Guide Gene

Gene ID
Mapoly0029s0120
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF05178] KRI1-like family; [KOG2409] KRR1-interacting protein involved in 40S ribosome biogenesis; [PTHR14490] ZINC FINGER, ZZ TYPE; [PF12936] KRI1-like family C-terminal

Coexpressed Gene Network

Gene ID Description Information
Mapoly0004s0202 -
Mapoly0007s0190 [PTHR12830] FAMILY NOT NAMED; [PTHR12830:SF9] SUBFAMILY NOT NAMED; [PF12862] Anaphase-promoting complex subunit 5; [K03352] anaphase-promoting complex subunit 5; [KOG4322] Anaphase-promoting complex (APC), subunit 5
Mapoly0009s0044 [GO:0003676] nucleic acid binding; [PTHR24622] FAMILY NOT NAMED; [K14573] nucleolar protein 4; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG0127] Nucleolar protein fibrillarin NOP77 (RRM superfamily)
Mapoly0010s0191 [PF04055] Radical SAM superfamily; [PTHR13930] RSAFD1-RELATED; [PF00258] Flavodoxin; [PF08608] Wyosine base formation; [GO:0016491] oxidoreductase activity; [PTHR13930:SF0] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [KOG1160] Fe-S oxidoreductase; [GO:0010181] FMN binding
Mapoly0019s0115 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF14392] Zinc knuckle; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding
Mapoly0022s0124 -
Mapoly0024s0107 [PF07719] Tetratricopeptide repeat; [GO:0005515] protein binding; [PF13414] TPR repeat; [K03350] anaphase-promoting complex subunit 3; [KOG1126] DNA-binding cell division cycle control protein; [PF13181] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PTHR12558:SF11] CELL DIVISION CYCLE 27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 3
Mapoly0029s0120 [PF05178] KRI1-like family; [KOG2409] KRR1-interacting protein involved in 40S ribosome biogenesis; [PTHR14490] ZINC FINGER, ZZ TYPE; [PF12936] KRI1-like family C-terminal
Mapoly0031s0090 [KOG0379] Kelch repeat-containing proteins; [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain
Mapoly0039s0098 [PF13812] Pentatricopeptide repeat domain; [PF01713] Smr domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family
Mapoly0041s0093 [PF09368] Sas10 C-terminal domain; [PF04000] Sas10/Utp3/C1D family; [PTHR13237] SOMETHING ABOUT SILENCING PROTEIN 10-RELATED; [KOG3118] Disrupter of silencing SAS10
Mapoly0057s0025 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG2553] Pseudouridylate synthase; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase.
Mapoly0063s0071 [GO:0005515] protein binding; [K12176] COP9 signalosome complex subunit 2; [KOG1464] COP9 signalosome, subunit CSN2; [PF01399] PCI domain; [PTHR10678] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2
Mapoly0065s0046 [PTHR15327:SF0] SUBFAMILY NOT NAMED; [PTHR15327] MICROFIBRIL-ASSOCIATED PROTEIN; [KOG1425] Microfibrillar-associated protein MFAP1; [PF06991] Splicing factor, Prp19-binding domain; [K13110] microfibrillar-associated protein 1
Mapoly0066s0020 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family
Mapoly0075s0086 -
Mapoly0102s0024 [GO:0006355] regulation of transcription, DNA-dependent; [PF14443] DBC1; [KOG3227] Calcium-responsive transcription coactivator; [PTHR14304] P30 DBC PROTEIN
Mapoly0108s0039 [GO:0001522] pseudouridine synthesis; [GO:0042254] ribosome biogenesis; [PTHR31633] FAMILY NOT NAMED; [PF04410] Gar1/Naf1 RNA binding region
Mapoly0131s0026 [GO:0003677] DNA binding; [K13211] GC-rich sequence DNA-binding factor; [GO:0006355] regulation of transcription, DNA-dependent; [PF07842] GC-rich sequence DNA-binding factor-like protein; [PTHR12214] GC-RICH SEQUENCE DNA-BINDING FACTOR; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [PTHR12214:SF0] SUBFAMILY NOT NAMED
Mapoly0145s0019 [K03353] anaphase-promoting complex subunit 6; [PF13414] TPR repeat; [KOG1173] Anaphase-promoting complex (APC), Cdc16 subunit; [PF13424] Tetratricopeptide repeat; [PTHR12558:SF9] CELL DIVISION CYCLE 16; [PTHR12558] CELL DIVISION CYCLE 16,23,27; [PF12895] Anaphase-promoting complex, cyclosome, subunit 3
Mapoly0158s0003 [PF13921] Myb-like DNA-binding domain