Guide Gene

Gene ID
Mapoly0091s0010
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0091s0010 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter 0.00 1.0000
1 Mapoly0010s0156 [GO:0009523] photosystem II; [GO:0010027] thylakoid membrane organization; [PF11264] Thylakoid formation protein; [GO:0015979] photosynthesis7.810.8798
2 Mapoly0075s0045 [PTHR26312] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF13174] Tetratricopeptide repeat; [PF13432] Tetratricopeptide repeat10.100.8738
3 Mapoly0057s0005 [K02355] elongation factor EF-G [EC:3.6.5.3]; [PF14492] Elongation Factor G, domain II; [3.6.5.3] Protein-synthesizing GTPase.; [PF00009] Elongation factor Tu GTP binding domain; [KOG0465] Mitochondrial elongation factor; [PF00679] Elongation factor G C-terminus; [PTHR23115:SF13] TRANSLATION ELONGATION FACTOR G; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [PF03764] Elongation factor G, domain IV; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 211.050.8787
4 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein13.110.8782
5 Mapoly0096s0034 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [PTHR11451:SF5] THREONYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [K01868] threonyl-tRNA synthetase [EC:6.1.1.3]; [PTHR11451] TRNA SYNTHETASE-RELATED; [6.1.1.3] Threonine--tRNA ligase.; [PF03129] Anticodon binding domain; [KOG1637] Threonyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity13.270.8622
6 Mapoly0069s0053 [GO:0050660] flavin adenine dinucleotide binding; [K03495] glucose inhibited division protein A; [PTHR11806:SF1] GLUCOSE INHIBITED DIVISION PROTEIN A; [PTHR11806] GLUCOSE INHIBITED DIVISION PROTEIN A; [PF01134] Glucose inhibited division protein A; [KOG2311] NAD/FAD-utilizing protein possibly involved in translation; [GO:0008033] tRNA processing; [PF13932] GidA associated domain 314.830.8549
7 Mapoly0002s0171 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED15.650.8754
8 Mapoly0009s0197 [GO:0005524] ATP binding; [PTHR11584:SF316] SIMILAR TO PHOSPHATIDYLETHANOLAMINE METHYLTRANSFERASE PUTATIVE UNCHARACTERIZED; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0594] Protein kinase PCTAIRE and related kinases; [PTHR11584] SERINE/THREONINE PROTEIN KINASE16.940.8659
9 Mapoly0060s0005 [GO:0005515] protein binding; [PF13417] Glutathione S-transferase, N-terminal domain; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING18.970.8785
10 Mapoly0088s0008 [1.12.98.1] Coenzyme F420 hydrogenase.; [PF04422] Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; [PTHR31332] FAMILY NOT NAMED; [PTHR31332:SF0] SUBFAMILY NOT NAMED; [PF04432] Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; [K00441] coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1]19.900.8219
11 Mapoly0082s0008 [GO:0016020] membrane; [K14445] solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5; [GO:0006814] sodium ion transport; [KOG1281] Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters; [GO:0055085] transmembrane transport; [PTHR10283] SOLUTE CARRIER FAMILY 13 MEMBER; [PF00939] Sodium:sulfate symporter transmembrane region; [GO:0005215] transporter activity21.540.7941
12 Mapoly0061s0098 [PTHR31867] FAMILY NOT NAMED; [PF03330] Rare lipoprotein A (RlpA)-like double-psi beta-barrel; [PF01357] Pollen allergen23.620.8146
13 Mapoly0015s0158 [PF02096] 60Kd inner membrane protein; [K03217] preprotein translocase subunit YidC; [GO:0016021] integral to membrane; [PTHR12428] OXA1; [GO:0051205] protein insertion into membrane26.830.8388
14 Mapoly0157s0020 [GO:0015031] protein transport; [GO:0006457] protein folding; [PF05698] Bacterial trigger factor protein (TF) C-terminus; [PF05697] Bacterial trigger factor protein (TF); [PTHR30560] TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE29.850.8592
15 Mapoly0266s0003 [PTHR23132:SF5] gb def: Probable D-alanine-D-alanine ligase (EC 6.3.2.4); [PF01820] D-ala D-ala ligase N-terminus; [GO:0005737] cytoplasm; [PTHR23132] D-ALANINE--D-ALANINE LIGASE; [GO:0008716] D-alanine-D-alanine ligase activity; [PF07478] D-ala D-ala ligase C-terminus31.650.7825
16 Mapoly0011s0046 [GO:0000287] magnesium ion binding; [GO:0016829] lyase activity; [PF03936] Terpene synthase family, metal binding domain; [GO:0010333] terpene synthase activity33.670.8402
17 Mapoly0135s0004 [PTHR32060] FAMILY NOT NAMED; [PF03572] Peptidase family S41; [GO:0008236] serine-type peptidase activity; [GO:0005515] protein binding; [PF13180] PDZ domain; [GO:0006508] proteolysis; [PTHR32060:SF0] SUBFAMILY NOT NAMED34.350.7438
18 Mapoly0191s0001 [GO:0003723] RNA binding; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005515] protein binding; [PTHR11741] ELONGATION FACTOR TS; [PTHR11741:SF1] gb def: putative mitochondrial elongation factor ts [schizosaccharomyces pombe]; [PF00575] S1 RNA binding domain; [GO:0005622] intracellular; [PF00627] UBA/TS-N domain; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt34.500.8561
19 Mapoly0107s0055 -36.240.8004
20 Mapoly0001s0324 -39.060.8494
21 Mapoly0003s0298 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family43.820.8142
22 Mapoly0043s0057 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; [PF11210] Protein of unknown function (DUF2996)46.800.8492
23 Mapoly0024s0048 [3.1.3.37] Sedoheptulose-bisphosphatase.; [K01100] sedoheptulose-bisphosphatase [EC:3.1.3.37]; [GO:0005975] carbohydrate metabolic process; [GO:0042132] fructose 1,6-bisphosphate 1-phosphatase activity; [PTHR11556] FRUCTOSE-1,6-BISPHOSPHATASE-RELATED; [PTHR11556:SF2] SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLAST; [GO:0042578] phosphoric ester hydrolase activity; [PF00316] Fructose-1-6-bisphosphatase; [KOG1458] Fructose-1,6-bisphosphatase47.750.8524
24 Mapoly0016s0134 [GO:0016857] racemase and epimerase activity, acting on carbohydrates and derivatives; [5.1.3.1] Ribulose-phosphate 3-epimerase.; [PTHR11749] RIBULOSE-5-PHOSPHATE-3-EPIMERASE; [PF00834] Ribulose-phosphate 3 epimerase family; [GO:0005975] carbohydrate metabolic process; [K01783] ribulose-phosphate 3-epimerase [EC:5.1.3.1]; [KOG3111] D-ribulose-5-phosphate 3-epimerase50.990.8495
25 Mapoly0048s0095 [GO:0016020] membrane; [GO:0005524] ATP binding; [GO:0017038] protein import; [PF07516] SecA Wing and Scaffold domain; [PTHR30612] SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM; [PF07517] SecA DEAD-like domain; [PF01043] SecA preprotein cross-linking domain; [K03070] preprotein translocase subunit SecA53.500.8180
26 Mapoly0043s0097 [PF00504] Chlorophyll A-B binding protein; [PTHR21496] FERREDOXIN-RELATED; [PTHR21496:SF0] SUBFAMILY NOT NAMED; [PF13806] Rieske-like [2Fe-2S] domain54.110.8416
27 Mapoly0023s0027 [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [PF04898] Glutamate synthase central domain; [GO:0006537] glutamate biosynthetic process; [GO:0055114] oxidation-reduction process; [GO:0006807] nitrogen compound metabolic process; [GO:0015930] glutamate synthase activity; [1.4.7.1] Glutamate synthase (ferredoxin).; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF01645] Conserved region in glutamate synthase; [KOG0399] Glutamate synthase; [PF00310] Glutamine amidotransferases class-II; [GO:0016638] oxidoreductase activity, acting on the CH-NH2 group of donors; [K00284] glutamate synthase (ferredoxin) [EC:1.4.7.1]; [PF01493] GXGXG motif54.440.8185
28 Mapoly0010s0015 [PF13450] NAD(P)-binding Rossmann-like domain; [5.-.-.-] Isomerases.; [PTHR10668] PHYTOENE DEHYDROGENASE; [KOG4254] Phytoene desaturase; [K09835] carotenoid isomerase [EC:5.-.-.-]54.640.7724
29 Mapoly0194s0011 [PTHR31636] FAMILY NOT NAMED; [PF03514] GRAS domain family55.750.7558
30 Mapoly0139s0019 [PTHR23359] NUCLEOTIDE KINASE; [GO:0005524] ATP binding; [K00939] adenylate kinase [EC:2.7.4.3]; [GO:0019205] nucleobase-containing compound kinase activity; [KOG3078] Adenylate kinase; [PF09353] Domain of unknown function (DUF1995); [GO:0006139] nucleobase-containing compound metabolic process; [PF00406] Adenylate kinase; [2.7.4.3] Adenylate kinase.61.340.8349
31 Mapoly0010s0196 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase61.710.8404
32 Mapoly0133s0008 [KOG0610] Putative serine/threonine protein kinase; [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [K08282] non-specific serine/threonine protein kinase [EC:2.7.11.1]; [GO:0004672] protein kinase activity; [GO:0004871] signal transducer activity; [PF13426] PAS domain; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0007165] signal transduction; [GO:0006468] protein phosphorylation; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE61.850.7577
33 Mapoly0010s0206 [GO:0005515] protein binding; [PTHR13833:SF13] SUBFAMILY NOT NAMED; [PTHR13833] FAMILY NOT NAMED; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase; [PF13905] Thioredoxin-like; [PF01436] NHL repeat63.980.8341
34 Mapoly0016s0090 -66.350.8274
35 Mapoly0039s0078 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family67.500.8138
36 Mapoly0040s0096 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis68.370.8399
37 Mapoly0137s0001 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [GO:0006436] tryptophanyl-tRNA aminoacylation; [GO:0006418] tRNA aminoacylation for protein translation; [KOG2713] Mitochondrial tryptophanyl-tRNA synthetase; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity70.990.8276
38 Mapoly0006s0176 [GO:0005840] ribosome; [PTHR11545:SF2] 50S RIBOSOMAL PROTEIN L13; [GO:0003735] structural constituent of ribosome; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L1373.030.8376
39 Mapoly0114s0017 -73.970.8308
40 Mapoly0007s0019 [PF12014] Domain of unknown function (DUF3506)74.380.6812
41 Mapoly0072s0101 -77.140.8257
42 Mapoly0130s0033 [GO:0006096] glycolysis; [PF00274] Fructose-bisphosphate aldolase class-I; [PTHR11627] FRUCTOSE-BISPHOSPHATE ALDOLASE; [GO:0004332] fructose-bisphosphate aldolase activity; [KOG1557] Fructose-biphosphate aldolase77.770.8289
43 Mapoly0035s0114 [PTHR16254] POTASSIUM/PROTON ANTIPORTER-RELATED; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0006813] potassium ion transport; [GO:0055085] transmembrane transport; [PF02254] TrkA-N domain; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family79.550.8174
44 Mapoly0006s0110 [PTHR24151] FAMILY NOT NAMED; [PF13857] Ankyrin repeats (many copies)80.300.8299
45 Mapoly0034s0091 -80.330.8292
46 Mapoly0039s0077 [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PF08152] GUCT (NUC152) domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding80.500.7984
47 Mapoly0090s0063 [GO:0005840] ribosome; [PF01165] Ribosomal protein S21; [PTHR21109:SF0] SUBFAMILY NOT NAMED; [PTHR21109] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation81.240.8306
48 Mapoly0091s0019 [GO:0016020] membrane; [PTHR12608:SF3] TRANSMEMBRANE PROTEIN FT27 - RELATED; [PTHR12608] TRANSMEMBRANE PROTEIN HTP-1 RELATED; [KOG2881] Predicted membrane protein; [PF01169] Uncharacterized protein family UPF001681.550.8255
49 Mapoly0101s0039 [PTHR11804] PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED81.650.8257
50 Mapoly0158s0023 [PF05479] Photosystem I reaction centre subunit N (PSAN or PSI-N); [GO:0042651] thylakoid membrane; [GO:0005516] calmodulin binding; [GO:0009522] photosystem I; [GO:0015979] photosynthesis81.670.8161
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