Guide Gene

Gene ID
Mapoly0055s0078
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG2391] Vacuolar sorting protein/ubiquitin receptor VPS23; [PF05743] UEV domain; [GO:0015031] protein transport; [K12183] ESCRT-I complex subunit TSG101; [PTHR23306] TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED; [PTHR23306:SF3] SUBFAMILY NOT NAMED; [GO:0006464] cellular protein modification process; [PF09454] Vps23 core domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0055s0078 [KOG2391] Vacuolar sorting protein/ubiquitin receptor VPS23; [PF05743] UEV domain; [GO:0015031] protein transport; [K12183] ESCRT-I complex subunit TSG101; [PTHR23306] TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED; [PTHR23306:SF3] SUBFAMILY NOT NAMED; [GO:0006464] cellular protein modification process; [PF09454] Vps23 core domain 0.00 1.0000
1 Mapoly0003s0073 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED; [PF09320] Domain of unknown function (DUF1977)1.410.8651
2 Mapoly0108s0027 [PTHR10110] SODIUM/HYDROGEN EXCHANGER; [KOG1965] Sodium/hydrogen exchanger protein; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family2.000.8577
3 Mapoly0001s0142 [PF08238] Sel1 repeat; [PTHR12298] PCDC2 (PROGRAMMED CELL DEATH PROTEIN 2)-RELATED; [PF01753] MYND finger3.740.8190
4 Mapoly0108s0005 [KOG2666] UDP-glucose/GDP-mannose dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03720] UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; [PF03721] UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; [PTHR11374:SF3] UDP-GLUCOSE 6-DEHYDROGENASE; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [1.1.1.22] UDP-glucose 6-dehydrogenase.; [GO:0003979] UDP-glucose 6-dehydrogenase activity; [GO:0051287] NAD binding; [PTHR11374] UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE; [PF00984] UDP-glucose/GDP-mannose dehydrogenase family, central domain; [K00012] UDPglucose 6-dehydrogenase [EC:1.1.1.22]4.900.8430
5 Mapoly0088s0059 [PF07714] Protein tyrosine kinase; [KOG0192] Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs; [PTHR23257] SERINE-THREONINE PROTEIN KINASE; [GO:0004672] protein kinase activity; [GO:0004871] signal transducer activity; [PF13426] PAS domain; [GO:0007165] signal transduction; [GO:0006468] protein phosphorylation5.480.8261
6 Mapoly0064s0109 [GO:0016192] vesicle-mediated transport; [PTHR21136] SNARE PROTEINS; [GO:0016021] integral to membrane; [K08515] vesicle-associated membrane protein 7; [PF00957] Synaptobrevin; [PF13774] Regulated-SNARE-like domain; [KOG0859] Synaptobrevin/VAMP-like protein5.660.7974
7 Mapoly0055s0011 [PTHR10687:SF2] SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN; [GO:0016021] integral to membrane; [GO:0015031] protein transport; [PF04144] SCAMP family; [PTHR10687] SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN (SCAMP); [KOG3088] Secretory carrier membrane protein6.000.8499
8 Mapoly0071s0058 [GO:0016020] membrane; [GO:0003333] amino acid transmembrane transport; [KOG1289] Amino acid transporters; [PF13520] Amino acid permease; [PTHR11785] AMINO ACID TRANSPORTER; [GO:0015171] amino acid transmembrane transporter activity8.490.8231
9 Mapoly0036s0047 [GO:0016020] membrane; [GO:0005515] protein binding; [KOG0812] SNARE protein SED5/Syntaxin 5; [PTHR19957] SYNTAXIN; [PF00804] Syntaxin; [PTHR19957:SF3] SYNTAXIN 5; [K08490] syntaxin 5; [PF05739] SNARE domain9.000.8520
10 Mapoly0130s0019 [GO:0005737] cytoplasm; [PF02544] 3-oxo-5-alpha-steroid 4-dehydrogenase; [GO:0016021] integral to membrane; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [PTHR14624] DFG10 PROTEIN; [KOG1640] Predicted steroid reductase; [GO:0006629] lipid metabolic process10.390.8275
11 Mapoly1179s0001 [GO:0055114] oxidation-reduction process; [PF03720] UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; [PTHR11374:SF3] UDP-GLUCOSE 6-DEHYDROGENASE; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0003979] UDP-glucose 6-dehydrogenase activity; [GO:0051287] NAD binding; [PTHR11374] UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE; [PF00984] UDP-glucose/GDP-mannose dehydrogenase family, central domain11.400.8033
12 Mapoly0043s0080 [PTHR12741] LYST-INTERACTING PROTEIN LIP5 (DOPAMINE RESPONSIVE PROTEIN DRG-1); [K12199] vacuolar protein sorting-associated protein VTA1; [KOG0917] Uncharacterized conserved protein; [PF04652] Vta1 like11.750.7789
13 Mapoly0187s0013 [K08488] syntaxin 7; [PTHR19957:SF38] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR19957] SYNTAXIN; [PF14523] Syntaxin-like protein; [KOG0811] SNARE protein PEP12/VAM3/Syntaxin 7/Syntaxin 17; [PF05739] SNARE domain12.000.8324
14 Mapoly0016s0169 -13.490.8421
15 Mapoly0072s0071 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1371] UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE14.070.8123
16 Mapoly0001s0235 [PF03407] Nucleotide-diphospho-sugar transferase15.490.8114
17 Mapoly0057s0007 [GO:0010215] cellulose microfibril organization; [PF04833] COBRA-like protein; [GO:0031225] anchored to membrane; [GO:0016049] cell growth; [PTHR31673] FAMILY NOT NAMED16.970.8132
18 Mapoly0144s0014 [K01613] phosphatidylserine decarboxylase [EC:4.1.1.65]; [PTHR10067] PHOSPHATIDYLSERINE DECARBOXYLASE; [GO:0008654] phospholipid biosynthetic process; [4.1.1.65] Phosphatidylserine decarboxylase.; [GO:0004609] phosphatidylserine decarboxylase activity; [PF02666] Phosphatidylserine decarboxylase; [KOG2420] Phosphatidylserine decarboxylase17.180.8437
19 Mapoly0037s0109 [KOG0637] Sucrose transporter and related proteins; [PF13347] MFS/sugar transport protein; [PTHR19432] SUGAR TRANSPORTER17.350.7839
20 Mapoly0156s0017 [PF07719] Tetratricopeptide repeat18.030.8227
21 Mapoly0021s0032 -18.170.8247
22 Mapoly0042s0058 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR12802] SWI/SNF COMPLEX-RELATED19.440.7993
23 Mapoly0007s0130 [PTHR11787] RAB GDP-DISSOCIATION INHIBITOR; [KOG4405] GDP dissociation inhibitor; [PF00996] GDP dissociation inhibitor20.780.7787
24 Mapoly0510s0002 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED22.450.7173
25 Mapoly0038s0011 [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED24.740.7901
26 Mapoly0071s0010 [GO:0016020] membrane; [GO:0030001] metal ion transport; [KOG2662] Magnesium transporters: CorA family; [PF01544] CorA-like Mg2+ transporter protein; [GO:0015095] magnesium ion transmembrane transporter activity; [GO:0046873] metal ion transmembrane transporter activity; [GO:0055085] transmembrane transport; [GO:0015693] magnesium ion transport; [PTHR13890] RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL24.820.7236
27 Mapoly0003s0310 [PF13839] GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p; [PTHR13533] FAMILY NOT NAMED28.670.7345
28 Mapoly0108s0006 [GO:0055114] oxidation-reduction process; [PF03721] UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; [PTHR11374:SF3] UDP-GLUCOSE 6-DEHYDROGENASE; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0003979] UDP-glucose 6-dehydrogenase activity; [GO:0051287] NAD binding; [PTHR11374] UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE30.820.7543
29 Mapoly0048s0024 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE33.230.7673
30 Mapoly0080s0045 [GO:0008565] protein transporter activity; [GO:0016021] integral to membrane; [GO:0015031] protein transport; [PTHR12443:SF9] SUBFAMILY NOT NAMED; [K12275] translocation protein SEC62; [PTHR12443] FAMILY NOT NAMED; [PF03839] Translocation protein Sec6233.540.7791
31 Mapoly0024s0050 [PF09423] PhoD-like phosphatase33.630.7990
32 Mapoly0070s0026 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED34.790.8097
33 Mapoly0061s0105 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN34.910.8058
34 Mapoly0005s0224 [3.2.2.21] DNA-3-methyladenine glycosylase II.; [GO:0006284] base-excision repair; [KOG1918] 3-methyladenine DNA glycosidase; [PTHR10242] N-GLYCOSYLASE/DNA LYASE; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K01247] DNA-3-methyladenine glycosylase II [EC:3.2.2.21]; [PTHR10242:SF0] N-GLYCOSYLASE/DNA LYASE35.140.8118
35 Mapoly0020s0029 [KOG1985] Vesicle coat complex COPII, subunit SEC24/subunit SFB2; [PF04815] Sec23/Sec24 helical domain; [GO:0008270] zinc ion binding; [PF08033] Sec23/Sec24 beta-sandwich domain; [PF04811] Sec23/Sec24 trunk domain; [GO:0006886] intracellular protein transport; [PF04810] Sec23/Sec24 zinc finger; [GO:0030127] COPII vesicle coat; [PTHR13803] SEC24-RELATED PROTEIN; [GO:0006888] ER to Golgi vesicle-mediated transport35.160.7082
36 Mapoly0046s0017 [PTHR14237] MOLYBDOPTERIN COFACTOR SULFURASE (MOSC); [GO:0008152] metabolic process; [PF00266] Aminotransferase class-V35.500.7909
37 Mapoly0001s0182 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain37.950.7860
38 Mapoly0064s0081 [GO:0008270] zinc ion binding; [PF12906] RING-variant domain; [PTHR23012] MEMBRANE ASSOCIATED RING FINGER38.500.7868
39 Mapoly0085s0047 -39.600.7786
40 Mapoly0086s0043 [PTHR24412] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif40.060.8140
41 Mapoly0007s0157 [4.2.2.2] Pectate lyase.; [K01728] pectate lyase [EC:4.2.2.2]; [PF00544] Pectate lyase; [PTHR31683] FAMILY NOT NAMED41.710.7990
42 Mapoly0043s0079 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family42.250.8129
43 Mapoly0059s0041 -42.770.7980
44 Mapoly0031s0161 [KOG4029] Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1; [PF14215] bHLH-MYC and R2R3-MYB transcription factors N-terminal; [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR11514:SF9] GL3 (GLABRA 3), TRANSCRIPTION FACTOR; [PTHR11514] MYC42.900.7125
45 Mapoly0008s0159 [GO:0006355] regulation of transcription, DNA-dependent; [K13424] WRKY transcription factor 33; [PTHR31221] FAMILY NOT NAMED; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF03106] WRKY DNA -binding domain43.470.7852
46 Mapoly0086s0086 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN44.500.7736
47 Mapoly0043s0142 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE45.300.7763
48 Mapoly0049s0068 -45.430.7162
49 Mapoly0001s0375 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [KOG1198] Zinc-binding oxidoreductase; [PF13602] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED45.960.7972
50 Mapoly0001s0080 [PF00415] Regulator of chromosome condensation (RCC1) repeat; [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF13540] Regulator of chromosome condensation (RCC1) repeat; [PTHR22870:SF26] UVB-RESISTANCE PROTEIN UVR8-RELATED; [KOG1427] Uncharacterized conserved protein, contains RCC1 domain46.310.7759
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