SERINE PROTEASE-RELATED; [PTHR21004:SF0] SUBFAMILY NOT NAMED; [PF13365] Trypsin-like peptidase domain16.850.5140
6 Mapoly0036s0021 [GO:0080048] GDP-D-glucose phosphorylase activity; [K14190] GDP-L-galactose phosphorylase [EC:2.7.7.69]; [PTHR20884] FAMILY NOT NAMED; [KOG2720] Predicted hydrolase (HIT family); [2.7.7.69] GDP-L-galactose phosphorylase.17.350.6072
7 Mapoly0033s0056 [PF06203] CCT motif; [PTHR31319] FAMILY NOT NAMED; [GO:0005515] protein binding24.920.5687
8 Mapoly0033s0050 [PTHR10357] ALPHA-AMYLASE; [PF00686] Starch binding domain; [GO:0003824] catalytic activity27.280.6242
9 Mapoly0027s0033 [PTHR31832] FAMILY NOT NAMED; [GO:0008270] zinc ion binding; [GO:0005622] intracellular; [PF00643] B-box zinc finger28.880.6100
10 Mapoly0021s0092 [K01456] peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase [EC:3.5.1.52]; [PTHR12143] PEPTIDE N-GLYCANASE (PNGASE)-RELATED; [PF01841] Transglutaminase-like superfamily; [3.5.1.52] Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.28.980.5824
11 Mapoly0061s0112 -38.880.6193
12 Mapoly0007s0253 [K00696] sucrose-phosphate synthase [EC:2.4.1.14]; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [PF13579] Glycosyl transferase 4-like domain; [KOG0853] Glycosyltransferase; [PF05116] Sucrose-6F-phosphate phosphohydrolase; [PTHR12526] GLYCOSYLTRANSFERASE; [2.4.1.14] Sucrose-phosphate synthase.42.740.5947
13 Mapoly0088s0023 [PF10184] Uncharacterized conserved protein (DUF2358); [PF04832] SOUL heme-binding protein; [PTHR11220:SF1] HEME-BINDING PROTEIN-RELATED; [PTHR11220] HEME-BINDING PROTEIN-RELATED43.710.5859
14 Mapoly0091s0004 [1.2.1.16] Succinate-semialdehyde dehydrogenase (NAD(P)(+)).; [K00135] succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]; [GO:0055114] oxidation-reduction process; [KOG2451] Aldehyde dehydrogenase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [PF00171] Aldehyde dehydrogenase family; [PTHR11699:SF49] SUCCINATE SEMIALDEHYDE DEHYDROGENASE57.450.5932
15 Mapoly0061s0127 [GO:0006808] regulation of nitrogen utilization; [PF00543] Nitrogen regulatory protein P-II; [GO:0030234] enzyme regulator activity; [PTHR30115] NITROGEN REGULATORY PROTEIN P-II58.690.5868
16 Mapoly0021s0019 -59.060.5551
17 Mapoly0142s0030 [GO:0016020] membrane; [GO:0005524] ATP binding; [KOG0061] Transporter, ABC superfamily (Breast cancer resistance protein); [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF00005] ABC transporter61.480.5489
18 Mapoly0029s0015 [GO:0003677] DNA binding; [PF00046] Homeobox domain; [PTHR24326] FAMILY NOT NAMED68.120.5762
19 Mapoly0012s0053 [PTHR12595] POS9-ACTIVATING FACTOR FAP7-RELATED; [KOG3347] Predicted nucleotide kinase/nuclear protein involved oxidative stress response; [PTHR12595:SF0] SUBFAMILY NOT NAMED; [K14535] transcription initiation factor TFIID subunit 9 / adenylate kinase [EC:2.7.4.3]; [2.7.4.3] Adenylate kinase.; [PF13238] AAA domain71.550.5812
20 Mapoly0101s0064 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1429] dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase; [5.1.3.-] Acting on carbohydrates and derivatives.; [5.1.3.18] GDP-mannose 3,5-epimerase.; [GO:0050662] coenzyme binding; [K10046] GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE72.060.5914
21 Mapoly0014s0104 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process76.790.5727
22 Mapoly0006s0095 [GO:0016020] membrane; [KOG4267] Predicted membrane protein; [PTHR12668] TRANSMEMBRANE PROTEIN 14, 15; [PF03647] Transmembrane proteins 14C83.120.5320
23 Mapoly0003s0307 [PF03055] Retinal pigment epithelial membrane protein; [PTHR10543:SF24] SUBFAMILY NOT NAMED; [PTHR10543] BETA-CAROTENE DIOXYGENASE; [K11159] carotenoid cleavage dioxygenase; [KOG1285] Beta, beta-carotene 15,15'-dioxygenase and related enzymes83.790.5790
24 Mapoly0052s0055 [GO:0016020] membrane; [GO:0005452] inorganic anion exchanger activity; [K13857] solute carrier family 4 (sodium bicarbonate cotransporter), member 5; [GO:0016021] integral to membrane; [GO:0006820] anion transport; [PF00955] HCO3- transporter family; [PTHR11453] ANION EXCHANGE PROTEIN83.830.5854
25 Mapoly0001s0423 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase86.340.5737
26 Mapoly0002s0259 [K01897] long-chain acyl-CoA synthetase [EC:6.2.1.3]; [PF00501] AMP-binding enzyme; [6.2.1.3] Long-chain-fatty-acid--CoA ligase.; [KOG1180] Acyl-CoA synthetase; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED86.880.4608
27 Mapoly0041s0075 [GO:0005506] iron ion binding; [PTHR17130] MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25; [PF00301] Rubredoxin89.050.5190
28 Mapoly0073s0071 [GO:0016787] hydrolase activity; [PF07687] Peptidase dimerisation domain; [3.5.1.14] Aminoacylase.; [PTHR11014] PEPTIDASE M20 FAMILY MEMBER; [GO:0008152] metabolic process; [PF01546] Peptidase family M20/M25/M40; [K14677] aminoacylase [EC:3.5.1.14]; [KOG2275] Aminoacylase ACY1 and related metalloexopeptidases91.660.5551
29 Mapoly0043s0007 -91.820.5561
30 Mapoly0019s0057 [GO:0003676] nucleic acid binding; [PTHR24622] FAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)92.370.5466
31 Mapoly0117s0032 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)93.470.5572
32 Mapoly0124s0059 -96.610.5600
33 Mapoly0002s0218 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis101.020.5777
34 Mapoly0042s0066 [PF09713] Plant protein 1589 of unknown function (A_thal_3526); [PTHR31871] FAMILY NOT NAMED101.330.5502
35 Mapoly0117s0031 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)105.370.5212
36 Mapoly0032s0014 [KOG1529] Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase; [PF00581] Rhodanese-like domain; [PTHR11364] THIOSULFATE SULFERTANSFERASE109.170.4903
37 Mapoly0005s0148 [PTHR21250:SF0] SUBFAMILY NOT NAMED; [KOG4032] Uncharacterized conserved protein; [PTHR21250] UNCHARACTERIZED; [PF10273] Pre-rRNA-processing protein TSR2109.950.4776
38 Mapoly0028s0038 [PF04832] SOUL heme-binding protein; [PTHR11220] HEME-BINDING PROTEIN-RELATED111.800.5566
39 Mapoly0013s0185 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [PF01636] Phosphotransferase enzyme family115.380.4587
40 Mapoly0071s0061 [PTHR12354] INTERFERON-RELATED DEVELOPMENTAL REGULATOR; [PTHR12354:SF1] INTERFERON-RELATED DEVELOPMENTAL REGULATOR FAMILY PROTEIN; [PF04836] Interferon-related protein conserved region; [KOG2842] Interferon-related protein PC4 like; [PF05004] Interferon-related developmental regulator (IFRD)119.500.4730
41 Mapoly0152s0012 [PTHR10196] SUGAR KINASE; [PF02782] FGGY family of carbohydrate kinases, C-terminal domain; [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [2.7.1.17] Xylulokinase.; [GO:0005975] carbohydrate metabolic process; [PF00370] FGGY family of carbohydrate kinases, N-terminal domain; [K00854] xylulokinase [EC:2.7.1.17]; [KOG2531] Sugar (pentulose and hexulose) kinases120.890.4681
42 Mapoly0004s0045 -123.760.5280
43 Mapoly0041s0052 [KOG2743] Cobalamin synthesis protein; [PF07683] Cobalamin synthesis protein cobW C-terminal domain; [PTHR13748] COBW-RELATED; [PF02492] CobW/HypB/UreG, nucleotide-binding domain124.090.4710
44 Mapoly0082s0037 [KOG2547] Ceramide glucosyltransferase; [PF13506] Glycosyl transferase family 21; [PTHR12726:SF0] SUBFAMILY NOT NAMED; [PTHR12726] CERAMIDE GLUCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups124.700.5128
45 Mapoly0037s0036 [GO:0005524] ATP binding; [PTHR23077:SF9] PEROXISOME ASSEMBLY FACTOR-2 (PEROXISOMAL-TYPE ATPASE 1); [KOG0736] Peroxisome assembly factor 2 containing the AAA+-type ATPase domain; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [K13339] peroxin-6126.550.4932
46 Mapoly0013s0199 [K03542] photosystem II 22kDa protein; [PF00504] Chlorophyll A-B binding protein127.010.5772
47 Mapoly0014s0022 [PTHR10984] ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN; [PF13850] Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); [KOG2667] COPII vesicle protein; [PF07970] Endoplasmic reticulum vesicle transporter; [PTHR10984:SF25] SUBFAMILY NOT NAMED128.060.5317
48 Mapoly0099s0031 [PTHR12742] RNA-BINDING PROTEIN; [KOG1457] RNA binding protein (contains RRM repeats); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)129.200.5433
49 Mapoly0007s0255 [KOG2099] Glycogen phosphorylase; [2.4.1.1] Glycogen phosphorylase.; [PTHR11468:SF4] MALTODEXTRIN PHOSPHORYLASE; [GO:0005975] carbohydrate metabolic process; [K00688] starch phosphorylase [EC:2.4.1.1]; [PF00343] Carbohydrate phosphorylase; [PTHR11468] GLYCOGEN PHOSPHORYLASE; [GO:0008184] glycogen phosphorylase activity130.040.5053
50 Mapoly0022s0099 [KOG0266] WD40 repeat-containing protein; [PTHR19847:SF7] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [K11801] WD repeat-containing protein 23; [PTHR19847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat131.590.5103
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