Guide Gene

Gene ID
Mapoly0019s0057
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003676] nucleic acid binding; [PTHR24622] FAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0019s0057 [GO:0003676] nucleic acid binding; [PTHR24622] FAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000
1 Mapoly0001s0123 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain4.690.6703
2 Mapoly0007s0187 [KOG1603] Copper chaperone; [GO:0030001] metal ion transport; [PTHR22814] COPPER TRANSPORT PROTEIN ATOX1-RELATED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding4.900.7510
3 Mapoly0024s0120 [PTHR10042] EARLY GROWTH RESPONSE PROTEIN-RELATED5.480.7138
4 Mapoly0001s0066 [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein; [PTHR12770] FAMILY NOT NAMED9.380.7343
5 Mapoly0124s0065 [PTHR31963] FAMILY NOT NAMED; [PF12056] Protein of unknown function (DUF3537)9.900.6790
6 Mapoly0049s0082 [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [K00016] L-lactate dehydrogenase [EC:1.1.1.27]; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [PTHR11540:SF8] LACTATE DEHYDROGENASE; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [1.1.1.27] L-lactate dehydrogenase.; [PTHR11540] MALATE AND LACTATE DEHYDROGENASE; [GO:0044262] cellular carbohydrate metabolic process; [KOG1495] Lactate dehydrogenase9.950.6927
7 Mapoly0020s0073 [PF05602] Cleft lip and palate transmembrane protein 1 (CLPTM1); [PTHR21347] CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED; [KOG2489] Transmembrane protein; [PTHR21347:SF0] SUBFAMILY NOT NAMED12.650.7185
8 Mapoly0003s0160 [PTHR13608:SF3] SUBFAMILY NOT NAMED; [PTHR13608] UNCHARACTERIZED13.190.7392
9 Mapoly0010s0027 [PTHR23359] NUCLEOTIDE KINASE; [GO:0005524] ATP binding; [K00939] adenylate kinase [EC:2.7.4.3]; [GO:0019205] nucleobase-containing compound kinase activity; [KOG3078] Adenylate kinase; [GO:0006139] nucleobase-containing compound metabolic process; [PF00406] Adenylate kinase; [2.7.4.3] Adenylate kinase.13.960.6780
10 Mapoly0021s0092 [K01456] peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase [EC:3.5.1.52]; [PTHR12143] PEPTIDE N-GLYCANASE (PNGASE)-RELATED; [PF01841] Transglutaminase-like superfamily; [3.5.1.52] Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.14.700.6655
11 Mapoly0014s0129 [GO:0016021] integral to membrane; [GO:0006813] potassium ion transport; [GO:0005242] inward rectifier potassium channel activity; [PF01007] Inward rectifier potassium channel; [PTHR11767] INWARD RECTIFIER POTASSIUM CHANNEL15.870.7105
12 Mapoly0002s0232 [KOG1385] Nucleoside phosphatase; [GO:0016787] hydrolase activity; [PTHR11782] ADENOSINE/GUANOSINE DIPHOSPHATASE; [K14641] apyrase [EC:3.6.1.5]; [3.6.1.5] Apyrase.; [PF01150] GDA1/CD39 (nucleoside phosphatase) family16.910.7402
13 Mapoly0094s0054 [PTHR13923] SEC31-RELATED PROTEIN17.860.6860
14 Mapoly0076s0037 [PF06101] Plant protein of unknown function (DUF946); [PF09333] ATG C terminal domain; [PF06650] Protein of unknown function (DUF1162); [PTHR16166] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN (VPS13); [PTHR16166:SF61] PUTATIVE UNCHARACTERIZED PROTEIN20.710.6791
15 Mapoly0029s0015 [GO:0003677] DNA binding; [PF00046] Homeobox domain; [PTHR24326] FAMILY NOT NAMED21.170.6778
16 Mapoly0041s0037 [GO:0008060] ARF GTPase activator activity; [K12486] stromal membrane-associated protein; [PTHR23180] CENTAURIN/ARF; [GO:0008270] zinc ion binding; [KOG0702] Predicted GTPase-activating protein; [GO:0032312] regulation of ARF GTPase activity; [PF01412] Putative GTPase activating protein for Arf23.040.6298
17 Mapoly0013s0080 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE28.500.6649
18 Mapoly0006s0222 [GO:0005524] ATP binding; [GO:0032300] mismatch repair complex; [KOG1977] DNA mismatch repair protein - MLH3 family; [PTHR10073:SF7] DNA MISMATCH REPAIR PROTEIN MLH3; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0007131] reciprocal meiotic recombination; [PTHR10073] DNA MISMATCH REPAIR PROTEIN (MLH, PMS, MUTL); [GO:0006298] mismatch repair; [PF08676] MutL C terminal dimerisation domain; [GO:0030983] mismatched DNA binding; [PF01119] DNA mismatch repair protein, C-terminal domain; [K08739] DNA mismatch repair protein MLH331.460.6891
19 Mapoly0013s0177 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [K07942] ADP-ribosylation factor-like 1; [PF00025] ADP-ribosylation factor family; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding32.760.6562
20 Mapoly0014s0056 [PF07085] DRTGG domain; [PTHR23406] MALIC ENZYME-RELATED; [PF13500] AAA domain; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [PTHR23406:SF3] PHOSPHATE ACETYLTRANSFERASE; [PF01515] Phosphate acetyl/butaryl transferase32.790.6495
21 Mapoly0088s0022 [PF03168] Late embryogenesis abundant protein; [PTHR31852] FAMILY NOT NAMED35.750.6213
22 Mapoly0009s0237 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24349] SERINE/THREONINE-PROTEIN KINASE; [GO:0006468] protein phosphorylation; [KOG0032] Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily39.040.6857
23 Mapoly0150s0019 [KOG2816] Predicted transporter ADD1 (major facilitator superfamily); [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily39.150.6707
24 Mapoly0154s0016 [PF03798] TLC domain; [KOG1607] Protein transporter of the TRAM (translocating chain-associating membrane) superfamily; [PTHR12560:SF5] gb def: lagl protein [suberites domuncula]; [GO:0016021] integral to membrane; [PTHR12560] LONGEVITY ASSURANCE FACTOR 1 (LAG1)39.420.6502
25 Mapoly0189s0021 [PTHR10782] ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [PF02891] MIZ/SP-RING zinc finger40.990.6619
26 Mapoly0076s0039 [PF00096] Zinc finger, C2H2 type; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [GO:0046872] metal ion binding42.710.6414
27 Mapoly0060s0023 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain42.730.6107
28 Mapoly0144s0012 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain43.910.7063
29 Mapoly0004s0241 -45.170.6715
30 Mapoly0052s0101 -45.910.6615
31 Mapoly0116s0051 [PTHR19282] TETRASPANIN; [PF00335] Tetraspanin family; [GO:0016021] integral to membrane48.060.6610
32 Mapoly0051s0005 [PF00571] CBS domain; [KOG1764] 5'-AMP-activated protein kinase, gamma subunit; [PTHR13780] AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT; [GO:0030554] adenyl nucleotide binding50.300.5953
33 Mapoly0005s0201 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0005515] protein binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR12348] TSC22; [PF00498] FHA domain54.330.6737
34 Mapoly0026s0039 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR22952] CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED; [K14431] transcription factor TGA; [GO:0006351] transcription, DNA-dependent; [PF00170] bZIP transcription factor; [PF14144] Seed dormancy control54.390.6305
35 Mapoly0226s0004 [PTHR23316:SF1] gb def: Importin alpha-1 subunit (Karyopherin alpha-1 subunit); [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [PTHR23316] IMPORTIN ALPHA55.210.5889
36 Mapoly0037s0071 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0835] Cyclin L; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PTHR10026:SF13] CYCLIN-L1-RELATED; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity57.130.6674
37 Mapoly0065s0020 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [PF08323] Starch synthase catalytic domain; [PTHR12526] GLYCOSYLTRANSFERASE57.500.6730
38 Mapoly0160s0016 -57.580.6100
39 Mapoly0003s0271 [PTHR31636] FAMILY NOT NAMED; [PF03514] GRAS domain family60.430.5718
40 Mapoly0158s0019 [PTHR24012] FAMILY NOT NAMED; [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)61.040.6702
41 Mapoly0106s0019 [K06689] ubiquitin-conjugating enzyme E2 D/E [EC:6.3.2.19]; [GO:0016881] acid-amino acid ligase activity; [PTHR24068] FAMILY NOT NAMED; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme61.710.6604
42 Mapoly0058s0114 [PF02431] Chalcone-flavanone isomerase; [GO:0016872] intramolecular lyase activity62.570.6094
43 Mapoly0119s0044 [GO:0016021] integral to membrane; [KOG1278] Endosomal membrane proteins, EMP70; [PF02990] Endomembrane protein 70; [PTHR10766] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN62.800.6646
44 Mapoly0035s0029 [PF10602] 26S proteasome subunit RPN7; [KOG0686] COP9 signalosome, subunit CSN1; [GO:0005515] protein binding; [PTHR14145] 26S PROTESOME SUBUNIT 6; [PTHR14145:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 1; [PF01399] PCI domain; [K12175] COP9 signalosome complex subunit 163.690.6659
45 Mapoly0011s0108 -65.670.6035
46 Mapoly0016s0073 [PTHR13723] ADAMTS (A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS) PROTEASE65.840.6743
47 Mapoly0033s0128 [PF03134] TB2/DP1, HVA22 family; [PTHR12300] HVA22-LIKE PROTEINS; [PTHR12300:SF22] SUBFAMILY NOT NAMED65.880.6588
48 Mapoly0014s0224 [GO:0003677] DNA binding; [PTHR31251] FAMILY NOT NAMED; [GO:0005634] nucleus; [PF03110] SBP domain69.970.6611
49 Mapoly0011s0005 [PF01602] Adaptin N terminal region; [PTHR22780] ADAPTIN, ALPHA/GAMMA/EPSILON; [GO:0016192] vesicle-mediated transport; [K12400] AP-4 complex subunit epsilon-1; [KOG1062] Vesicle coat complex AP-1, gamma subunit; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [PTHR22780:SF13] SUBFAMILY NOT NAMED71.830.5910
50 Mapoly0140s0004 [GO:0016020] membrane; [PF09177] Syntaxin 6, N-terminal; [KOG3202] SNARE protein TLG1/Syntaxin 6; [GO:0048193] Golgi vesicle transport; [GO:0005515] protein binding; [PTHR12380] SYNTAXIN; [PF05739] SNARE domain71.850.6083
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