Guide Gene

Gene ID
Mapoly0020s0029
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG1985] Vesicle coat complex COPII, subunit SEC24/subunit SFB2; [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0020s0029 [KOG1985] Vesicle coat complex COPII, subunit SEC24/subunit SFB2; [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport 0.00 1.0000
1 Mapoly0108s0006 [GO:0055114] oxidation-reduction process; [PF03721] UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; [PTHR11374:SF3] UDP-GLUCOSE 6-DEHYDROGENASE; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0003979] UDP-glucose 6-dehydrogenase activity; [GO:0051287] NAD binding; [PTHR11374] UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE2.650.7633
2 Mapoly0023s0047 [PF03214] Reversibly glycosylated polypeptide; [PTHR31682] FAMILY NOT NAMED; [K13379] reversibly glycosylated polypeptide/UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.-]; [GO:0030244] cellulose biosynthetic process; [GO:0016866] intramolecular transferase activity; [2.4.1.-] Hexosyltransferases.; [5.4.99.-] Transferring other groups.4.900.7312
3 Mapoly1179s0001 [GO:0055114] oxidation-reduction process; [PF03720] UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; [PTHR11374:SF3] UDP-GLUCOSE 6-DEHYDROGENASE; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0003979] UDP-glucose 6-dehydrogenase activity; [GO:0051287] NAD binding; [PTHR11374] UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE; [PF00984] UDP-glucose/GDP-mannose dehydrogenase family, central domain7.550.7378
4 Mapoly0037s0051 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN7.940.7059
5 Mapoly0108s0005 [KOG2666] UDP-glucose/GDP-mannose dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03720] UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; [PF03721] UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; [PTHR11374:SF3] UDP-GLUCOSE 6-DEHYDROGENASE; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [1.1.1.22] UDP-glucose 6-dehydrogenase.; [GO:0003979] UDP-glucose 6-dehydrogenase activity; [GO:0051287] NAD binding; [PTHR11374] UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE; [PF00984] UDP-glucose/GDP-mannose dehydrogenase family, central domain; [K00012] UDPglucose 6-dehydrogenase [EC:1.1.1.22]9.060.7541
6 Mapoly0133s0036 [GO:0016020] membrane; [K06816] golgi apparatus protein 1; [PTHR11884] SELECTIN LIGAND RELATED; [PTHR11884:SF1] gb def: cysteine-rich fibroblast growth factor receptor; [PF00839] Cysteine rich repeat10.200.7054
7 Mapoly0035s0059 [KOG0747] Putative NAD+-dependent epimerases; [4.2.1.76] UDP-glucose 4,6-dehydratase.; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [K12450] UDP-glucose 4,6-dehydratase [EC:4.2.1.76]; [GO:0009225] nucleotide-sugar metabolic process; [GO:0008460] dTDP-glucose 4,6-dehydratase activity; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE; [PTHR10366:SF41] DTDP-GLUCOSE 4,6-DEHYDRATASE14.970.6735
8 Mapoly0054s0016 [PTHR22601] ISP4 LIKE PROTEIN; [GO:0055085] transmembrane transport; [KOG2262] Sexual differentiation process protein ISP4; [PF03169] OPT oligopeptide transporter protein17.750.6403
9 Mapoly0108s0027 [PTHR10110] SODIUM/HYDROGEN EXCHANGER; [KOG1965] Sodium/hydrogen exchanger protein; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family23.350.7233
10 Mapoly0061s0038 [PTHR13166] PROTEIN C6ORF149; [PF05347] Complex 1 protein (LYR family)24.980.6229
11 Mapoly0036s0101 -25.880.6858
12 Mapoly0037s0012 [KOG2357] Uncharacterized conserved protein; [PTHR12883] ADIPOCYTE-SPECIFIC PROTEIN 4-RELATED; [PF07946] Protein of unknown function (DUF1682)27.550.6466
13 Mapoly0004s0190 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [KOG2602] Predicted cell surface protein homologous to bacterial outer membrane proteins; [PF01103] Surface antigen28.980.6671
14 Mapoly0011s0112 [GO:0046034] ATP metabolic process; [GO:0005524] ATP binding; [3.6.3.14] H(+)-transporting two-sector ATPase.; [K02145] V-type H+-transporting ATPase subunit A [EC:3.6.3.14]; [PF00006] ATP synthase alpha/beta family, nucleotide-binding domain; [GO:0015992] proton transport; [PTHR15184:SF7] V-TYPE ATP SYNTHASE ALPHA CHAIN; [KOG1352] Vacuolar H+-ATPase V1 sector, subunit A; [GO:0015991] ATP hydrolysis coupled proton transport; [GO:0033178] proton-transporting two-sector ATPase complex, catalytic domain; [GO:0016820] hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; [PF02874] ATP synthase alpha/beta family, beta-barrel domain; [PTHR15184] ATP SYNTHASE; [PF00306] ATP synthase alpha/beta chain, C terminal domain30.000.6778
15 Mapoly0055s0078 [KOG2391] Vacuolar sorting protein/ubiquitin receptor VPS23; [PF05743] UEV domain; [GO:0015031] protein transport; [K12183] ESCRT-I complex subunit TSG101; [PTHR23306] TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED; [PTHR23306:SF3] SUBFAMILY NOT NAMED; [GO:0006464] cellular protein modification process; [PF09454] Vps23 core domain35.160.7082
16 Mapoly0059s0084 [PF04389] Peptidase family M28; [PF02225] PA domain; [KOG2195] Transferrin receptor and related proteins containing the protease-associated (PA) domain; [PTHR10404] N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE; [PF04253] Transferrin receptor-like dimerisation domain38.880.6112
17 Mapoly0102s0023 [GO:0016020] membrane; [PF03254] Xyloglucan fucosyltransferase; [GO:0042546] cell wall biogenesis; [GO:0008107] galactoside 2-alpha-L-fucosyltransferase activity; [PTHR31889] FAMILY NOT NAMED42.450.5898
18 Mapoly0105s0013 [PTHR10357] ALPHA-AMYLASE; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [GO:0003824] catalytic activity; [KOG0470] 1,4-alpha-glucan branching enzyme/starch branching enzyme II; [GO:0043169] cation binding; [PF00128] Alpha amylase, catalytic domain; [PF02922] Carbohydrate-binding module 48 (Isoamylase N-terminal domain)43.160.6586
19 Mapoly0061s0021 [KOG3978] Predicted membrane protein; [PF10268] Predicted transmembrane protein 161AB44.590.6113
20 Mapoly0001s0235 [PF03407] Nucleotide-diphospho-sugar transferase50.190.6824
21 Mapoly0016s0061 [KOG1605] TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation); [PF03031] NLI interacting factor-like phosphatase; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [GO:0005515] protein binding; [GO:0015031] protein transport; [PTHR12210:SF3] TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 50-RELATED; [PTHR12210] NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED; [GO:0005743] mitochondrial inner membrane51.960.6860
22 Mapoly0117s0045 [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED52.820.6283
23 Mapoly0087s0003 [PTHR31373] FAMILY NOT NAMED; [PF11443] Domain of unknown function (DUF2828)53.890.6642
24 Mapoly0077s0062 [PF04043] Plant invertase/pectin methylesterase inhibitor; [GO:0030599] pectinesterase activity; [PF01095] Pectinesterase; [GO:0004857] enzyme inhibitor activity; [PTHR31707] FAMILY NOT NAMED; [GO:0042545] cell wall modification; [K01051] pectinesterase [EC:3.1.1.11]; [3.1.1.11] Pectinesterase.; [GO:0005618] cell wall54.190.5993
25 Mapoly0096s0015 [PF01734] Patatin-like phospholipase; [KOG4231] Intracellular membrane-bound Ca2+-independent phospholipase A2; [PF12799] Leucine Rich repeats (2 copies); [PTHR24185] FAMILY NOT NAMED; [GO:0006629] lipid metabolic process59.130.6381
26 Mapoly0050s0105 [PF02698] DUF218 domain; [KOG4533] Uncharacterized conserved protein59.510.6052
27 Mapoly0087s0038 [PF04124] Dor1-like family; [PTHR21311] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8; [GO:0017119] Golgi transport complex; [PTHR21311:SF0] SUBFAMILY NOT NAMED; [KOG2069] Golgi transport complex subunit63.640.6598
28 Mapoly0001s0182 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain64.500.6754
29 Mapoly0007s0130 [PTHR11787] RAB GDP-DISSOCIATION INHIBITOR; [KOG4405] GDP dissociation inhibitor; [PF00996] GDP dissociation inhibitor68.540.6576
30 Mapoly0016s0105 [GO:0016021] integral to membrane; [KOG1278] Endosomal membrane proteins, EMP70; [PF02990] Endomembrane protein 70; [PTHR10766] TRANSMEMBRANE 9 SUPERFAMILY PROTEIN68.680.6176
31 Mapoly0059s0091 [PF03901] Alg9-like mannosyltransferase family; [KOG2515] Mannosyltransferase; [PTHR22760] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups; [K03846] alpha-1,2-mannosyltransferase [EC:2.4.1.-]; [2.4.1.-] Hexosyltransferases.69.410.6123
32 Mapoly0031s0110 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF13637] Ankyrin repeats (many copies)69.750.5755
33 Mapoly0125s0018 [K05545] tRNA-dihydrouridine synthase 4 [EC:1.-.-.-]; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PTHR11082:SF5] TRNA-DIHYDROURIDINE SYNTHASE 1; [PF01207] Dihydrouridine synthase (Dus); [KOG2335] tRNA-dihydrouridine synthase; [GO:0008033] tRNA processing; [PTHR11082] TRNA-DIHYDROURIDINE SYNTHASE; [GO:0017150] tRNA dihydrouridine synthase activity; [1.-.-.-] Oxidoreductases.72.000.6126
34 Mapoly0030s0077 [PF13854] Kelch motif; [PF13418] Galactose oxidase, central domain; [PTHR23117] GUANYLATE KINASE-RELATED; [GO:0005515] protein binding; [PF00625] Guanylate kinase; [KOG0707] Guanylate kinase; [2.7.4.8] Guanylate kinase.; [PF01344] Kelch motif; [K00942] guanylate kinase [EC:2.7.4.8]74.460.5925
35 Mapoly0110s0020 -74.830.6044
36 Mapoly0103s0064 [KOG1398] Uncharacterized conserved protein; [PTHR12459:SF1] gb def: k02g10.3.p [caenorhabditis elegans]; [PTHR12459] UNCHARACTERIZED77.070.6291
37 Mapoly0082s0050 [PF04815] Sec23/Sec24 helical domain; [K14006] protein transport protein SEC23; [GO:0008270] zinc ion binding; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [KOG1986] Vesicle coat complex COPII, subunit SEC23; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR11141] PROTEIN TRANSPORT PROTEIN SEC23; [GO:0006888] ER to Golgi vesicle-mediated transport; [PF00626] Gelsolin repeat77.500.6051
38 Mapoly0026s0101 -79.370.5901
39 Mapoly0007s0201 [GO:0006506] GPI anchor biosynthetic process; [PF04987] Phosphatidylinositolglycan class N (PIG-N); [PF01663] Type I phosphodiesterase / nucleotide pyrophosphatase; [KOG2124] Glycosylphosphatidylinositol anchor synthesis protein; [PTHR12250] PHOSPHATIDYLINOSITOL GLYCAN, CLASS N; [GO:0003824] catalytic activity; [GO:0005789] endoplasmic reticulum membrane; [GO:0016740] transferase activity80.270.6398
40 Mapoly0185s0020 [PF05450] Nicastrin; [PTHR31826] FAMILY NOT NAMED; [GO:0016485] protein processing; [GO:0016021] integral to membrane; [KOG2526] Predicted aminopeptidases - M20/M25/M40 family81.290.5877
41 Mapoly0024s0013 [GO:0016758] transferase activity, transferring hexosyl groups; [PF05637] galactosyl transferase GMA12/MNN10 family; [KOG4748] Subunit of Golgi mannosyltransferase complex; [GO:0016021] integral to membrane; [PTHR31311] FAMILY NOT NAMED81.390.5762
42 Mapoly0156s0017 [PF07719] Tetratricopeptide repeat81.880.6724
43 Mapoly0062s0075 [PTHR12103:SF12] PREDICTED: HYPOTHETICAL PROTEIN, PARTIAL; [PTHR12103] CYTOSOLIC PURINE 5-NUCLEOTIDASE-RELATED; [PF05761] 5' nucleotidase family; [KOG2470] Similar to IMP-GMP specific 5'-nucleotidase82.060.6589
44 Mapoly0169s0016 [PF13531] Bacterial extracellular solute-binding protein; [GO:0008272] sulfate transport; [GO:0015419] sulfate transmembrane-transporting ATPase activity; [PTHR30368] SULFATE-BINDING PROTEIN84.250.5622
45 Mapoly0003s0073 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED; [PF09320] Domain of unknown function (DUF1977)85.090.6679
46 Mapoly0021s0032 -89.480.6697
47 Mapoly0077s0007 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG1330] Sugar transporter/spinster transmembrane protein; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily92.560.6165
48 Mapoly0166s0015 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PF13640] 2OG-Fe(II) oxygenase superfamily; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2]93.240.5655
49 Mapoly0045s0043 -94.680.6693
50 Mapoly0015s0016 [PTHR31923] FAMILY NOT NAMED; [PF03909] BSD domain97.300.5330
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