Guide Gene

Gene ID
Mapoly0026s0068
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR24414] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif; [PF00646] F-box domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0026s0068 [PTHR24414] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif; [PF00646] F-box domain 0.00 1.0000
1 Mapoly0054s0047 -2.450.7068
2 Mapoly0154s0042 -9.490.5881
3 Mapoly0185s0018 [PF12171] Zinc-finger double-stranded RNA-binding; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED; [KOG3408] U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing; [PTHR20863:SF2] ZINC FINGER PROTEIN 593-RELATED20.400.6480
4 Mapoly0090s0083 [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PTHR23149] G PATCH DOMAIN CONTAINING PROTEIN36.740.5771
5 Mapoly0035s0067 [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PTHR11082:SF4] TRNA-DIHYDROURIDINE SYNTHASE 2; [PF01207] Dihydrouridine synthase (Dus); [KOG2335] tRNA-dihydrouridine synthase; [GO:0008033] tRNA processing; [PTHR11082] TRNA-DIHYDROURIDINE SYNTHASE; [GO:0017150] tRNA dihydrouridine synthase activity; [K05543] tRNA-dihydrouridine synthase 2 [EC:1.-.-.-]; [1.-.-.-] Oxidoreductases.36.860.6061
6 Mapoly0014s0024 -42.470.5351
7 Mapoly0045s0142 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding45.870.5959
8 Mapoly0108s0036 [GO:0030001] metal ion transport; [3.6.3.4] Cu(2+)-exporting ATPase.; [GO:0000166] nucleotide binding; [K01533] Cu2+-exporting ATPase [EC:3.6.3.4]; [PF00702] haloacid dehalogenase-like hydrolase; [PTHR24093] FAMILY NOT NAMED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding; [KOG0207] Cation transport ATPase; [PF00122] E1-E2 ATPase47.330.4815
9 Mapoly0128s0004 -47.620.5834
10 Mapoly0005s0129 [KOG0466] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase); [PF00009] Elongation factor Tu GTP binding domain; [PF09173] Initiation factor eIF2 gamma, C terminal; [PTHR23115:SF9] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT (EIF-2- GAMMA); [GO:0003924] GTPase activity; [K03242] translation initiation factor eIF-2 gamma subunit; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 251.170.5618
11 Mapoly0095s0009 [GO:0005840] ribosome; [PF01667] Ribosomal protein S27; [GO:0003735] structural constituent of ribosome; [PTHR11594] 40S RIBOSOMAL PROTEIN S27; [GO:0005622] intracellular; [KOG1779] 40s ribosomal protein S27; [K02978] small subunit ribosomal protein S27e; [GO:0006412] translation54.910.5942
12 Mapoly0024s0037 [K13151] snurportin-1; [KOG3132] m3G-cap-specific nuclear import receptor (Snurportin1); [PTHR13403:SF6] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1); [PTHR13403] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1)65.830.5494
13 Mapoly0155s0005 [KOG0296] Angio-associated migratory cell protein (contains WD40 repeats); [GO:0005515] protein binding; [PTHR19857] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat77.330.5322
14 Mapoly0020s0123 [PTHR12642] FAMILY NOT NAMED; [PTHR12642:SF0] SUBFAMILY NOT NAMED; [KOG3163] Uncharacterized conserved protein related to ribosomal protein S8E; [PF01201] Ribosomal protein S8e82.120.5773
15 Mapoly0043s0113 [KOG4771] Nucleolar protein (NOP16) involved in 60S ribosomal subunit biogenesis; [PTHR13243] HSPC111 PROTEIN-RELATED; [PF09420] Ribosome biogenesis protein Nop1689.710.5624
16 Mapoly0008s0090 [GO:0003723] RNA binding; [KOG3273] Predicted RNA-binding protein Pno1p interacting with Nob1p and involved in 26S proteasome assembly; [K11884] RNA-binding protein PNO1; [PF00013] KH domain; [PTHR12826] FAMILY NOT NAMED90.950.5657
17 Mapoly0121s0038 [GO:0016020] membrane; [PTHR31965] FAMILY NOT NAMED; [PF00892] EamA-like transporter family93.240.5343
18 Mapoly1100s0002 [GO:0042254] ribosome biogenesis; [KOG1723] 60s ribosomal protein L30 isolog; [K02896] large subunit ribosomal protein L24e; [PF01246] Ribosomal protein L24e; [PTHR10792] 60S RIBOSOMAL PROTEIN L2495.920.5694
19 Mapoly0006s0264 [PF00687] Ribosomal protein L1p/L10e family; [K02865] large subunit ribosomal protein L10Ae; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1570] 60S ribosomal protein L10A97.900.5596
20 Mapoly0108s0044 [GO:0004112] cyclic-nucleotide phosphodiesterase activity; [PF07823] Cyclic phosphodiesterase-like protein98.490.5275
21 Mapoly0072s0029 [GO:0003723] RNA binding; [GO:0008408] 3'-5' exonuclease activity; [PF01612] 3'-5' exonuclease; [PF00013] KH domain; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [PTHR12124] POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED103.630.5644
22 Mapoly0069s0078 [GO:0005840] ribosome; [PF04758] Ribosomal protein S30; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12650] 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI; [GO:0006412] translation; [KOG0009] Ubiquitin-like/40S ribosomal S30 protein fusion110.360.5607
23 Mapoly0050s0072 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase113.950.5279
24 Mapoly0046s0110 [K00540] formate acetyltransferase activating enzyme [EC:1.97.1.4]; [1.-.-.-] Oxidoreductases.122.960.5363
25 Mapoly0004s0172 [GO:0005840] ribosome; [PF00203] Ribosomal protein S19; [KOG0898] 40S ribosomal protein S15; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation; [K02958] small subunit ribosomal protein S15e; [PTHR11880] RIBOSOMAL PROTEIN S19P FAMILY MEMBER124.260.5499
26 Mapoly0002s0291 [GO:0016020] membrane; [PF01758] Sodium Bile acid symporter family; [GO:0008508] bile acid:sodium symporter activity; [GO:0006814] sodium ion transport; [KOG2718] Na+-bile acid cotransporter; [PTHR10361] SODIUM-BILE ACID COTRANSPORTER124.290.5236
27 Mapoly0059s0023 [PTHR23365] POLY-A BINDING PROTEIN 2; [KOG4208] Nucleolar RNA-binding protein NIFK; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)125.400.5519
28 Mapoly0098s0025 [GO:0005840] ribosome; [K02991] small subunit ribosomal protein S6e; [PTHR11502] 40S RIBOSOMAL PROTEIN S6; [KOG1646] 40S ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01092] Ribosomal protein S6e; [GO:0006412] translation126.930.5503
29 Mapoly0185s0005 [GO:0005515] protein binding; [PF00043] Glutathione S-transferase, C-terminal domain; [PF02798] Glutathione S-transferase, N-terminal domain; [KOG0867] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING134.370.5125
30 Mapoly0005s0122 [PTHR23056] CALCINEURIN B; [K06268] protein phosphatase 3, regulatory subunit; [PF13499] EF-hand domain pair; [KOG0034] Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein; [GO:0005509] calcium ion binding134.470.5497
31 Mapoly0025s0074 [PTHR11991:SF2] TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED; [PF00838] Translationally controlled tumour protein; [PTHR11991] TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED; [KOG1727] Microtubule-binding protein (translationally controlled tumor protein)134.540.5493
32 Mapoly0127s0012 [PTHR13557:SF1] gb def: hypothetical protein xp_167260 [homo sapiens]; [PTHR13557] UNCHARACTERIZED136.250.5501
33 Mapoly0023s0108 [K01637] isocitrate lyase [EC:4.1.3.1]; [PF00463] Isocitrate lyase family; [GO:0004451] isocitrate lyase activity; [PTHR21631:SF3] ISOCITRATE LYASE; [PTHR21631] ISOCITRATE LYASE/MALATE SYNTHASE; [KOG1260] Isocitrate lyase; [4.1.3.1] Isocitrate lyase.; [GO:0019752] carboxylic acid metabolic process139.940.4837
34 Mapoly0118s0037 [GO:0005840] ribosome; [K02883] large subunit ribosomal protein L18e; [PF00828] Ribosomal protein L18e/L15; [KOG1714] 60s ribosomal protein L18; [GO:0003735] structural constituent of ribosome; [PTHR10934] 60S RIBOSOMAL PROTEIN L18; [GO:0005622] intracellular; [GO:0006412] translation144.310.5484
35 Mapoly0099s0009 -144.600.4613
36 Mapoly0083s0051 [PF12576] Protein of unknown function (DUF3754)144.780.5046
37 Mapoly0050s0096 [PF00327] Ribosomal protein L30p/L7e; [K02937] large subunit ribosomal protein L7e; [PTHR11524] 60S RIBOSOMAL PROTEIN L7; [PF08079] Ribosomal L30 N-terminal domain; [KOG3184] 60S ribosomal protein L7151.400.5441
38 Mapoly0038s0051 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [PTHR19211:SF15] ATP-BINDING CASSETTE, SUB-FAMILY F (GCN20), MEMBER 2; [GO:0016887] ATPase activity; [KOG0927] Predicted transporter (ABC superfamily); [K06185] ATP-binding cassette, sub-family F, member 2; [PF12848] ABC transporter; [PF00005] ABC transporter153.110.4647
39 Mapoly0071s0098 [GO:0005840] ribosome; [PTHR12010] 40S RIBOSOMAL PROTEIN S29; [KOG3506] 40S ribosomal protein S29; [K02980] small subunit ribosomal protein S29e; [PF00253] Ribosomal protein S14p/S29e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation155.920.5490
40 Mapoly0014s0052 -161.200.5436
41 Mapoly0064s0119 [GO:0005840] ribosome; [GO:0005515] protein binding; [K02927] large subunit ribosomal protein L40e; [GO:0003735] structural constituent of ribosome; [KOG0003] Ubiquitin/60s ribosomal protein L40 fusion; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [GO:0006412] translation; [PF01020] Ribosomal L40e family161.810.5465
42 Mapoly0084s0049 [GO:0005515] protein binding; [K03249] translation initiation factor eIF-3 subunit 5; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [PTHR10540:SF6] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F; [KOG2975] Translation initiation factor 3, subunit f (eIF-3f); [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED161.930.5426
43 Mapoly0012s0119 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PF00467] KOW motif; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG0378] 40S ribosomal protein S4; [PTHR11581] 30S/40S RIBOSOMAL PROTEIN S4; [PF08071] RS4NT (NUC023) domain; [GO:0006412] translation; [PF01479] S4 domain; [PF00900] Ribosomal family S4e; [K02987] small subunit ribosomal protein S4e163.900.5362
44 Mapoly0085s0030 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P450167.030.4780
45 Mapoly0124s0041 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation; [K02964] small subunit ribosomal protein S18e168.580.5436
46 Mapoly0006s0241 [PF00687] Ribosomal protein L1p/L10e family; [K02865] large subunit ribosomal protein L10Ae; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1570] 60S ribosomal protein L10A170.700.5416
47 Mapoly0004s0109 [GO:0005515] protein binding; [PTHR19868] RECEPTOR FOR ACTIVATED PROTEIN KINASE C (RACK1); [KOG0279] G protein beta subunit-like protein; [PTHR19868:SF0] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat173.850.5048
48 Mapoly0001s0020 [PF13837] Myb/SANT-like DNA-binding domain178.910.4738
49 Mapoly0001s0237 [GO:0005840] ribosome; [KOG0746] 60S ribosomal protein L3 and related proteins; [PF00297] Ribosomal protein L3; [PTHR11363] 60S RIBOSOMAL PROTEIN L3-RELATED; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02925] large subunit ribosomal protein L3e; [GO:0006412] translation179.110.4964
50 Mapoly0007s0109 -179.780.5357
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