Guide Gene
- Gene ID
- Mapoly0074s0050
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0005524] ATP binding; [K12815] pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]; [GO:0004386] helicase activity; [KOG0924] mRNA splicing factor ATP-dependent RNA helicase; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold
Coexpressed Gene List
Search : Show :Showing 1 to 50 of 200 records
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0074s0050 [GO:0005524] ATP binding; [K12815] pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]; [GO:0004386] helicase activity; [KOG0924] mRNA splicing factor ATP-dependent RNA helicase; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold 0.00 1.0000 1 Mapoly0035s0133 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PF00097] Zinc finger, C3HC4 type (RING finger); [PTHR23163:SF0] SUBFAMILY NOT NAMED; [6.3.2.19] Ubiquitin--protein ligase.; [K10696] E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19]; [GO:0046872] metal ion binding; [PTHR23163] RING FINGER PROTEIN-RELATED 1.41 0.8967 2 Mapoly0177s0019 [KOG0149] Predicted RNA-binding protein SEB4 (RRM superfamily); [PF01480] PWI domain; [PTHR23365] POLY-A BINDING PROTEIN 2; [GO:0006397] mRNA processing; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3.46 0.8948 3 Mapoly0007s0209 [PF15275] PEHE domain; [GO:0005515] protein binding; [PF00439] Bromodomain; [PTHR22881] BROMODOMAIN CONTAINING PROTEIN 4.24 0.8923 4 Mapoly0085s0079 [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR 4.24 0.8834 5 Mapoly0075s0060 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR15725] ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING; [GO:0046872] metal ion binding 4.47 0.8841 6 Mapoly0078s0024 [PTHR14398] RNA RECOGNITION RRM/RNP DOMAIN; [PTHR14398:SF0] SUBFAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) 4.90 0.8915 7 Mapoly0060s0059 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR16557:SF4] gb def: Alkylated DNA repair protein alkB; [PTHR16557] ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED; [GO:0008270] zinc ion binding; [GO:0005634] nucleus; [KOG2845] Activating signal cointegrator 1; [PF06221] Putative zinc finger motif, C2HC5-type; [PF13532] 2OG-Fe(II) oxygenase superfamily 5.39 0.8410 8 Mapoly0202s0013 [PF12937] F-box-like; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG4341] F-box protein containing LRR 8.37 0.8825 9 Mapoly0004s0049 [PF13414] TPR repeat; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [KOG0550] Molecular chaperone (DnaJ superfamily) 10.58 0.8786 10 Mapoly0001s0487 [PTHR16216:SF2] SUBFAMILY NOT NAMED; [PTHR16216] FAMILY NOT NAMED 13.04 0.8639 11 Mapoly0049s0034 - 13.78 0.8584 12 Mapoly0013s0152 [PTHR12436:SF4] LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER 8; [KOG1861] Leucine permease transcriptional regulator; [PTHR12436] 80 KDA MCM3-ASSOCIATED PROTEIN; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family 15.00 0.8767 13 Mapoly0011s0206 [GO:0005524] ATP binding; [PTHR24031:SF125] SUBFAMILY NOT NAMED; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0339] ATP-dependent RNA helicase; [K12835] ATP-dependent RNA helicase DDX42 [EC:3.6.4.13]; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 15.30 0.8650 14 Mapoly0211s0012 - 15.56 0.8691 15 Mapoly0096s0060 [PF15613] WSTF, HB1, Itc1p, MBD9 motif 2; [PTHR15546] FAMILY NOT NAMED; [PF10537] ATP-utilising chromatin assembly and remodelling N-terminal; [PF02791] DDT domain 15.97 0.8643 16 Mapoly0047s0022 [PF00782] Dual specificity phosphatase, catalytic domain; [K01104] protein-tyrosine phosphatase [EC:3.1.3.48]; [GO:0006470] protein dephosphorylation; [PTHR23339] TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [3.1.3.48] Protein-tyrosine-phosphatase.; [PTHR23339:SF25] DUAL SPECIFICITY PROTEIN PHOSPHATASE 18.00 0.8318 17 Mapoly0007s0068 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PF02984] Cyclin, C-terminal domain; [GO:0005634] nucleus; [KOG0834] CDK9 kinase-activating protein cyclin T; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity 19.44 0.8648 18 Mapoly0091s0046 [PF05641] Agenet domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR24098] FAMILY NOT NAMED 19.75 0.8748 19 Mapoly0005s0175 [GO:0005515] protein binding; [KOG0293] WD40 repeat-containing protein; [PTHR22838] WD REPEAT PROTEIN 26-RELATED; [PF00400] WD domain, G-beta repeat; [PTHR22838:SF0] SUBFAMILY NOT NAMED 19.90 0.7899 20 Mapoly0030s0052 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR11909] CASEIN KINASE-RELATED; [KOG1164] Casein kinase (serine/threonine/tyrosine protein kinase) 20.40 0.8642 21 Mapoly0095s0042 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PTHR24362] SERINE/THREONINE-PROTEIN KINASE NEK; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation 20.49 0.7966 22 Mapoly0023s0039 [PF00676] Dehydrogenase E1 component; [GO:0055114] oxidation-reduction process; [GO:0006099] tricarboxylic acid cycle; [1.2.4.2] Oxoglutarate dehydrogenase (succinyl-transferring).; [GO:0030976] thiamine pyrophosphate binding; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [K00164] 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]; [GO:0004591] oxoglutarate dehydrogenase (succinyl-transferring) activity; [PTHR23152] 2-OXOGLUTARATE DEHYDROGENASE; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; [KOG0450] 2-oxoglutarate dehydrogenase, E1 subunit 20.98 0.7957 23 Mapoly0077s0055 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [K11665] DNA helicase INO80 [EC:3.6.4.12]; [PTHR10799:SF213] DNA HELICASE INO80-RELATED; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [PF13892] DNA-binding domain; [KOG0388] SNF2 family DNA-dependent ATPase 21.07 0.8671 24 Mapoly0096s0028 [PTHR21683:SF3] SUBFAMILY NOT NAMED; [PTHR21683] UNCHARACTERIZED; [PF13863] Domain of unknown function (DUF4200) 21.49 0.8048 25 Mapoly0037s0064 [PTHR23231] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PTHR23231:SF4] SUBFAMILY NOT NAMED 22.25 0.8179 26 Mapoly0013s0146 [PTHR11772] ASPARAGINE SYNTHETASE; [PTHR11772:SF3] ASPARAGINE SYNTHETASE; [GO:0008152] metabolic process; [GO:0006529] asparagine biosynthetic process; [KOG0573] Asparagine synthase; [PF00733] Asparagine synthase; [PF13537] Glutamine amidotransferase domain; [GO:0004066] asparagine synthase (glutamine-hydrolyzing) activity 22.45 0.8065 27 Mapoly0151s0018 [PF00917] MATH domain; [GO:0005515] protein binding; [PTHR24006] FAMILY NOT NAMED 22.80 0.8579 28 Mapoly0035s0058 - 23.30 0.7549 29 Mapoly0028s0019 [K07359] calcium/calmodulin-dependent protein kinase kinase [EC:2.7.11.17]; [GO:0005524] ATP binding; [PTHR24347] SERINE/THREONINE-PROTEIN KINASE; [PF00069] Protein kinase domain; [PTHR24347:SF1] CALCIUM/CALMODULIN DEPENDENT PROTEIN KINASE KINASE 1; [2.7.11.17] Calcium/calmodulin-dependent protein kinase.; [GO:0004672] protein kinase activity; [KOG0616] cAMP-dependent protein kinase catalytic subunit (PKA); [GO:0006468] protein phosphorylation 23.49 0.8032 30 Mapoly0062s0029 [KOG1982] Nuclear 5'-3' exoribonuclease-interacting protein, Rai1p; [PF08652] RAI1 like PD-(D/E)XK nuclease; [PTHR12395:SF9] SUBFAMILY NOT NAMED; [PTHR12395] DOM-3 RELATED 23.98 0.8467 31 Mapoly0019s0132 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0006468] protein phosphorylation; [GO:0003824] catalytic activity; [KOG0594] Protein kinase PCTAIRE and related kinases 24.00 0.8161 32 Mapoly0011s0138 [PF12717] non-SMC mitotic condensation complex subunit 1; [K13141] integrator complex subunit 4; [PTHR20938] UNCHARACTERIZED; [PTHR20938:SF0] SUBFAMILY NOT NAMED 24.37 0.8605 33 Mapoly0079s0052 [PF00249] Myb-like DNA-binding domain; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PF04433] SWIRM domain; [KOG1279] Chromatin remodeling factor subunit and related transcription factors; [PTHR12802] SWI/SNF COMPLEX-RELATED; [K11649] SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C 24.66 0.8364 34 Mapoly0059s0093 [PTHR10994] RETICULON; [PF03407] Nucleotide-diphospho-sugar transferase 24.70 0.7763 35 Mapoly0066s0029 [PTHR12707] PINN; [K13114] pinin; [KOG3756] Pinin (desmosome-associated protein); [PF04696] pinin/SDK/memA/ protein conserved region 25.04 0.8360 36 Mapoly0085s0091 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE 25.10 0.8402 37 Mapoly0060s0062 [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR10782] ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [PF02891] MIZ/SP-RING zinc finger; [GO:0003676] nucleic acid binding; [PF02037] SAP domain 26.32 0.8536 38 Mapoly0007s0033 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN 26.83 0.8008 39 Mapoly0167s0020 [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PF02919] Eukaryotic DNA topoisomerase I, DNA binding fragment; [KOG0981] DNA topoisomerase I; [GO:0006265] DNA topological change; [PF01028] Eukaryotic DNA topoisomerase I, catalytic core; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [GO:0005694] chromosome; [PTHR10290] DNA TOPOISOMERASE I; [PF14370] C-terminal topoisomerase domain; [K03163] DNA topoisomerase I [EC:5.99.1.2]; [5.99.1.2] DNA topoisomerase. 27.00 0.8444 40 Mapoly0052s0017 - 27.22 0.8093 41 Mapoly0006s0271 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [K12823] ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 27.28 0.8066 42 Mapoly0044s0042 [GO:0008270] zinc ion binding; [PF07967] C3HC zinc finger-like; [GO:0005634] nucleus; [PTHR15835] FAMILY NOT NAMED 28.00 0.7802 43 Mapoly0014s0099 [PTHR22100] FAMILY NOT NAMED; [PF07814] Wings apart-like protein regulation of heterochromatin 28.14 0.8522 44 Mapoly0168s0008 [PTHR24011:SF139] SUBFAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28.37 0.8320 45 Mapoly0055s0059 [GO:0000124] SAGA complex; [GO:0003712] transcription cofactor activity; [PF12090] Spt20 family; [PTHR13526] P38 INTERACTING PROTEIN 28.77 0.8475 46 Mapoly0086s0009 [GO:0070461] SAGA-type complex; [PTHR21277] FAMILY NOT NAMED; [PF12767] Transcriptional regulator of RNA polII, SAGA, subunit 29.17 0.8312 47 Mapoly0007s0211 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0031011] Ino80 complex; [KOG0681] Actin-related protein - Arp5p; [PF00022] Actin; [GO:0006281] DNA repair; [PTHR11937:SF16] ACTIN-RELATED PROTEIN 5, ARP5; [K11672] actin-related protein 5; [PTHR11937] ACTIN 30.59 0.8128 48 Mapoly0176s0001 [PTHR13793] PHD FINGER PROTEINS; [PF10513] Enhancer of polycomb-like 30.59 0.8469 49 Mapoly0001s0482 [PF05764] YL1 nuclear protein; [KOG2897] DNA-binding protein YL1 and related proteins; [GO:0006355] regulation of transcription, DNA-dependent; [PF08265] YL1 nuclear protein C-terminal domain; [K11664] vacuolar protein sorting-associated protein 72; [GO:0005634] nucleus; [PTHR13275] YL-1 PROTEIN (TRANSCRIPTION FACTOR-LIKE 1) 30.98 0.8280 50 Mapoly0008s0063 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0005515] protein binding; [PF04433] SWIRM domain; [GO:0016491] oxidoreductase activity; [K11450] lysine-specific histone demethylase 1 [EC:1.-.-.-]; [KOG0029] Amine oxidase; [1.-.-.-] Oxidoreductases. 32.12 0.8211