Guide Gene

Gene ID
Mapoly0027s0035
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG2006] WD40 repeat protein; [PTHR22746] FAMILY NOT NAMED; [PF07064] RIC1

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0027s0035 [KOG2006] WD40 repeat protein; [PTHR22746] FAMILY NOT NAMED; [PF07064] RIC1 0.00 1.0000
1 Mapoly0026s0045 [KOG4469] Uncharacterized conserved protein; [PTHR12507:SF3] SUBFAMILY NOT NAMED; [PF08737] Rgp1; [PTHR12507] REDUCED GROWTH PHENOTYPE 1 (RGP1, YEAST)-RELATED2.000.8370
2 Mapoly0031s0138 [KOG1931] Putative transmembrane protein; [PTHR13251] EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1; [PF11817] Foie gras liver health family 1; [PF12584] Trafficking protein particle complex subunit 10, TRAPPC102.830.8477
3 Mapoly0102s0039 [GO:0005524] ATP binding; [KOG0576] Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE4.580.8228
4 Mapoly0095s0011 [PF10475] Protein of unknown function N-terminal domain (DUF2450); [PTHR12965] VACUOLAR PROTEIN SORTING 54; [KOG2115] Vacuolar sorting protein VPS45; [PTHR12965:SF0] SUBFAMILY NOT NAMED; [GO:0042147] retrograde transport, endosome to Golgi; [PF07928] Vps54-like protein6.320.8124
5 Mapoly0001s0394 [PF13855] Leucine rich repeat; [KOG4658] Apoptotic ATPase; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN; [GO:0043531] ADP binding; [PF00931] NB-ARC domain9.220.8045
6 Mapoly0031s0124 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG4462] WASP-interacting protein VRP1/WIP, contains WH2 domain; [PF00400] WD domain, G-beta repeat11.620.7869
7 Mapoly0104s0022 [PF00168] C2 domain; [PTHR10024] SYNAPTOTAGMIN; [GO:0005515] protein binding; [PF08372] Plant phosphoribosyltransferase C-terminal13.420.7802
8 Mapoly0160s0010 [GO:0005524] ATP binding; [KOG0588] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24343:SF15] CARBON CATABOLITE-DEREPRESSING PROTEIN KINASE; [PF02149] Kinase associated domain 1; [PTHR24343] SERINE/THREONINE KINASE15.230.7909
9 Mapoly0003s0046 [GO:0016020] membrane; [PTHR12961] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2; [GO:0015031] protein transport; [KOG2307] Low density lipoprotein receptor; [GO:0007030] Golgi organization; [PF06148] COG (conserved oligomeric Golgi) complex component, COG2; [PF12022] Domain of unknown function (DUF3510)15.490.7727
10 Mapoly0100s0023 [GO:0005086] ARF guanyl-nucleotide exchange factor activity; [PF12783] Guanine nucleotide exchange factor in Golgi transport N-terminal; [PTHR10663] GUANYL-NUCLEOTIDE EXCHANGE FACTOR; [PF01369] Sec7 domain; [GO:0032012] regulation of ARF protein signal transduction; [KOG0928] Pattern-formation protein/guanine nucleotide exchange factor17.320.7922
11 Mapoly0063s0003 [PTHR10241] LETHAL(2) GIANT LARVAE PROTEIN; [GO:0016192] vesicle-mediated transport; [GO:0016021] integral to membrane; [PTHR10241:SF25] SUBFAMILY NOT NAMED; [PF00957] Synaptobrevin; [K08518] syntaxin binding protein 5 (tomosyn); [KOG1983] Tomosyn and related SNARE-interacting proteins18.890.7913
12 Mapoly0001s0267 [GO:0071203] WASH complex; [PTHR31409:SF0] SUBFAMILY NOT NAMED; [PF14745] WASH complex subunit 7, N-terminal; [KOG3578] Uncharacterized conserved protein; [PF14746] WASH complex subunit 7, C-terminal; [PF14744] WASH complex subunit 7; [PTHR31409] FAMILY NOT NAMED19.440.7767
13 Mapoly0021s0072 [GO:0005085] guanyl-nucleotide exchange factor activity; [GO:0007264] small GTPase mediated signal transduction; [PTHR23317] DEDICATOR OF CYTOKINESIS (DOCK); [PF14429] C2 domain in Dock180 and Zizimin proteins; [PF06920] Dedicator of cytokinesis; [KOG1997] PH domain-containing protein22.580.7839
14 Mapoly0001s0303 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PF00433] Protein kinase C terminal domain; [KOG0605] NDR and related serine/threonine kinases; [GO:0006468] protein phosphorylation; [PTHR24358] SERINE/THREONINE-PROTEIN KINASE 38; [GO:0004674] protein serine/threonine kinase activity23.920.7368
15 Mapoly0087s0075 [PF09735] Membrane-associated apoptosis protein; [PTHR12093] FAMILY NOT NAMED; [KOG1917] Membrane-associated hematopoietic protein24.800.7740
16 Mapoly0021s0082 [GO:0005524] ATP binding; [PTHR24222] FAMILY NOT NAMED; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PF00005] ABC transporter25.000.7594
17 Mapoly0122s0020 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF07716] Basic region leucine zipper25.480.7251
18 Mapoly0013s0180 [PF12329] TATA element modulatory factor 1 DNA binding; [PTHR13140] MYOSIN; [KOG4673] Transcription factor TMF, TATA element modulatory factor; [PF12325] TATA element modulatory factor 1 TATA binding27.500.7576
19 Mapoly0006s0080 [GO:0005097] Rab GTPase activator activity; [PTHR21422:SF3] SUBFAMILY NOT NAMED; [PF13890] Rab3 GTPase-activating protein catalytic subunit; [PTHR21422] FAMILY NOT NAMED27.780.6669
20 Mapoly0502s0001 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR16223] FAMILY NOT NAMED30.410.7407
21 Mapoly0077s0054 [PF07919] Gryzun, putative trafficking through Golgi; [PTHR14374] FOIE GRAS; [PF11817] Foie gras liver health family 130.980.7596
22 Mapoly0083s0022 [PTHR15288] SUPPRESSION OF TUMORIGENICITY 5 (ST5); [PF02141] DENN (AEX-3) domain; [PF03456] uDENN domain34.250.7320
23 Mapoly0022s0096 [PTHR21514] UNCHARACTERIZED; [PTHR21514:SF0] SUBFAMILY NOT NAMED34.500.7433
24 Mapoly0013s0066 [KOG2761] START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer; [PF01852] START domain; [PTHR12136] STEROIDOGENIC ACUTE REGULATORY PROTEIN (STAR); [PF00169] PH domain; [GO:0008289] lipid binding; [PF07059] Protein of unknown function (DUF1336)34.700.7374
25 Mapoly0133s0047 [PTHR23213] FORMIN-RELATED; [PF02181] Formin Homology 2 Domain35.310.7572
26 Mapoly0062s0067 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF03141] Putative S-adenosyl-L-methionine-dependent methyltransferase37.130.6652
27 Mapoly0133s0025 [PTHR15495] NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006505] GPI anchor metabolic process; [GO:0006886] intracellular protein transport; [PF07819] PGAP1-like protein; [PTHR15495:SF7] SPHINGOSINE-1-PHOSPHATE LYASE-RELATED; [KOG3724] Negative regulator of COPII vesicle formation38.180.7670
28 Mapoly0002s0262 [K07204] regulatory associated protein of mTOR; [PF14538] Raptor N-terminal CASPase like domain; [GO:0005515] protein binding; [GO:0031929] TOR signaling cascade; [PTHR12848] FAMILY NOT NAMED; [GO:0031931] TORC1 complex; [PF00400] WD domain, G-beta repeat; [KOG1517] Guanine nucleotide binding protein MIP139.710.7664
29 Mapoly0068s0063 -39.760.7705
30 Mapoly0053s0042 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR18921] MYOSIN HEAVY CHAIN - RELATED40.300.7251
31 Mapoly0026s0110 [GO:0004198] calcium-dependent cysteine-type endopeptidase activity; [PF00648] Calpain family cysteine protease; [PF01067] Calpain large subunit, domain III; [PTHR10183] CALPAIN; [GO:0005622] intracellular; [KOG0045] Cytosolic Ca2+-dependent cysteine protease (calpain), large subunit (EF-Hand protein superfamily); [PF13385] Concanavalin A-like lectin/glucanases superfamily; [GO:0006508] proteolysis41.560.6765
32 Mapoly0077s0055 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [K11665] DNA helicase INO80 [EC:3.6.4.12]; [PTHR10799:SF213] DNA HELICASE INO80-RELATED; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [PF13892] DNA-binding domain; [KOG0388] SNF2 family DNA-dependent ATPase43.120.7830
33 Mapoly0012s0079 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF03141] Putative S-adenosyl-L-methionine-dependent methyltransferase43.790.6841
34 Mapoly0004s0082 [GO:0005515] protein binding; [PF00439] Bromodomain; [K11723] bromodomain-containing protein 7/9; [PTHR22881] BROMODOMAIN CONTAINING PROTEIN45.030.7796
35 Mapoly0056s0046 [GO:0005097] Rab GTPase activator activity; [KOG2197] Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain48.500.6797
36 Mapoly0106s0048 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PTHR24009] FAMILY NOT NAMED; [GO:0046872] metal ion binding; [PF12872] OST-HTH/LOTUS domain50.410.6901
37 Mapoly0061s0111 [GO:0016020] membrane; [PF00571] CBS domain; [KOG0474] Cl- channel CLC-7 and related proteins (CLC superfamily); [GO:0006821] chloride transport; [PF00654] Voltage gated chloride channel; [GO:0055085] transmembrane transport; [GO:0005247] voltage-gated chloride channel activity; [GO:0030554] adenyl nucleotide binding; [PTHR11689] CHLORIDE CHANNEL50.740.6988
38 Mapoly0001s0335 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation51.960.7161
39 Mapoly0034s0017 [GO:0006355] regulation of transcription, DNA-dependent; [PF02309] AUX/IAA family; [PTHR31734] FAMILY NOT NAMED; [GO:0005634] nucleus53.100.7236
40 Mapoly0075s0050 [GO:0006355] regulation of transcription, DNA-dependent; [PF02309] AUX/IAA family; [GO:0005634] nucleus; [PTHR31384] FAMILY NOT NAMED53.100.6554
41 Mapoly0033s0028 [PTHR21736:SF15] SUBFAMILY NOT NAMED; [PF07227] Protein of unknown function (DUF1423); [PTHR21736] VERNALIZATION-INSENSITIVE PROTEIN 353.440.7642
42 Mapoly0076s0014 [GO:0016020] membrane; [K10999] cellulose synthase A [EC:2.4.1.12]; [PF14569] Zinc-binding RING-finger; [2.4.1.12] Cellulose synthase (UDP-forming).; [PTHR13301] X-BOX TRANSCRIPTION FACTOR-RELATED; [GO:0016760] cellulose synthase (UDP-forming) activity; [GO:0030244] cellulose biosynthetic process; [PF03552] Cellulose synthase54.080.7354
43 Mapoly0047s0129 [PF14309] Domain of unknown function (DUF4378); [PF14383] DUF761-associated sequence motif; [PTHR21726] PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED57.310.7167
44 Mapoly0048s0038 -57.830.6616
45 Mapoly0015s0202 [PF00018] SH3 domain; [GO:0005515] protein binding; [PTHR12602] FORMIN BINDING PROTEIN AND RELATED PROTEINS57.970.7394
46 Mapoly0019s0183 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PF00433] Protein kinase C terminal domain; [KOG0605] NDR and related serine/threonine kinases; [GO:0006468] protein phosphorylation; [PTHR24358] SERINE/THREONINE-PROTEIN KINASE 38; [GO:0004674] protein serine/threonine kinase activity59.700.7420
47 Mapoly0025s0059 [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00759] Glycosyl hydrolase family 9; [PTHR22298] ENDO-1,4-BETA-GLUCANASE61.250.6466
48 Mapoly0133s0001 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE; [KOG0201] Serine/threonine protein kinase61.820.7398
49 Mapoly0105s0061 [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)63.620.7613
50 Mapoly0187s0007 [PTHR12363] TRANSPORTIN 3 AND IMPORTIN 13; [PF03810] Importin-beta N-terminal domain; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding; [KOG2081] Nuclear transport regulator; [PF08389] Exportin 1-like protein64.750.7450
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