Guide Gene

Gene ID
Mapoly0063s0054
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family

Coexpressed Gene Network

Gene ID Description Information
Mapoly0005s0153 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF14622] Ribonuclease-III-like; [GO:0004525] ribonuclease III activity; [GO:0016075] rRNA catabolic process; [PTHR11207] RIBONUCLEASE III
Mapoly0005s0181 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [6.1.1.17] Glutamate--tRNA ligase.; [KOG1149] Glutamyl-tRNA synthetase (mitochondrial); [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]
Mapoly0008s0194 [6.6.1.1] Magnesium chelatase.; [PF02514] CobN/Magnesium Chelatase; [PF11965] Domain of unknown function (DUF3479); [GO:0009058] biosynthetic process; [GO:0016851] magnesium chelatase activity; [PTHR23304] SPOT2-RELATED; [K03403] magnesium chelatase subunit H [EC:6.6.1.1]
Mapoly0031s0123 [PF13812] Pentatricopeptide repeat domain; [PTHR31407] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF02037] SAP domain
Mapoly0034s0094 [6.6.1.1] Magnesium chelatase.; [PF13519] von Willebrand factor type A domain; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03404] magnesium chelatase subunit D [EC:6.6.1.1]; [GO:0015979] photosynthesis
Mapoly0035s0041 [PTHR14009] LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN; [PF07766] LETM1-like protein
Mapoly0041s0034 [PF03725] 3' exoribonuclease family, domain 2; [GO:0003723] RNA binding; [K00962] polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]; [KOG1067] Predicted RNA-binding polyribonucleotide nucleotidyltransferase; [PF00575] S1 RNA binding domain; [2.7.7.8] Polyribonucleotide nucleotidyltransferase.; [GO:0004654] polyribonucleotide nucleotidyltransferase activity; [PF00013] KH domain; [PTHR11252:SF1] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; [GO:0006402] mRNA catabolic process; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11252] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
Mapoly0042s0009 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Mapoly0058s0025 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353:SF11] RUBISCO SUBUNIT BINDING-PROTEIN ALPHA SUBUNIT, RUBA; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0356] Mitochondrial chaperonin, Cpn60/Hsp60p
Mapoly0060s0041 [PF05303] Protein of unknown function (DUF727); [PF12807] Translation initiation factor eIF3 subunit 135; [PF13236] Clustered mitochondria; [PF13424] Tetratricopeptide repeat; [PTHR12601] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3); [PF15044] Mitochondrial function, CLU-N-term
Mapoly0062s0099 [PF14237] Domain of unknown function (DUF4339)
Mapoly0063s0054 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family
Mapoly0085s0042 [PF04760] Translation initiation factor IF-2, N-terminal region; [PF11987] Translation-initiation factor 2; [K02519] translation initiation factor IF-2; [PF00009] Elongation factor Tu GTP binding domain; [PTHR23115:SF41] TRANSLATION INITIATION FACTOR IF-2; [GO:0003924] GTPase activity; [KOG1145] Mitochondrial translation initiation factor 2 (IF-2; GTPase); [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2
Mapoly0098s0053 [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0947] Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF08148] DSHCT (NUC185) domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Mapoly0101s0060 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0010277] chlorophyllide a oxygenase [overall] activity; [GO:0055114] oxidation-reduction process; [PF08417] Pheophorbide a oxygenase; [K13600] chlorophyllide a oxygenase [EC:1.13.12.14]; [PTHR21266] IRON-SULFUR DOMAIN CONTAINING PROTEIN; [GO:0016491] oxidoreductase activity; [PF00355] Rieske [2Fe-2S] domain; [PTHR21266:SF19] OXIDASE/CHLOROPHYLL SYNTHASE; [1.13.12.14] Transferred entry: 1.14.13.122.
Mapoly0103s0078 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity
Mapoly0111s0056 [GO:0003723] RNA binding; [PF10150] Ribonuclease E/G family; [PTHR30001] RIBONUCLEASE; [PF00686] Starch binding domain
Mapoly0120s0021 -
Mapoly0136s0003 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [GO:0000166] nucleotide binding; [PTHR11702:SF20] GTP-BINDING PROTEIN; [PF09269] Domain of unknown function (DUF1967); [PF01018] GTP1/OBG; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding
Mapoly0163s0012 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [PTHR11766:SF0] SUBFAMILY NOT NAMED; [GO:0000166] nucleotide binding; [KOG2623] Tyrosyl-tRNA synthetase; [K01866] tyrosyl-tRNA synthetase [EC:6.1.1.1]; [PTHR11766] TYROSYL-TRNA SYNTHETASE; [6.1.1.1] Tyrosine--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [PF01479] S4 domain; [GO:0004831] tyrosine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity
Mapoly0186s0003 [GO:0005524] ATP binding; [GO:0006426] glycyl-tRNA aminoacylation; [GO:0005737] cytoplasm; [PF02092] Glycyl-tRNA synthetase beta subunit; [PTHR30075] GLYCYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF02091] Glycyl-tRNA synthetase alpha subunit; [6.1.1.14] Glycine--tRNA ligase.; [GO:0004820] glycine-tRNA ligase activity; [K14164] glycyl-tRNA synthetase [EC:6.1.1.14]