Guide Gene

Gene ID
Mapoly0091s0053
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG0963] Transcription factor/CCAAT displacement protein CDP1; [PTHR14043] CCAAT DISPLACEMENT PROTEIN-RELATED; [K09313] homeobox protein cut-like; [GO:0006891] intra-Golgi vesicle-mediated transport; [GO:0030173] integral to Golgi membrane; [PF08172] CASP C terminal

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0091s0053 [KOG0963] Transcription factor/CCAAT displacement protein CDP1; [PTHR14043] CCAAT DISPLACEMENT PROTEIN-RELATED; [K09313] homeobox protein cut-like; [GO:0006891] intra-Golgi vesicle-mediated transport; [GO:0030173] integral to Golgi membrane; [PF08172] CASP C terminal 0.00 1.0000
1 Mapoly0010s0002 [GO:0016020] membrane; [KOG2431] 1, 2-alpha-mannosidase; [K01230] mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]; [PTHR11742:SF7] ENDOPLASMIC RETICULUM MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0005509] calcium ion binding; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [PF01532] Glycosyl hydrolase family 47; [3.2.1.113] Mannosyl-oligosaccharide 1,2-alpha-mannosidase.3.160.7349
2 Mapoly0144s0028 [GO:0016020] membrane; [PTHR11384] ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER; [GO:0005524] ATP binding; [KOG0060] Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [PF06472] ABC transporter transmembrane region 2; [GO:0016887] ATPase activity; [GO:0006810] transport; [PF00005] ABC transporter4.120.7644
3 Mapoly0122s0048 -4.240.6903
4 Mapoly0060s0008 [PF07748] Glycosyl hydrolases family 38 C-terminal domain; [GO:0015923] mannosidase activity; [PTHR11607] ALPHA-MANNOSIDASE; [GO:0004559] alpha-mannosidase activity; [GO:0006013] mannose metabolic process; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [PF09261] Alpha mannosidase, middle domain; [GO:0005975] carbohydrate metabolic process; [GO:0008270] zinc ion binding; [K01231] alpha-mannosidase II [EC:3.2.1.114]; [PF01074] Glycosyl hydrolases family 38 N-terminal domain; [PTHR11607:SF4] MANNOSIDASE ALPHA CLASS 2A; [3.2.1.114] Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase.; [KOG1958] Glycosyl hydrolase, family 38 - alpha-mannosidase5.100.7630
5 Mapoly0104s0033 [GO:0005524] ATP binding; [3.6.4.6] Vesicle-fusing ATPase.; [PF02359] Cell division protein 48 (CDC48), N-terminal domain; [PF02933] Cell division protein 48 (CDC48), domain 2; [K06027] vesicle-fusing ATPase [EC:3.6.4.6]; [PF00004] ATPase family associated with various cellular activities (AAA); [KOG0741] AAA+-type ATPase; [PTHR23078] VESICULAR-FUSION PROTEIN NSF; [PTHR23078:SF3] VESICULAR-FUSION PROTEIN NSF12.040.6717
6 Mapoly0143s0007 [PF08314] Secretory pathway protein Sec39; [PTHR15922:SF2] SUBFAMILY NOT NAMED; [PTHR15922] FAMILY NOT NAMED12.730.7414
7 Mapoly0004s0054 [KOG0379] Kelch repeat-containing proteins; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain; [GO:0005515] protein binding; [PF07646] Kelch motif; [PF00887] Acyl CoA binding protein; [GO:0000062] fatty-acyl-CoA binding14.390.6827
8 Mapoly0009s0087 [PTHR24011:SF38] SUBFAMILY NOT NAMED; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0117] Heterogeneous nuclear ribonucleoprotein R (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)16.790.7282
9 Mapoly0029s0003 [KOG1824] TATA-binding protein-interacting protein; [PTHR12696] TIP120; [PF08623] TATA-binding protein interacting (TIP20); [PF13646] HEAT repeats20.690.7405
10 Mapoly0001s0364 [PTHR23322] FAS-ASSOCIATED PROTEIN; [PF02809] Ubiquitin interaction motif; [GO:0005515] protein binding; [PF00789] UBX domain; [PTHR23322:SF3] ARA4-INTERACTING PROTEIN21.350.6592
11 Mapoly0065s0073 [KOG0010] Ubiquitin-like protein; [PTHR10677:SF3] UBIQUITIN FAMILY PROTEIN; [GO:0005515] protein binding; [PTHR10677] UBIQUILIN; [PF00627] UBA/TS-N domain; [PF00240] Ubiquitin family; [K04523] ubiquilin21.680.6164
12 Mapoly0006s0086 [GO:0016021] integral to membrane; [PF02990] Endomembrane protein 70; [KOG1277] Endosomal membrane proteins, EMP70; [PTHR10766] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN; [PTHR10766:SF14] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN MEMBER 121.820.6970
13 Mapoly0016s0179 [3.1.3.67] Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase.; [K01110] phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase [EC:3.1.3.67]; [KOG2283] Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases; [PF10409] C2 domain of PTEN tumour-suppressor protein; [PTHR12305] PHOSPHATASE WITH HOMOLOGY TO TENSIN24.170.6318
14 Mapoly0026s0079 -24.250.7056
15 Mapoly0105s0015 [GO:0003677] DNA binding; [KOG2393] Transcription initiation factor IIF, large subunit (RAP74); [GO:0032968] positive regulation of transcription elongation from RNA polymerase II promoter; [K03138] transcription initiation factor TFIIF subunit alpha; [PF05793] Transcription initiation factor IIF, alpha subunit (TFIIF-alpha); [PTHR13011] TFIIF-ALPHA; [GO:0005634] nucleus; [GO:0006367] transcription initiation from RNA polymerase II promoter24.390.7108
16 Mapoly0082s0054 [PF10358] N-terminal C2 in EEIG1 and EHBP1 proteins; [PTHR31593] FAMILY NOT NAMED; [PTHR31593:SF0] SUBFAMILY NOT NAMED24.490.6816
17 Mapoly0096s0071 -26.320.7081
18 Mapoly0028s0103 [PF01713] Smr domain; [GO:0003677] DNA binding; [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [K07456] DNA mismatch repair protein MutS2; [GO:0016887] ATPase activity; [PTHR11361:SF14] DNA MISMATCH REPAIR PROTEIN MUTS2; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [GO:0045910] negative regulation of DNA recombination27.460.6432
19 Mapoly0012s0104 [GO:0031625] ubiquitin protein ligase binding; [GO:0031461] cullin-RING ubiquitin ligase complex; [KOG2166] Cullins; [GO:0006511] ubiquitin-dependent protein catabolic process; [PF10557] Cullin protein neddylation domain; [PTHR11932] CULLIN; [PF00888] Cullin family27.550.6693
20 Mapoly0014s0204 [PTHR24012] FAMILY NOT NAMED; [PTHR24012:SF31] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG0148] Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily)28.280.7094
21 Mapoly0109s0022 [GO:0016020] membrane; [PTHR13302] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3; [GO:0005801] cis-Golgi network; [GO:0006886] intracellular protein transport; [KOG2604] Subunit of cis-Golgi transport vesicle tethering complex - Sec34p; [PF04136] Sec34-like family29.120.6986
22 Mapoly0114s0016 [GO:0005783] endoplasmic reticulum; [KOG0675] Calnexin; [PTHR11073] CALRETICULIN AND CALNEXIN; [K08054] calnexin; [PF00262] Calreticulin family; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [GO:0005509] calcium ion binding; [PTHR11073:SF1] CALNEXIN29.290.6368
23 Mapoly0059s0096 [PF05250] Uncharacterised protein family (UPF0193)29.730.6662
24 Mapoly0011s0201 [GO:0031625] ubiquitin protein ligase binding; [GO:0031461] cullin-RING ubiquitin ligase complex; [KOG2166] Cullins; [GO:0006511] ubiquitin-dependent protein catabolic process; [PF10557] Cullin protein neddylation domain; [K03869] cullin 3; [PTHR11932] CULLIN; [PF00888] Cullin family32.450.6743
25 Mapoly0009s0042 [KOG1985] Vesicle coat complex COPII, subunit SEC24/subunit SFB2; [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [PTHR13803:SF4] gb def: SED5-binding protein 3 (SEC24-related protein 3) (Lethal with SEC13 protein 1); [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [K14007] protein transport protein SEC24; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport33.260.7022
26 Mapoly0035s0147 [PTHR12085] PHOSPHATASE SUBUNIT GENE G4-1; [PTHR12085:SF3] PHOSPHATASE SUBUNIT GENE G4-1; [KOG2562] Protein phosphatase 2 regulatory subunit; [K11583] protein phosphatase 2 (formerly 2A), regulatory subunit B''; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding33.870.6710
27 Mapoly0114s0035 [PTHR31169] FAMILY NOT NAMED; [PF10497] Zinc-finger domain of monoamine-oxidase A repressor R135.370.7096
28 Mapoly0177s0007 [GO:0016020] membrane; [3.6.1.1] Inorganic diphosphatase.; [PF03030] Inorganic H+ pyrophosphatase; [GO:0004427] inorganic diphosphatase activity; [PTHR31998:SF0] SUBFAMILY NOT NAMED; [K01507] inorganic pyrophosphatase [EC:3.6.1.1]; [GO:0015992] proton transport; [GO:0009678] hydrogen-translocating pyrophosphatase activity; [PTHR31998] FAMILY NOT NAMED35.410.6827
29 Mapoly0177s0009 [KOG2641] Predicted seven transmembrane receptor - rhodopsin family; [PTHR23423] ORGANIC SOLUTE TRANSPORTER-RELATED; [PF03619] Organic solute transporter Ostalpha35.500.6207
30 Mapoly0019s0073 [GO:0008565] protein transporter activity; [PTHR23316:SF0] SUBFAMILY NOT NAMED; [PF01749] Importin beta binding domain; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005737] cytoplasm; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [GO:0005634] nucleus; [PTHR23316] IMPORTIN ALPHA; [GO:0006606] protein import into nucleus35.780.6706
31 Mapoly0013s0180 [PF12329] TATA element modulatory factor 1 DNA binding; [PTHR13140] MYOSIN; [KOG4673] Transcription factor TMF, TATA element modulatory factor; [PF12325] TATA element modulatory factor 1 TATA binding36.540.6993
32 Mapoly0021s0140 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [PTHR23054] UNCHARACTERIZED; [PF00610] Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); [GO:0035556] intracellular signal transduction; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [PF04784] Protein of unknown function, DUF54737.090.6566
33 Mapoly0021s0150 [PF00226] DnaJ domain37.300.6105
34 Mapoly0003s0208 [PF10381] Autophagocytosis associated protein C-terminal; [K08343] autophagy-related protein 3; [PTHR12866] AUTOPHAGOCYTOSIS PROTEIN AUT1-RELATED; [PF03986] Autophagocytosis associated protein (Atg3), N-terminal domain; [PF03987] Autophagocytosis associated protein, active-site domain; [KOG2981] Protein involved in autophagocytosis during starvation37.470.6286
35 Mapoly0061s0016 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [KOG1030] Predicted Ca2+-dependent phospholipid-binding protein; [PF00168] C2 domain; [GO:0005515] protein binding39.240.5667
36 Mapoly0007s0083 -39.500.6714
37 Mapoly0010s0073 [GO:0004518] nuclease activity; [PF04231] Endonuclease I42.110.5761
38 Mapoly0004s0169 [GO:0003677] DNA binding; [GO:0006338] chromatin remodeling; [GO:0005524] ATP binding; [PF09110] HAND; [K11654] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-]; [GO:0043044] ATP-dependent chromatin remodeling; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [GO:0005634] nucleus; [PTHR10799:SF73] ISWI CHROMATIN-REMODELING COMPLEX ATPASE ISW1; [PF00271] Helicase conserved C-terminal domain; [3.6.4.-] Acting on acid anhydrides; involved in cellular and subcellular movement.; [KOG0385] Chromatin remodeling complex WSTF-ISWI, small subunit; [GO:0003676] nucleic acid binding; [GO:0031491] nucleosome binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; [PF09111] SLIDE45.610.7097
39 Mapoly0043s0019 [PTHR18860:SF15] 14-3-3-RELATED; [K06630] tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein; [KOG0841] Multifunctional chaperone (14-3-3 family); [PF00244] 14-3-3 protein; [GO:0019904] protein domain specific binding; [PTHR18860] 14-3-3 PROTEIN46.580.6390
40 Mapoly0014s0121 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0390] DNA repair protein, SNF2 family; [PF00271] Helicase conserved C-terminal domain53.440.6829
41 Mapoly0016s0066 -53.530.5779
42 Mapoly0003s0020 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K09486] hypoxia up-regulated 1; [KOG0104] Molecular chaperones GRP170/SIL1, HSP70 superfamily; [PF00012] Hsp70 protein; [PTHR19375:SF90] HEAT SHOCK PROTEIN 7055.860.6121
43 Mapoly0004s0129 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [PF12436] ICP0-binding domain of Ubiquitin-specific protease 7; [PF00917] MATH domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005515] protein binding; [KOG1863] Ubiquitin carboxyl-terminal hydrolase; [PF14533] Ubiquitin-specific protease C-terminal; [PTHR24619] FAMILY NOT NAMED; [K11838] ubiquitin carboxyl-terminal hydrolase 7 [EC:3.1.2.15]57.910.7032
44 Mapoly0050s0099 [PF10433] Mono-functional DNA-alkylating methyl methanesulfonate N-term; [KOG1897] Damage-specific DNA binding complex, subunit DDB160.000.6793
45 Mapoly0034s0044 [PTHR11469:SF2] GLUCOSE-6-PHOSPHATE ISOMERASE; [K01810] glucose-6-phosphate isomerase [EC:5.3.1.9]; [KOG2446] Glucose-6-phosphate isomerase; [GO:0006096] glycolysis; [5.3.1.9] Glucose-6-phosphate isomerase.; [PF00342] Phosphoglucose isomerase; [GO:0004347] glucose-6-phosphate isomerase activity; [GO:0006094] gluconeogenesis; [PTHR11469] GLUCOSE-6-PHOSPHATE ISOMERASE60.150.5990
46 Mapoly0003s0184 [GO:0006396] RNA processing; [GO:0003677] DNA binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [K11592] endoribonuclease Dicer [EC:3.1.26.-]; [PF02170] PAZ domain; [3.1.26.-] Endoribonucleases producing 5'-phosphomonoesters.; [PTHR14950] HELICASE-RELATED; [GO:0005515] protein binding; [GO:0016891] endoribonuclease activity, producing 5'-phosphomonoesters; [GO:0016787] hydrolase activity; [PF04851] Type III restriction enzyme, res subunit; [PF03368] Dicer dimerisation domain; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF00271] Helicase conserved C-terminal domain; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1; [KOG0701] dsRNA-specific nuclease Dicer and related ribonucleases60.330.6872
47 Mapoly0008s0039 [PTHR23120:SF0] SUBFAMILY NOT NAMED; [PTHR23120] MAESTRO-RELATED HEAT DOMAIN-CONTAINING; [KOG2032] Uncharacterized conserved protein60.790.6507
48 Mapoly0008s0067 [PTHR11751:SF133] PUTATIVE TRANSCRIPTIONAL REGULATOR; [PF12847] Methyltransferase domain; [2.1.1.12] Methionine S-methyltransferase.; [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [PF00155] Aminotransferase class I and II; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED; [K08247] methionine S-methyltransferase [EC:2.1.1.12]63.000.5782
49 Mapoly0025s0051 [PTHR12984] SCY1-RELATED S/T PROTEIN KINASE-LIKE; [GO:0005524] ATP binding; [PTHR12984:SF3] SCY1(YEAST) PROTEIN KINASE-LIKE; [KOG1243] Protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [K08876] SCY1-like63.060.6156
50 Mapoly0108s0010 [PF04424] Protein of unknown function (DUF544); [PTHR18063] NF-E2 INDUCIBLE PROTEIN67.760.6072
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