Guide Gene

Gene ID
Mapoly0082s0051
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR11129:SF3] SUBFAMILY NOT NAMED; [PTHR11129] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT; [K14137] protein prenyltransferase alpha subunit repeat containing protein 1

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0082s0051 [PTHR11129:SF3] SUBFAMILY NOT NAMED; [PTHR11129] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT; [K14137] protein prenyltransferase alpha subunit repeat containing protein 1 0.00 1.0000
1 Mapoly0151s0004 [GO:0008168] methyltransferase activity; [PTHR12176] UNCHARACTERIZED; [KOG1271] Methyltransferases; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process6.000.7148
2 Mapoly0148s0001 [PF03364] Polyketide cyclase / dehydrase and lipid transport27.290.6787
3 Mapoly0084s0039 [GO:0005524] ATP binding; [K07178] RIO kinase 1 [EC:2.7.11.1]; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF01163] RIO1 family; [GO:0003824] catalytic activity; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [KOG2270] Serine/threonine protein kinase involved in cell cycle control29.500.7003
4 Mapoly0050s0083 [GO:0016020] membrane; [PTHR11827] SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG2082] K+/Cl- cotransporter KCC1 and related transporters; [PF00324] Amino acid permease31.370.6876
5 Mapoly0052s0044 [KOG0953] Mitochondrial RNA helicase SUV3, DEAD-box superfamily; [PF12513] Mitochondrial degradasome RNA helicase subunit C terminal; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR12131] ATP-DEPENDENT RNA AND DNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PTHR12131:SF1] ATP-DEPENDENT DNA HELICASE MGPS38.340.6969
6 Mapoly0102s0039 [GO:0005524] ATP binding; [KOG0576] Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE42.910.6762
7 Mapoly0813s0001 [KOG2019] Metalloendoprotease HMP1 (insulinase superfamily); [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF08367] Peptidase M16C associated; [GO:0006508] proteolysis44.700.6777
8 Mapoly0120s0036 [PTHR21574] UNCHARACTERIZED44.890.6381
9 Mapoly0048s0038 -46.170.6190
10 Mapoly0004s0060 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [K11855] ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.1.2.15]; [KOG1865] Ubiquitin carboxyl-terminal hydrolase; [PTHR24006] FAMILY NOT NAMED48.740.6737
11 Mapoly0041s0058 [GO:0008889] glycerophosphodiester phosphodiesterase activity; [KOG2258] Glycerophosphoryl diester phosphodiesterase; [GO:0006071] glycerol metabolic process; [PTHR23344] GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; [PF03009] Glycerophosphoryl diester phosphodiesterase family52.250.5722
12 Mapoly0037s0017 [PF13855] Leucine rich repeat; [GO:0005515] protein binding; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE54.900.6459
13 Mapoly0040s0042 -63.870.6585
14 Mapoly0026s0045 [KOG4469] Uncharacterized conserved protein; [PTHR12507:SF3] SUBFAMILY NOT NAMED; [PF08737] Rgp1; [PTHR12507] REDUCED GROWTH PHENOTYPE 1 (RGP1, YEAST)-RELATED66.200.6609
15 Mapoly0007s0198 [GO:0003677] DNA binding; [GO:0006351] transcription, DNA-dependent; [PTHR10102:SF1] DNA-DIRECTED RNA POLYMERASE; [PTHR10102] DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; [GO:0003899] DNA-directed RNA polymerase activity; [PF14700] DNA-directed RNA polymerase N-terminal; [2.7.7.6] DNA-directed RNA polymerase.; [PF00940] DNA-dependent RNA polymerase; [K10908] DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]; [KOG1038] Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation70.000.6638
16 Mapoly0006s0259 [PTHR10527:SF5] IMPORTIN-5 (IMPORTIN SUBUNIT BETA-3); [KOG2171] Karyopherin (importin) beta 3; [GO:0005515] protein binding; [PF02985] HEAT repeat; [PTHR10527] IMPORTIN BETA; [PF13646] HEAT repeats72.740.6618
17 Mapoly0044s0018 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [KOG0926] DEAH-box RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold74.700.6659
18 Mapoly0090s0080 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family78.280.6633
19 Mapoly0014s0145 [GO:0008060] ARF GTPase activator activity; [GO:0005737] cytoplasm; [PTHR23180] CENTAURIN/ARF; [GO:0005515] protein binding; [GO:0008270] zinc ion binding; [KOG0521] Putative GTPase activating proteins (GAPs); [GO:0032312] regulation of ARF GTPase activity; [PF00169] PH domain; [PF01412] Putative GTPase activating protein for Arf; [PF03114] BAR domain; [PF12796] Ankyrin repeats (3 copies)80.700.6011
20 Mapoly0050s0061 [GO:0016020] membrane; [GO:0005245] voltage-gated calcium channel activity; [PTHR10037] VOLTAGE-GATED CATION CHANNEL (CALCIUM AND SODIUM); [PF00520] Ion transport protein; [GO:0055085] transmembrane transport; [GO:0006811] ion transport; [PTHR10037:SF92] SODIUM CHANNEL PROTEIN TYPE III ALPHA SUBUNIT-RELATED; [GO:0005216] ion channel activity81.580.6419
21 Mapoly0102s0046 [PF01585] G-patch domain; [PTHR13948] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding81.880.6572
22 Mapoly0115s0070 [KOG0997] Uncharacterized conserved protein Sand; [PF03164] Trafficking protein Mon1; [PTHR13027:SF7] SUBFAMILY NOT NAMED; [PTHR13027] SAND PROTEIN-RELATED84.100.6331
23 Mapoly0027s0115 [PF12656] DExH-box splicing factor binding site; [PTHR15818] G PATCH AND KOW-CONTAINING; [PTHR15818:SF2] SUBFAMILY NOT NAMED; [K13101] G patch domain and KOW motifs-containing protein84.630.6514
24 Mapoly0157s0003 [PF06220] U1 zinc finger; [GO:0008270] zinc ion binding; [PTHR13173] WW DOMAIN BINDING PROTEIN 4; [KOG0150] Spliceosomal protein FBP2185.830.6408
25 Mapoly0167s0022 [PTHR15954] UNCHARACTERIZED; [PF08700] Vps51/Vps67; [PTHR15954:SF4] SUBFAMILY NOT NAMED88.660.6619
26 Mapoly0202s0011 [GO:0003723] RNA binding; [PF02854] MIF4G domain; [GO:0005515] protein binding; [PTHR12839] NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 (UP-FRAMESHIFT SUPPRESSOR 2); [K14327] regulator of nonsense transcripts 2; [PF04050] Up-frameshift suppressor 2; [KOG2051] Nonsense-mediated mRNA decay 2 protein94.540.6416
27 Mapoly0031s0160 [GO:0003723] RNA binding; [PF14608] Zinc finger C-x8-C-x5-C-x3-H type; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR10288:SF5] ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PF00013] KH domain; [GO:0046872] metal ion binding96.560.6517
28 Mapoly0037s0109 [KOG0637] Sucrose transporter and related proteins; [PF13347] MFS/sugar transport protein; [PTHR19432] SUGAR TRANSPORTER102.870.6288
29 Mapoly0014s0075 [PTHR22937:SF18] OS08G0151700 PROTEIN; [KOG2930] SCF ubiquitin ligase, Rbx1 component; [GO:0005515] protein binding; [PTHR22937] RING FINGER CONTAINING PROTEIN; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding105.920.6470
30 Mapoly0090s0088 [KOG0338] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [K13181] ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF93] PREDICTED PROTEIN (FRAGMENT)109.220.6463
31 Mapoly0022s0109 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [KOG1597] Transcription initiation factor TFIIB109.260.6443
32 Mapoly0160s0010 [GO:0005524] ATP binding; [KOG0588] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24343:SF15] CARBON CATABOLITE-DEREPRESSING PROTEIN KINASE; [PF02149] Kinase associated domain 1; [PTHR24343] SERINE/THREONINE KINASE114.370.6393
33 Mapoly0066s0056 [PTHR23115:SF38] EUKARYOTIC RELEASE FACTOR 3-RELATED (ERFS) (HBS1-LIKE); [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0458] Elongation factor 1 alpha; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [K14416] elongation factor 1 alpha-like protein115.150.6119
34 Mapoly0043s0079 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family116.910.6541
35 Mapoly0007s0201 [GO:0006506] GPI anchor biosynthetic process; [PF04987] Phosphatidylinositolglycan class N (PIG-N); [PF01663] Type I phosphodiesterase / nucleotide pyrophosphatase; [KOG2124] Glycosylphosphatidylinositol anchor synthesis protein; [PTHR12250] PHOSPHATIDYLINOSITOL GLYCAN, CLASS N; [GO:0003824] catalytic activity; [GO:0005789] endoplasmic reticulum membrane; [GO:0016740] transferase activity120.560.6161
36 Mapoly0016s0042 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG4393] Predicted pseudouridylate synthase; [PTHR11142:SF1] PSEUDOURIDYLATE SYNTHASE-RELATED; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase.120.700.6430
37 Mapoly0036s0129 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR31221] FAMILY NOT NAMED; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF03106] WRKY DNA -binding domain120.900.5903
38 Mapoly0036s0132 [PTHR22849] WDSAM1 PROTEIN; [GO:0016567] protein ubiquitination; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [GO:0004842] ubiquitin-protein ligase activity; [PF04564] U-box domain; [PF05659] Arabidopsis broad-spectrum mildew resistance protein RPW8121.820.6414
39 Mapoly0023s0075 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [PTHR31190] FAMILY NOT NAMED; [GO:0003700] sequence-specific DNA binding transcription factor activity123.550.6236
40 Mapoly0022s0037 [PF01501] Glycosyl transferase family 8; [2.4.1.43] Polygalacturonate 4-alpha-galacturonosyltransferase.; [K13648] alpha-1,4-galacturonosyltransferase [EC:2.4.1.43]; [PTHR32116] FAMILY NOT NAMED; [GO:0016757] transferase activity, transferring glycosyl groups; [PTHR32116:SF2] SUBFAMILY NOT NAMED127.560.6184
41 Mapoly0038s0060 [PF03151] Triose-phosphate Transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1443] Predicted integral membrane protein129.480.6320
42 Mapoly0027s0127 [PTHR22841:SF4] GB DEF: MKIAA1988 PROTEIN (FRAGMENT); [GO:0005515] protein binding; [PTHR22841] FAMILY NOT NAMED; [K14548] U3 small nucleolar RNA-associated protein 4; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat130.480.6423
43 Mapoly0034s0125 [PF08243] SPT2 chromatin protein; [PTHR22691] YEAST SPT2-RELATED132.820.6132
44 Mapoly0008s0031 [GO:0003677] DNA binding; [PTHR31251] FAMILY NOT NAMED; [GO:0005634] nucleus; [PF03110] SBP domain134.610.6257
45 Mapoly0012s0035 [PTHR14150] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14; [K14567] U3 small nucleolar RNA-associated protein 14; [PF04615] Utp14 protein; [KOG2172] Uncharacterized conserved protein; [GO:0006364] rRNA processing; [PTHR14150:SF12] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14; [GO:0032040] small-subunit processome135.230.6320
46 Mapoly0024s0060 [2.7.11.25] Mitogen-activated protein kinase kinase kinase.; [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE; [K13414] mitogen-activated protein kinase kinase kinase 1, plant [EC:2.7.11.25]137.150.5979
47 Mapoly0154s0047 [PTHR12360] NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 (NFX1); [KOG1952] Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains; [PTHR12360:SF1] NF-X1-TYPE ZINC FINGER PROTEIN NFXL1137.150.6215
48 Mapoly0052s0026 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF03141] Putative S-adenosyl-L-methionine-dependent methyltransferase139.710.6121
49 Mapoly0068s0069 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF13516] Leucine Rich repeat; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [2.7.10.1] Receptor protein-tyrosine kinase.; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [K13418] somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1]; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE142.270.5747
50 Mapoly0014s0151 [PTHR31096] FAMILY NOT NAMED142.460.5486
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