Guide Gene

Gene ID
Mapoly0036s0144
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003723] RNA binding; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [KOG2049] Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily); [PF00806] Pumilio-family RNA binding repeat; [PTHR12537] RNA BINDING PROTEIN PUMILIO-RELATED; [GO:0046872] metal ion binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0036s0144 [GO:0003723] RNA binding; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [KOG2049] Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily); [PF00806] Pumilio-family RNA binding repeat; [PTHR12537] RNA BINDING PROTEIN PUMILIO-RELATED; [GO:0046872] metal ion binding 0.00 1.0000
1 Mapoly0009s0026 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PTHR24223] FAMILY NOT NAMED; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG0054] Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PF00005] ABC transporter2.000.7125
2 Mapoly0069s0005 [PF11919] Domain of unknown function (DUF3437); [KOG1851] Uncharacterized conserved protein; [K06699] proteasome activator subunit 4; [PTHR32170] FAMILY NOT NAMED4.800.7208
3 Mapoly0020s0028 [PTHR21466] FAMILY NOT NAMED12.730.6547
4 Mapoly0134s0014 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter13.230.6959
5 Mapoly0021s0012 [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [PF02810] SEC-C motif; [KOG1865] Ubiquitin carboxyl-terminal hydrolase; [PTHR24006] FAMILY NOT NAMED; [PF01753] MYND finger14.070.7187
6 Mapoly0020s0144 [K11266] MAternally affected uncoordination; [PTHR21394] UNCHARACTERIZED; [PF10345] Cohesin loading factor; [KOG2300] Uncharacterized conserved protein14.460.6871
7 Mapoly0007s0117 -14.490.6980
8 Mapoly0157s0010 [GO:0003677] DNA binding; [GO:0016570] histone modification; [GO:0006352] DNA-dependent transcription, initiation; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0005515] protein binding; [PF03126] Plus-3 domain; [PTHR22884] SET DOMAIN PROTEINS; [PF02213] GYF domain; [GO:0005634] nucleus; [KOG1946] RNA polymerase I transcription factor UAF; [PF02201] SWIB/MDM2 domain; [GO:0046872] metal ion binding15.750.7193
9 Mapoly0156s0019 [KOG0698] Serine/threonine protein phosphatase; [GO:0005515] protein binding; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity; [K01090] protein phosphatase [EC:3.1.3.16]; [3.1.3.16] Phosphoprotein phosphatase.; [PF00498] FHA domain18.380.6824
10 Mapoly0002s0309 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; [GO:0005515] protein binding; [KOG1616] Protein involved in Snf1 protein kinase complex assembly; [PF04739] 5'-AMP-activated protein kinase beta subunit, interation domain19.210.6337
11 Mapoly0024s0066 [GO:0005524] ATP binding; [GO:0005515] protein binding; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE; [PF00498] FHA domain20.200.6953
12 Mapoly0006s0233 [GO:0016021] integral to membrane; [PF02990] Endomembrane protein 70; [KOG1277] Endosomal membrane proteins, EMP70; [PTHR10766:SF14] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN MEMBER 1; [PTHR10766] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN21.020.6444
13 Mapoly0050s0108 [3.6.3.8] Calcium-transporting ATPase.; [GO:0000166] nucleotide binding; [GO:0005516] calmodulin binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0204] Calcium transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [K01537] Ca2+-transporting ATPase [EC:3.6.3.8]; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [PF12515] Ca2+-ATPase N terminal autoinhibitory domain21.210.6689
14 Mapoly0001s0420 [PTHR16212:SF4] SUBFAMILY NOT NAMED; [PF12530] Protein of unknown function (DUF3730); [PTHR16212] FAMILY NOT NAMED23.040.6938
15 Mapoly0154s0043 [GO:0055114] oxidation-reduction process; [GO:0005737] cytoplasm; [KOG2711] Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase; [GO:0006072] glycerol-3-phosphate metabolic process; [GO:0005975] carbohydrate metabolic process; [PF07479] NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PF01210] NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; [GO:0046168] glycerol-3-phosphate catabolic process; [PTHR11728] GLYCEROL-3-PHOSPHATE DEHYDROGENASE; [GO:0051287] NAD binding; [GO:0004367] glycerol-3-phosphate dehydrogenase [NAD+] activity; [GO:0009331] glycerol-3-phosphate dehydrogenase complex27.500.6545
16 Mapoly0104s0012 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR14493] UNCHARACTERIZED; [GO:0046872] metal ion binding27.910.6671
17 Mapoly0043s0039 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PF13771] PHD-like zinc-binding domain28.720.6751
18 Mapoly0093s0032 [GO:0003677] DNA binding; [PF13891] Potential DNA-binding domain; [GO:0006355] regulation of transcription, DNA-dependent; [PF02362] B3 DNA binding domain; [PTHR31677] FAMILY NOT NAMED; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity29.660.6985
19 Mapoly0028s0055 [GO:0008270] zinc ion binding; [PF02207] Putative zinc finger in N-recognin (UBR box); [6.3.2.19] Ubiquitin--protein ligase.; [PTHR21497] UBIQUITIN LIGASE E3 ALPHA-RELATED; [GO:0004842] ubiquitin-protein ligase activity; [K11978] E3 ubiquitin-protein ligase UBR3 [EC:6.3.2.19]29.950.6621
20 Mapoly0069s0004 [KOG0227] Splicing factor 3a, subunit 2; [K12826] splicing factor 3A subunit 2; [PF12874] Zinc-finger of C2H2 type; [PTHR23205:SF0] SUBFAMILY NOT NAMED; [PTHR23205] SPLICING FACTOR 3A SUBUNIT 229.950.6361
21 Mapoly0014s0196 [PTHR12272] FAMILY NOT NAMED; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [KOG3741] Poly(A) ribonuclease subunit; [K12572] PAB-dependent poly(A)-specific ribonuclease subunit 3; [GO:0046872] metal ion binding31.780.6921
22 Mapoly0003s0020 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K09486] hypoxia up-regulated 1; [KOG0104] Molecular chaperones GRP170/SIL1, HSP70 superfamily; [PF00012] Hsp70 protein; [PTHR19375:SF90] HEAT SHOCK PROTEIN 7031.810.6292
23 Mapoly0008s0029 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain33.260.5973
24 Mapoly0026s0110 [GO:0004198] calcium-dependent cysteine-type endopeptidase activity; [PF00648] Calpain family cysteine protease; [PF01067] Calpain large subunit, domain III; [PTHR10183] CALPAIN; [GO:0005622] intracellular; [KOG0045] Cytosolic Ca2+-dependent cysteine protease (calpain), large subunit (EF-Hand protein superfamily); [PF13385] Concanavalin A-like lectin/glucanases superfamily; [GO:0006508] proteolysis35.000.6407
25 Mapoly0144s0028 [GO:0016020] membrane; [PTHR11384] ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER; [GO:0005524] ATP binding; [KOG0060] Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [PF06472] ABC transporter transmembrane region 2; [GO:0016887] ATPase activity; [GO:0006810] transport; [PF00005] ABC transporter36.330.6864
26 Mapoly0184s0008 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PTHR10032] ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF13837] Myb/SANT-like DNA-binding domain36.510.6328
27 Mapoly0020s0112 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family39.190.6077
28 Mapoly0065s0073 [KOG0010] Ubiquitin-like protein; [PTHR10677:SF3] UBIQUITIN FAMILY PROTEIN; [GO:0005515] protein binding; [PTHR10677] UBIQUILIN; [PF00627] UBA/TS-N domain; [PF00240] Ubiquitin family; [K04523] ubiquilin39.660.5712
29 Mapoly0022s0091 [PTHR23339] TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE; [PF14566] Inositol hexakisphosphate40.400.6726
30 Mapoly0079s0068 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF13704] Glycosyl transferase family 240.690.6606
31 Mapoly0042s0064 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [GO:0005515] protein binding; [PF00439] Bromodomain; [KOG1474] Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins41.180.6750
32 Mapoly0096s0071 -42.330.6821
33 Mapoly0033s0108 [KOG1322] GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase; [PF00483] Nucleotidyl transferase; [GO:0009058] biosynthetic process; [PTHR22572] SUGAR-1-PHOSPHATE GUANYL TRANSFERASE; [GO:0016779] nucleotidyltransferase activity; [2.7.7.27] Glucose-1-phosphate adenylyltransferase.; [K00975] glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]44.430.5863
34 Mapoly0124s0009 -44.730.6526
35 Mapoly0103s0058 [KOG1978] DNA mismatch repair protein - MLH2/PMS1/Pms2 family; [GO:0005524] ATP binding; [GO:0032300] mismatch repair complex; [PTHR10073] DNA MISMATCH REPAIR PROTEIN (MLH, PMS, MUTL); [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0006298] mismatch repair; [K10858] DNA mismatch repair protein PMS2; [PTHR10073:SF9] DNA MISMATCH REPAIR PROTEIN PMS1; [PF08676] MutL C terminal dimerisation domain; [GO:0030983] mismatched DNA binding; [PF01119] DNA mismatch repair protein, C-terminal domain47.050.5705
36 Mapoly0029s0023 -48.500.6335
37 Mapoly0105s0047 [PTHR12447] UNCHARACTERIZED WITH ANKYRIN REPEAT DOMAIN; [PF11904] GPCR-chaperone; [KOG0522] Ankyrin repeat protein; [PTHR12447:SF5] UNCHARACTERIZED; [PF13857] Ankyrin repeats (many copies)49.360.6663
38 Mapoly0004s0071 [PTHR21404:SF1] UNCHARACTERIZED; [PTHR21404] HEN1; [PF08242] Methyltransferase domain; [GO:0008171] O-methyltransferase activity; [GO:0006457] protein folding; [GO:0008173] RNA methyltransferase activity; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [KOG0544] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0001510] RNA methylation52.480.6190
39 Mapoly0014s0020 [PF06999] Sucrase/ferredoxin-like; [PTHR31902] FAMILY NOT NAMED52.820.6092
40 Mapoly0002s0089 [PTHR23054] UNCHARACTERIZED; [PF04784] Protein of unknown function, DUF547; [PF14389] Leucine-zipper of ternary complex factor MIP153.920.6120
41 Mapoly0007s0221 [GO:0003677] DNA binding; [KOG0484] Transcription factor PHOX2/ARIX, contains HOX domain; [GO:0006355] regulation of transcription, DNA-dependent; [PF00046] Homeobox domain; [PF02183] Homeobox associated leucine zipper; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [PTHR24326] FAMILY NOT NAMED; [K09338] homeobox-leucine zipper protein54.200.5746
42 Mapoly0134s0039 [GO:0005524] ATP binding; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE55.320.6513
43 Mapoly0024s0124 [GO:0005524] ATP binding; [GO:0003774] motor activity; [PTHR13140] MYOSIN; [GO:0005515] protein binding; [KOG0160] Myosin class V heavy chain; [PF00612] IQ calmodulin-binding motif; [PF00063] Myosin head (motor domain); [GO:0016459] myosin complex57.830.6631
44 Mapoly0001s0304 [KOG0543] FKBP-type peptidyl-prolyl cis-trans isomerase; [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [GO:0005515] protein binding; [PF13414] TPR repeat; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [PF00515] Tetratricopeptide repeat62.450.5824
45 Mapoly0010s0203 [KOG4593] Mitotic checkpoint protein MAD162.850.6238
46 Mapoly0063s0073 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [K14439] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:3.6.4.12]; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [KOG0389] SNF2 family DNA-dependent ATPase64.990.6449
47 Mapoly0033s0056 [PF06203] CCT motif; [PTHR31319] FAMILY NOT NAMED; [GO:0005515] protein binding65.640.5652
48 Mapoly0169s0020 -70.500.6053
49 Mapoly0127s0027 [PF12579] Protein of unknown function (DUF3755); [PTHR14000] FAMILY NOT NAMED70.720.5708
50 Mapoly0019s0053 -72.280.6188
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