Guide Gene

Gene ID
Mapoly0004s0071
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR21404:SF1] UNCHARACTERIZED; [PTHR21404] HEN1; [PF08242] Methyltransferase domain; [GO:0008171] O-methyltransferase activity; [GO:0006457] protein folding; [GO:0008173] RNA methyltransferase activity; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [KOG0544] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0001510] RNA methylation

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0004s0071 [PTHR21404:SF1] UNCHARACTERIZED; [PTHR21404] HEN1; [PF08242] Methyltransferase domain; [GO:0008171] O-methyltransferase activity; [GO:0006457] protein folding; [GO:0008173] RNA methyltransferase activity; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [KOG0544] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0001510] RNA methylation 0.00 1.0000
1 Mapoly0137s0026 [GO:0005515] protein binding; [PTHR14885] UNCHARACTERIZED; [PF00400] WD domain, G-beta repeat5.000.7397
2 Mapoly0184s0008 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PTHR10032] ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF13837] Myb/SANT-like DNA-binding domain5.480.6786
3 Mapoly0079s0068 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF13704] Glycosyl transferase family 213.420.6790
4 Mapoly0064s0037 [PF03151] Triose-phosphate Transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1444] Nucleotide-sugar transporter VRG4/SQV-714.490.6654
5 Mapoly0042s0059 [PTHR16426] UBINUCLEIN/YEMANUCLEIN; [PF08729] HPC2 and ubinuclein domain19.650.7029
6 Mapoly0058s0043 [PF13815] Iguana/Dzip1-like DAZ-interacting protein N-terminal; [PTHR12042] LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE (ALPHA- 1,4-GALACTOSYLTRANSFERASE)20.900.6510
7 Mapoly0103s0058 [KOG1978] DNA mismatch repair protein - MLH2/PMS1/Pms2 family; [GO:0005524] ATP binding; [GO:0032300] mismatch repair complex; [PTHR10073] DNA MISMATCH REPAIR PROTEIN (MLH, PMS, MUTL); [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0006298] mismatch repair; [K10858] DNA mismatch repair protein PMS2; [PTHR10073:SF9] DNA MISMATCH REPAIR PROTEIN PMS1; [PF08676] MutL C terminal dimerisation domain; [GO:0030983] mismatched DNA binding; [PF01119] DNA mismatch repair protein, C-terminal domain21.820.6081
8 Mapoly0050s0108 [3.6.3.8] Calcium-transporting ATPase.; [GO:0000166] nucleotide binding; [GO:0005516] calmodulin binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0204] Calcium transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [K01537] Ca2+-transporting ATPase [EC:3.6.3.8]; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [PF12515] Ca2+-ATPase N terminal autoinhibitory domain22.960.6563
9 Mapoly0037s0107 [PTHR24412] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [PF07707] BTB And C-terminal Kelch; [GO:0005515] protein binding25.510.5923
10 Mapoly0009s0028 [PTHR22812] CHROMOBOX PROTEIN; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain29.330.6805
11 Mapoly0085s0091 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE29.650.6905
12 Mapoly0006s0239 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF03141] Putative S-adenosyl-L-methionine-dependent methyltransferase35.410.6534
13 Mapoly0009s0087 [PTHR24011:SF38] SUBFAMILY NOT NAMED; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0117] Heterogeneous nuclear ribonucleoprotein R (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)36.990.6691
14 Mapoly0001s0121 [PF00641] Zn-finger in Ran binding protein and others; [PTHR23238] RNA BINDING PROTEIN; [KOG1995] Conserved Zn-finger protein; [GO:0008270] zinc ion binding37.740.6730
15 Mapoly0081s0064 -39.600.6156
16 Mapoly0140s0005 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [KOG0942] E3 ubiquitin protein ligase; [6.3.2.19] Ubiquitin--protein ligase.; [K10589] ubiquitin-protein ligase E3 C [EC:6.3.2.19]; [GO:0004842] ubiquitin-protein ligase activity; [PF00632] HECT-domain (ubiquitin-transferase)43.270.6570
17 Mapoly0007s0269 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED44.080.6365
18 Mapoly0073s0017 [PF05641] Agenet domain; [PF01426] BAH domain; [GO:0003682] chromatin binding; [PTHR31917] FAMILY NOT NAMED46.960.6732
19 Mapoly0072s0081 [GO:0016020] membrane; [PF01554] MatE; [GO:0015238] drug transmembrane transporter activity; [GO:0015297] antiporter activity; [GO:0055085] transmembrane transport; [PTHR11206] MULTIDRUG RESISTANCE PROTEIN; [KOG1347] Uncharacterized membrane protein, predicted efflux pump; [GO:0006855] drug transmembrane transport47.250.6631
20 Mapoly0010s0002 [GO:0016020] membrane; [KOG2431] 1, 2-alpha-mannosidase; [K01230] mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]; [PTHR11742:SF7] ENDOPLASMIC RETICULUM MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0005509] calcium ion binding; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [PF01532] Glycosyl hydrolase family 47; [3.2.1.113] Mannosyl-oligosaccharide 1,2-alpha-mannosidase.50.080.6317
21 Mapoly0171s0028 [PF03759] PRONE (Plant-specific Rop nucleotide exchanger); [GO:0005089] Rho guanyl-nucleotide exchange factor activity51.910.6302
22 Mapoly0117s0011 [PTHR11024] PROTEIN TRANSPORT PROTEIN SEC13-RELATED; [GO:0005515] protein binding; [KOG2445] Nuclear pore complex component (sc Seh1); [PF00400] WD domain, G-beta repeat51.960.6299
23 Mapoly0036s0144 [GO:0003723] RNA binding; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [KOG2049] Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily); [PF00806] Pumilio-family RNA binding repeat; [PTHR12537] RNA BINDING PROTEIN PUMILIO-RELATED; [GO:0046872] metal ion binding52.480.6190
24 Mapoly0057s0088 [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [KOG1294] Apurinic/apyrimidinic endonuclease and related enzymes; [GO:0006281] DNA repair; [K10771] AP endonuclease 1 [EC:4.2.99.18]; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE53.360.6600
25 Mapoly0021s0012 [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [PF02810] SEC-C motif; [KOG1865] Ubiquitin carboxyl-terminal hydrolase; [PTHR24006] FAMILY NOT NAMED; [PF01753] MYND finger57.830.6547
26 Mapoly0006s0086 [GO:0016021] integral to membrane; [PF02990] Endomembrane protein 70; [KOG1277] Endosomal membrane proteins, EMP70; [PTHR10766] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN; [PTHR10766:SF14] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN MEMBER 159.500.6361
27 Mapoly0006s0156 -60.790.6429
28 Mapoly0054s0027 [GO:0006338] chromatin remodeling; [PF04795] PAPA-1-like conserved region; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0031011] Ino80 complex; [PTHR21561] FAMILY NOT NAMED; [PF04438] HIT zinc finger61.870.6625
29 Mapoly0052s0017 -69.930.6576
30 Mapoly0009s0135 [PF12348] CLASP N terminal; [PTHR12609] MICROTUBULE ASSOCIATED PROTEIN XMAP215; [PTHR12609:SF0] SUBFAMILY NOT NAMED; [KOG1820] Microtubule-associated protein77.460.6542
31 Mapoly0137s0011 [PF07227] Protein of unknown function (DUF1423)78.490.5864
32 Mapoly0012s0200 [GO:0005685] U1 snRNP; [GO:0006376] mRNA splice site selection; [PF03194] LUC7 N_terminus; [PTHR12375] RNA-BINDING PROTEIN LUC7-RELATED; [KOG0796] Spliceosome subunit; [GO:0003729] mRNA binding78.740.6418
33 Mapoly0134s0039 [GO:0005524] ATP binding; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE78.740.6270
34 Mapoly0001s0528 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0758] Mitochondrial carnitine-acylcarnitine carrier protein80.960.6154
35 Mapoly0052s0082 -83.850.6286
36 Mapoly0004s0242 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain85.190.6279
37 Mapoly0118s0027 [PTHR31642] FAMILY NOT NAMED; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF02458] Transferase family89.060.4691
38 Mapoly0105s0003 [GO:0005524] ATP binding; [K08827] serine/threonine-protein kinase PRP4 [EC:2.7.11.1]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [KOG0670] U4/U6-associated splicing factor PRP4; [PTHR24056:SF45] SERINE/THREONINE-PROTEIN KINASE PRP4 HOMOLOG; [PTHR24056] CELL DIVISION PROTEIN KINASE89.700.6370
39 Mapoly0015s0056 [PF04674] Phosphate-induced protein 1 conserved region; [PTHR31279] FAMILY NOT NAMED90.100.5994
40 Mapoly0006s0082 [PF00097] Zinc finger, C3HC4 type (RING finger); [PTHR12983] FAMILY NOT NAMED; [GO:0046872] metal ion binding90.690.6319
41 Mapoly0002s0277 [PTHR22936:SF15] gb def: Drosophila melanogaster CG15040 gene product; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [KOG2289] Rhomboid family proteins; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis91.230.6258
42 Mapoly0002s0125 [PTHR25040] FAMILY NOT NAMED; [PF11926] Domain of unknown function (DUF3444); [PTHR25040:SF79] SUBFAMILY NOT NAMED; [PF00226] DnaJ domain93.910.6550
43 Mapoly0058s0099 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00035] Double-stranded RNA binding motif; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold97.430.6369
44 Mapoly0114s0035 [PTHR31169] FAMILY NOT NAMED; [PF10497] Zinc-finger domain of monoamine-oxidase A repressor R1100.530.6351
45 Mapoly0177s0019 [KOG0149] Predicted RNA-binding protein SEB4 (RRM superfamily); [PF01480] PWI domain; [PTHR23365] POLY-A BINDING PROTEIN 2; [GO:0006397] mRNA processing; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)101.160.6594
46 Mapoly0063s0073 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [K14439] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:3.6.4.12]; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [KOG0389] SNF2 family DNA-dependent ATPase101.210.6174
47 Mapoly0021s0025 [PF05495] CHY zinc finger; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [KOG1940] Zn-finger protein; [PF14599] Zinc-ribbon; [PTHR21319] RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1; [PF01814] Hemerythrin HHE cation binding domain102.460.5618
48 Mapoly0129s0023 [PTHR11635] CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN; [PF00027] Cyclic nucleotide-binding domain102.880.6215
49 Mapoly0005s0287 [GO:0003723] RNA binding; [PF14608] Zinc finger C-x8-C-x5-C-x3-H type; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR10288:SF5] ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PF00013] KH domain; [GO:0046872] metal ion binding104.610.6155
50 Mapoly0043s0019 [PTHR18860:SF15] 14-3-3-RELATED; [K06630] tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein; [KOG0841] Multifunctional chaperone (14-3-3 family); [PF00244] 14-3-3 protein; [GO:0019904] protein domain specific binding; [PTHR18860] 14-3-3 PROTEIN107.000.5868
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