Guide Gene

Gene ID
Mapoly0015s0122
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [PTHR11680:SF1] SERINE HYDROXYMETHYLTRANSFERASE; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0015s0122 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [PTHR11680:SF1] SERINE HYDROXYMETHYLTRANSFERASE; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE 0.00 1.0000
1 Mapoly0001s0436 [2.6.1.44] Alanine--glyoxylate transaminase.; [K00830] alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]; [GO:0008152] metabolic process; [2.6.1.45] Serine--glyoxylate transaminase.; [PTHR21152] AMINOTRANSFERASE CLASS V; [2.6.1.51] Serine--pyruvate transaminase.; [KOG2862] Alanine-glyoxylate aminotransferase AGT1; [PF00266] Aminotransferase class-V1.730.9304
2 Mapoly0125s0005 [1.11.1.6] Catalase.; [K03781] catalase [EC:1.11.1.6]; [GO:0055114] oxidation-reduction process; [PTHR11465:SF3] CATALASE; [PF00199] Catalase; [PF06628] Catalase-related immune-responsive; [GO:0004096] catalase activity; [KOG0047] Catalase; [PTHR11465] CATALASE; [GO:0020037] heme binding; [GO:0006979] response to oxidative stress1.730.9210
3 Mapoly0029s0125 [PF01070] FMN-dependent dehydrogenase; [K11517] (S)-2-hydroxy-acid oxidase [EC:1.1.3.15]; [PTHR10578] (S)-2-HYDROXY-ACID OXIDASE-RELATED; [1.1.3.15] (S)-2-hydroxy-acid oxidase.; [GO:0016491] oxidoreductase activity; [KOG0538] Glycolate oxidase2.830.9217
4 Mapoly0053s0046 [PF00484] Carbonic anhydrase; [KOG1578] Predicted carbonic anhydrase involved in protection against oxidative damage; [4.2.1.1] Carbonate dehydratase.; [GO:0008270] zinc ion binding; [GO:0004089] carbonate dehydratase activity; [K01673] carbonic anhydrase [EC:4.2.1.1]; [PTHR11002] FAMILY NOT NAMED4.000.9203
5 Mapoly0068s0042 [1.4.4.2] Glycine dehydrogenase (decarboxylating).; [GO:0055114] oxidation-reduction process; [K00281] glycine dehydrogenase [EC:1.4.4.2]; [KOG2040] Glycine dehydrogenase (decarboxylating); [GO:0006546] glycine catabolic process; [GO:0004375] glycine dehydrogenase (decarboxylating) activity; [PF02347] Glycine cleavage system P-protein; [PTHR11773] GLYCINE DEHYDROGENASE4.900.8944
6 Mapoly0119s0030 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]5.200.8990
7 Mapoly0015s0044 [PTHR10996:SF22] HYDROXYPYRUVATE REDUCTASE; [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain6.320.9146
8 Mapoly0023s0027 [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [PF04898] Glutamate synthase central domain; [GO:0006537] glutamate biosynthetic process; [GO:0055114] oxidation-reduction process; [GO:0006807] nitrogen compound metabolic process; [GO:0015930] glutamate synthase activity; [1.4.7.1] Glutamate synthase (ferredoxin).; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF01645] Conserved region in glutamate synthase; [KOG0399] Glutamate synthase; [PF00310] Glutamine amidotransferases class-II; [GO:0016638] oxidoreductase activity, acting on the CH-NH2 group of donors; [K00284] glutamate synthase (ferredoxin) [EC:1.4.7.1]; [PF01493] GXGXG motif6.320.8948
9 Mapoly0015s0129 [PTHR11540:SF9] MALATE DEHYDROGENASE, CYTOPLASMIC; [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [KOG1494] NAD-dependent malate dehydrogenase; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11540] MALATE AND LACTATE DEHYDROGENASE; [GO:0044262] cellular carbohydrate metabolic process; [1.1.1.37] Malate dehydrogenase.; [K00026] malate dehydrogenase [EC:1.1.1.37]6.480.9104
10 Mapoly0021s0050 [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF13857] Ankyrin repeats (many copies); [PF13962] Domain of unknown function; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN7.350.8337
11 Mapoly0052s0062 [PF13738] Pyridine nucleotide-disulphide oxidoreductase; [PTHR23023] DIMETHYLANILINE MONOOXYGENASE8.000.8843
12 Mapoly0174s0014 [PTHR11772] ASPARAGINE SYNTHETASE; [KOG0571] Asparagine synthase (glutamine-hydrolyzing); [K01953] asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]; [PTHR11772:SF2] gb def: unknown protein [mesorhizobium loti]; [GO:0008152] metabolic process; [GO:0006529] asparagine biosynthetic process; [PF13537] Glutamine amidotransferase domain; [PF00733] Asparagine synthase; [6.3.5.4] Asparagine synthase (glutamine-hydrolyzing).; [GO:0004066] asparagine synthase (glutamine-hydrolyzing) activity11.180.7886
13 Mapoly0047s0072 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family12.490.8500
14 Mapoly0026s0078 [GO:0016020] membrane; [PF00571] CBS domain; [KOG0474] Cl- channel CLC-7 and related proteins (CLC superfamily); [GO:0006821] chloride transport; [PF00654] Voltage gated chloride channel; [GO:0055085] transmembrane transport; [GO:0005247] voltage-gated chloride channel activity; [GO:0030554] adenyl nucleotide binding; [PTHR11689] CHLORIDE CHANNEL12.650.8491
15 Mapoly0022s0132 [GO:0005524] ATP binding; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR32429] FAMILY NOT NAMED13.270.9048
16 Mapoly0006s0049 [K02437] glycine cleavage system H protein; [PF01597] Glycine cleavage H-protein; [PTHR11715] GLYCINE CLEAVAGE SYSTEM H PROTEIN; [KOG3373] Glycine cleavage system H protein (lipoate-binding)14.000.9058
17 Mapoly0114s0037 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF25] NAI1, DNA BINDING / TRANSCRIPTION FACTOR; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS18.970.8533
18 Mapoly0043s0058 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE19.340.8540
19 Mapoly0006s0055 [GO:0009523] photosystem II; [GO:0009654] oxygen evolving complex; [GO:0042651] thylakoid membrane; [PF04725] Photosystem II 10 kDa polypeptide PsbR; [GO:0015979] photosynthesis20.170.8945
20 Mapoly0039s0079 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family21.820.8887
21 Mapoly0006s0167 [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN23.620.8019
22 Mapoly0005s0210 [GO:0042602] riboflavin reductase (NADPH) activity; [GO:0055114] oxidation-reduction process; [PF00258] Flavodoxin; [GO:0016491] oxidoreductase activity; [PF01613] Flavin reductase like domain; [PTHR32145] FAMILY NOT NAMED; [GO:0010181] FMN binding26.460.7655
23 Mapoly0164s0015 [GO:0015035] protein disulfide oxidoreductase activity; [KOG0910] Thioredoxin-like protein; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [PTHR10438] THIOREDOXIN27.460.8921
24 Mapoly0011s0071 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]27.500.8608
25 Mapoly0023s0052 [K00360] nitrate reductase (NADH) [EC:1.7.1.1]; [KOG0535] Sulfite oxidase, molybdopterin-binding component; [PTHR19370] NADH-CYTOCHROME B5 REDUCTASE; [PF03404] Mo-co oxidoreductase dimerisation domain; [GO:0055114] oxidation-reduction process; [PF00175] Oxidoreductase NAD-binding domain; [1.7.1.1] Nitrate reductase (NADH).; [GO:0016491] oxidoreductase activity; [GO:0009055] electron carrier activity; [PF00970] Oxidoreductase FAD-binding domain; [GO:0020037] heme binding; [GO:0030151] molybdenum ion binding; [PF00174] Oxidoreductase molybdopterin binding domain; [PF00173] Cytochrome b5-like Heme/Steroid binding domain28.710.7969
26 Mapoly0074s0006 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF07983] X8 domain; [PF00332] Glycosyl hydrolases family 1728.840.7967
27 Mapoly0014s0057 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily29.700.8237
28 Mapoly0091s0072 [GO:0000160] phosphorelay signal transduction system; [K14490] histidine-containing phosphotransfer peotein; [GO:0004871] signal transducer activity; [KOG4747] Two-component phosphorelay intermediate involved in MAP kinase cascade regulation; [PF01627] Hpt domain30.500.8238
29 Mapoly0057s0083 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 231.220.8643
30 Mapoly0119s0031 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]31.670.8759
31 Mapoly0058s0050 [1.14.19.-] With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water.; [GO:0055114] oxidation-reduction process; [GO:0016717] oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; [PTHR32100] FAMILY NOT NAMED; [PF00487] Fatty acid desaturase; [K10257] omega-3 fatty acid desaturase (delta-15 desaturase) [EC:1.14.19.-]; [GO:0006629] lipid metabolic process; [PF11960] Domain of unknown function (DUF3474)32.860.7954
32 Mapoly0006s0116 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain33.500.7575
33 Mapoly0047s0028 [GO:0050660] flavin adenine dinucleotide binding; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [1.8.1.4] Dihydrolipoyl dehydrogenase.; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [K00382] dihydrolipoamide dehydrogenase [EC:1.8.1.4]; [GO:0016491] oxidoreductase activity; [PF02852] Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; [KOG1335] Dihydrolipoamide dehydrogenase; [PTHR22912:SF20] DIHYDROLIPOAMIDE DEHYDROGENASE-RELATED; [PF07992] Pyridine nucleotide-disulphide oxidoreductase33.760.8511
34 Mapoly0088s0024 [PF04873] Ethylene insensitive 3; [K14514] ethylene-insensitive protein 335.710.8158
35 Mapoly0041s0090 [2.6.1.2] Alanine transaminase.; [K00814] alanine transaminase [EC:2.6.1.2]; [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [PF00155] Aminotransferase class I and II; [KOG0258] Alanine aminotransferase; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED36.030.8306
36 Mapoly0125s0006 [PF02733] Dak1 domain; [GO:0004371] glycerone kinase activity; [GO:0006071] glycerol metabolic process; [PF02734] DAK2 domain; [KOG2426] Dihydroxyacetone kinase/glycerone kinase36.220.7712
37 Mapoly0007s0031 -37.500.8178
38 Mapoly0199s0014 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 237.500.8738
39 Mapoly0083s0021 [PF10551] MULE transposase domain37.950.7733
40 Mapoly0053s0082 [GO:0006096] glycolysis; [PF00274] Fructose-bisphosphate aldolase class-I; [K01623] fructose-bisphosphate aldolase, class I [EC:4.1.2.13]; [PTHR11627] FRUCTOSE-BISPHOSPHATE ALDOLASE; [GO:0004332] fructose-bisphosphate aldolase activity; [4.1.2.13] Fructose-bisphosphate aldolase.; [KOG1557] Fructose-biphosphate aldolase38.600.7778
41 Mapoly0129s0024 [GO:0005737] cytoplasm; [PF08669] Glycine cleavage T-protein C-terminal barrel domain; [GO:0004047] aminomethyltransferase activity; [PTHR13847:SF5] AMINOMETHYLTRANSFERASE; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG2770] Aminomethyl transferase; [GO:0006546] glycine catabolic process; [2.1.2.10] Aminomethyltransferase.; [K00605] aminomethyltransferase [EC:2.1.2.10]; [PF01571] Aminomethyltransferase folate-binding domain38.670.8680
42 Mapoly0083s0028 [GO:0055114] oxidation-reduction process; [GO:0005515] protein binding; [GO:0016702] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; [PTHR11771] LIPOXYGENASE; [PF01477] PLAT/LH2 domain; [GO:0046872] metal ion binding; [PF00305] Lipoxygenase39.500.8353
43 Mapoly0094s0072 [KOG0645] WD40 repeat protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat41.640.6310
44 Mapoly0061s0013 [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0015078] hydrogen ion transmembrane transporter activity; [GO:0015986] ATP synthesis coupled proton transport; [PF00430] ATP synthase B/B' CF(0); [GO:0045263] proton-transporting ATP synthase complex, coupling factor F(o); [K02109] F-type H+-transporting ATPase subunit b [EC:3.6.3.14]44.670.8879
45 Mapoly0060s0036 [PTHR31984] FAMILY NOT NAMED; [PF02622] Uncharacterized ACR, COG167844.720.7520
46 Mapoly0013s0012 [PTHR11624] DEHYDROGENASE RELATED; [K00615] transketolase [EC:2.2.1.1]; [PF00456] Transketolase, thiamine diphosphate binding domain; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [PF02780] Transketolase, C-terminal domain; [2.2.1.1] Transketolase.; [KOG0523] Transketolase45.830.8206
47 Mapoly0124s0034 [GO:0004222] metalloendopeptidase activity; [K07042] probable rRNA maturation factor; [PTHR10000] PHOSPHOSERINE PHOSPHATASE; [GO:0006364] rRNA processing; [PF08282] haloacid dehalogenase-like hydrolase; [PF02130] Uncharacterized protein family UPF005446.370.8083
48 Mapoly0082s0060 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase47.370.8682
49 Mapoly0024s0059 [PTHR10357] ALPHA-AMYLASE; [GO:0004556] alpha-amylase activity; [GO:0005975] carbohydrate metabolic process; [PF07821] Alpha-amylase C-terminal beta-sheet domain; [KOG0471] Alpha-amylase; [GO:0003824] catalytic activity; [GO:0043169] cation binding; [GO:0005509] calcium ion binding; [PF00128] Alpha amylase, catalytic domain48.060.8463
50 Mapoly0024s0029 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN49.020.8637
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