Guide Gene

Gene ID
Mapoly0096s0060
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF15613] WSTF, HB1, Itc1p, MBD9 motif 2; [PTHR15546] FAMILY NOT NAMED; [PF10537] ATP-utilising chromatin assembly and remodelling N-terminal; [PF02791] DDT domain

Coexpressed Gene Network

Gene ID Description Information
Mapoly0001s0017 [PTHR11618:SF4] TRANSCRIPTION FACTOR IIIB; [GO:0006355] regulation of transcription, DNA-dependent; [PF00382] Transcription factor TFIIB repeat; [GO:0006352] DNA-dependent transcription, initiation; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0000126] transcription factor TFIIIB complex; [PF07741] Brf1-like TBP-binding domain; [GO:0008270] zinc ion binding; [GO:0017025] TBP-class protein binding; [GO:0006384] transcription initiation from RNA polymerase III promoter; [KOG1598] Transcription initiation factor TFIIIB, Brf1 subunit
Mapoly0004s0049 [PF13414] TPR repeat; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [KOG0550] Molecular chaperone (DnaJ superfamily)
Mapoly0011s0138 [PF12717] non-SMC mitotic condensation complex subunit 1; [K13141] integrator complex subunit 4; [PTHR20938] UNCHARACTERIZED; [PTHR20938:SF0] SUBFAMILY NOT NAMED
Mapoly0011s0206 [GO:0005524] ATP binding; [PTHR24031:SF125] SUBFAMILY NOT NAMED; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0339] ATP-dependent RNA helicase; [K12835] ATP-dependent RNA helicase DDX42 [EC:3.6.4.13]; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding
Mapoly0013s0152 [PTHR12436:SF4] LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER 8; [KOG1861] Leucine permease transcriptional regulator; [PTHR12436] 80 KDA MCM3-ASSOCIATED PROTEIN; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family
Mapoly0014s0099 [PTHR22100] FAMILY NOT NAMED; [PF07814] Wings apart-like protein regulation of heterochromatin
Mapoly0016s0037 -
Mapoly0027s0115 [PF12656] DExH-box splicing factor binding site; [PTHR15818] G PATCH AND KOW-CONTAINING; [PTHR15818:SF2] SUBFAMILY NOT NAMED; [K13101] G patch domain and KOW motifs-containing protein
Mapoly0030s0052 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR11909] CASEIN KINASE-RELATED; [KOG1164] Casein kinase (serine/threonine/tyrosine protein kinase)
Mapoly0035s0133 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PF00097] Zinc finger, C3HC4 type (RING finger); [PTHR23163:SF0] SUBFAMILY NOT NAMED; [6.3.2.19] Ubiquitin--protein ligase.; [K10696] E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19]; [GO:0046872] metal ion binding; [PTHR23163] RING FINGER PROTEIN-RELATED
Mapoly0037s0064 [PTHR23231] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PTHR23231:SF4] SUBFAMILY NOT NAMED
Mapoly0055s0059 [GO:0000124] SAGA complex; [GO:0003712] transcription cofactor activity; [PF12090] Spt20 family; [PTHR13526] P38 INTERACTING PROTEIN
Mapoly0068s0063 -
Mapoly0074s0050 [GO:0005524] ATP binding; [K12815] pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]; [GO:0004386] helicase activity; [KOG0924] mRNA splicing factor ATP-dependent RNA helicase; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold
Mapoly0091s0046 [PF05641] Agenet domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR24098] FAMILY NOT NAMED
Mapoly0096s0060 [PF15613] WSTF, HB1, Itc1p, MBD9 motif 2; [PTHR15546] FAMILY NOT NAMED; [PF10537] ATP-utilising chromatin assembly and remodelling N-terminal; [PF02791] DDT domain
Mapoly0103s0072 [KOG1901] Uncharacterized high-glucose-regulated protein; [PTHR12357] YTH (YT521-B HOMOLOGY) DOMAIN-CONTAINING; [PF04146] YT521-B-like domain
Mapoly0105s0061 [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Mapoly0167s0020 [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PF02919] Eukaryotic DNA topoisomerase I, DNA binding fragment; [KOG0981] DNA topoisomerase I; [GO:0006265] DNA topological change; [PF01028] Eukaryotic DNA topoisomerase I, catalytic core; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [GO:0005694] chromosome; [PTHR10290] DNA TOPOISOMERASE I; [PF14370] C-terminal topoisomerase domain; [K03163] DNA topoisomerase I [EC:5.99.1.2]; [5.99.1.2] DNA topoisomerase.
Mapoly0177s0019 [KOG0149] Predicted RNA-binding protein SEB4 (RRM superfamily); [PF01480] PWI domain; [PTHR23365] POLY-A BINDING PROTEIN 2; [GO:0006397] mRNA processing; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Mapoly0187s0019 [PF00855] PWWP domain; [PF12243] CTD kinase subunit gamma CTK3; [PTHR12550] HEPATOMA-DERIVED GROWTH FACTOR-RELATED; [KOG2669] Regulator of nuclear mRNA