Guide Gene

Gene ID
Mapoly0039s0079
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family

Coexpressed Gene List

Search : Show :

Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0039s0079 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 0.00 1.0000
1 Mapoly0057s0005 [K02355] elongation factor EF-G [EC:3.6.5.3]; [PF14492] Elongation Factor G, domain II; [3.6.5.3] Protein-synthesizing GTPase.; [PF00009] Elongation factor Tu GTP binding domain; [KOG0465] Mitochondrial elongation factor; [PF00679] Elongation factor G C-terminus; [PTHR23115:SF13] TRANSLATION ELONGATION FACTOR G; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [PF03764] Elongation factor G, domain IV; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 21.410.9370
2 Mapoly0023s0027 [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [PF04898] Glutamate synthase central domain; [GO:0006537] glutamate biosynthetic process; [GO:0055114] oxidation-reduction process; [GO:0006807] nitrogen compound metabolic process; [GO:0015930] glutamate synthase activity; [1.4.7.1] Glutamate synthase (ferredoxin).; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF01645] Conserved region in glutamate synthase; [KOG0399] Glutamate synthase; [PF00310] Glutamine amidotransferases class-II; [GO:0016638] oxidoreductase activity, acting on the CH-NH2 group of donors; [K00284] glutamate synthase (ferredoxin) [EC:1.4.7.1]; [PF01493] GXGXG motif2.830.9146
3 Mapoly0011s0046 [GO:0000287] magnesium ion binding; [GO:0016829] lyase activity; [PF03936] Terpene synthase family, metal binding domain; [GO:0010333] terpene synthase activity5.000.8946
4 Mapoly0035s0114 [PTHR16254] POTASSIUM/PROTON ANTIPORTER-RELATED; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0006813] potassium ion transport; [GO:0055085] transmembrane transport; [PF02254] TrkA-N domain; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family5.290.9037
5 Mapoly0001s0436 [2.6.1.44] Alanine--glyoxylate transaminase.; [K00830] alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]; [GO:0008152] metabolic process; [2.6.1.45] Serine--glyoxylate transaminase.; [PTHR21152] AMINOTRANSFERASE CLASS V; [2.6.1.51] Serine--pyruvate transaminase.; [KOG2862] Alanine-glyoxylate aminotransferase AGT1; [PF00266] Aminotransferase class-V5.480.9213
6 Mapoly0191s0001 [GO:0003723] RNA binding; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005515] protein binding; [PTHR11741] ELONGATION FACTOR TS; [PTHR11741:SF1] gb def: putative mitochondrial elongation factor ts [schizosaccharomyces pombe]; [PF00575] S1 RNA binding domain; [GO:0005622] intracellular; [PF00627] UBA/TS-N domain; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt8.490.9192
7 Mapoly0029s0125 [PF01070] FMN-dependent dehydrogenase; [K11517] (S)-2-hydroxy-acid oxidase [EC:1.1.3.15]; [PTHR10578] (S)-2-HYDROXY-ACID OXIDASE-RELATED; [1.1.3.15] (S)-2-hydroxy-acid oxidase.; [GO:0016491] oxidoreductase activity; [KOG0538] Glycolate oxidase8.770.9107
8 Mapoly0024s0048 [3.1.3.37] Sedoheptulose-bisphosphatase.; [K01100] sedoheptulose-bisphosphatase [EC:3.1.3.37]; [GO:0005975] carbohydrate metabolic process; [GO:0042132] fructose 1,6-bisphosphate 1-phosphatase activity; [PTHR11556] FRUCTOSE-1,6-BISPHOSPHATASE-RELATED; [PTHR11556:SF2] SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLAST; [GO:0042578] phosphoric ester hydrolase activity; [PF00316] Fructose-1-6-bisphosphatase; [KOG1458] Fructose-1,6-bisphosphatase8.830.9236
9 Mapoly0061s0013 [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0015078] hydrogen ion transmembrane transporter activity; [GO:0015986] ATP synthesis coupled proton transport; [PF00430] ATP synthase B/B' CF(0); [GO:0045263] proton-transporting ATP synthase complex, coupling factor F(o); [K02109] F-type H+-transporting ATPase subunit b [EC:3.6.3.14]8.830.9317
10 Mapoly0156s0007 [PF00072] Response regulator receiver domain; [PF00249] Myb-like DNA-binding domain; [PTHR31312] FAMILY NOT NAMED; [GO:0000160] phosphorelay signal transduction system; [GO:0003682] chromatin binding9.110.8667
11 Mapoly0014s0058 [PF13460] NADH(P)-binding; [KOG1430] C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE9.170.9213
12 Mapoly0034s0131 -12.170.8431
13 Mapoly0022s0132 [GO:0005524] ATP binding; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR32429] FAMILY NOT NAMED13.040.9109
14 Mapoly0016s0134 [GO:0016857] racemase and epimerase activity, acting on carbohydrates and derivatives; [5.1.3.1] Ribulose-phosphate 3-epimerase.; [PTHR11749] RIBULOSE-5-PHOSPHATE-3-EPIMERASE; [PF00834] Ribulose-phosphate 3 epimerase family; [GO:0005975] carbohydrate metabolic process; [K01783] ribulose-phosphate 3-epimerase [EC:5.1.3.1]; [KOG3111] D-ribulose-5-phosphate 3-epimerase15.430.9174
15 Mapoly0039s0077 [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PF08152] GUCT (NUC152) domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding16.370.8743
16 Mapoly0010s0206 [GO:0005515] protein binding; [PTHR13833:SF13] SUBFAMILY NOT NAMED; [PTHR13833] FAMILY NOT NAMED; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase; [PF13905] Thioredoxin-like; [PF01436] NHL repeat16.490.9021
17 Mapoly0216s0007 [KOG0149] Predicted RNA-binding protein SEB4 (RRM superfamily); [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)20.350.8143
18 Mapoly0013s0084 [PF02225] PA domain; [GO:0004252] serine-type endopeptidase activity; [PF00082] Subtilase family; [PF05922] Peptidase inhibitor I9; [GO:0006508] proteolysis; [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN21.680.8625
19 Mapoly0015s0122 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [PTHR11680:SF1] SERINE HYDROXYMETHYLTRANSFERASE; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE21.820.8887
20 Mapoly0129s0024 [GO:0005737] cytoplasm; [PF08669] Glycine cleavage T-protein C-terminal barrel domain; [GO:0004047] aminomethyltransferase activity; [PTHR13847:SF5] AMINOMETHYLTRANSFERASE; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG2770] Aminomethyl transferase; [GO:0006546] glycine catabolic process; [2.1.2.10] Aminomethyltransferase.; [K00605] aminomethyltransferase [EC:2.1.2.10]; [PF01571] Aminomethyltransferase folate-binding domain21.910.8989
21 Mapoly0038s0107 [KOG2099] Glycogen phosphorylase; [PTHR11468:SF3] SUGAR PHOSPHORYLASE-RELATED; [2.4.1.1] Glycogen phosphorylase.; [GO:0005975] carbohydrate metabolic process; [K00688] starch phosphorylase [EC:2.4.1.1]; [PF00343] Carbohydrate phosphorylase; [PTHR11468] GLYCOGEN PHOSPHORYLASE; [GO:0008184] glycogen phosphorylase activity23.370.8268
22 Mapoly0006s0050 [KOG1662] Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5; [PTHR11910:SF1] ATP SYNTHASE DELTA CHAIN; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [PTHR11910] ATP SYNTHASE DELTA CHAIN; [GO:0015986] ATP synthesis coupled proton transport; [K02113] F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]; [PF00213] ATP synthase delta (OSCP) subunit24.190.9122
23 Mapoly0056s0110 [PF00581] Rhodanese-like domain25.790.8884
24 Mapoly0008s0189 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [K02988] small subunit ribosomal protein S5; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain26.250.9080
25 Mapoly0114s0051 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]28.250.8980
26 Mapoly0050s0043 [3.6.3.6] Proton-exporting ATPase.; [K01535] H+-transporting ATPase [EC:3.6.3.6]; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0205] Plasma membrane H+-transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase28.860.8562
27 Mapoly0119s0031 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]28.930.8941
28 Mapoly0143s0011 [PTHR25040] FAMILY NOT NAMED; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR25040:SF70] SUBFAMILY NOT NAMED28.980.8360
29 Mapoly0043s0110 [GO:0009512] cytochrome b6f complex; [PF08041] PetM family of cytochrome b6f complex subunit 729.190.9095
30 Mapoly0199s0013 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 229.560.8994
31 Mapoly0055s0098 [PTHR12363] TRANSPORTIN 3 AND IMPORTIN 13; [KOG2081] Nuclear transport regulator; [PF08389] Exportin 1-like protein29.900.7765
32 Mapoly0082s0023 [PTHR19370] NADH-CYTOCHROME B5 REDUCTASE; [K02639] ferredoxin; [GO:0009055] electron carrier activity; [PF00111] 2Fe-2S iron-sulfur cluster binding domain; [GO:0051536] iron-sulfur cluster binding29.930.8929
33 Mapoly0179s0016 [PTHR31218] FAMILY NOT NAMED32.860.8789
34 Mapoly0135s0004 [PTHR32060] FAMILY NOT NAMED; [PF03572] Peptidase family S41; [GO:0008236] serine-type peptidase activity; [GO:0005515] protein binding; [PF13180] PDZ domain; [GO:0006508] proteolysis; [PTHR32060:SF0] SUBFAMILY NOT NAMED33.000.7486
35 Mapoly0133s0008 [KOG0610] Putative serine/threonine protein kinase; [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [K08282] non-specific serine/threonine protein kinase [EC:2.7.11.1]; [GO:0004672] protein kinase activity; [GO:0004871] signal transducer activity; [PF13426] PAS domain; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0007165] signal transduction; [GO:0006468] protein phosphorylation; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE33.110.7849
36 Mapoly0015s0044 [PTHR10996:SF22] HYDROXYPYRUVATE REDUCTASE; [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain34.320.8862
37 Mapoly0011s0071 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]34.470.8743
38 Mapoly0068s0042 [1.4.4.2] Glycine dehydrogenase (decarboxylating).; [GO:0055114] oxidation-reduction process; [K00281] glycine dehydrogenase [EC:1.4.4.2]; [KOG2040] Glycine dehydrogenase (decarboxylating); [GO:0006546] glycine catabolic process; [GO:0004375] glycine dehydrogenase (decarboxylating) activity; [PF02347] Glycine cleavage system P-protein; [PTHR11773] GLYCINE DEHYDROGENASE34.500.8357
39 Mapoly0009s0197 [GO:0005524] ATP binding; [PTHR11584:SF316] SIMILAR TO PHOSPHATIDYLETHANOLAMINE METHYLTRANSFERASE PUTATIVE UNCHARACTERIZED; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0594] Protein kinase PCTAIRE and related kinases; [PTHR11584] SERINE/THREONINE PROTEIN KINASE35.200.8765
40 Mapoly0090s0063 [GO:0005840] ribosome; [PF01165] Ribosomal protein S21; [PTHR21109:SF0] SUBFAMILY NOT NAMED; [PTHR21109] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation35.280.9023
41 Mapoly0038s0054 [GO:0016020] membrane; [K08905] photosystem I subunit V; [PF01241] Photosystem I psaG / psaK; [GO:0015979] photosynthesis; [GO:0009522] photosystem I35.410.8978
42 Mapoly0071s0038 [GO:0005840] ribosome; [K02935] large subunit ribosomal protein L7/L12; [PTHR11809] RIBOSOMAL PROTEIN L7/L12; [GO:0003735] structural constituent of ribosome; [KOG1715] Mitochondrial/chloroplast ribosomal protein L12; [GO:0005622] intracellular; [PF00542] Ribosomal protein L7/L12 C-terminal domain; [GO:0006412] translation36.180.9009
43 Mapoly0057s0083 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 236.370.8804
44 Mapoly0114s0050 [PTHR31262] FAMILY NOT NAMED; [PF00101] Ribulose bisphosphate carboxylase, small chain36.520.8927
45 Mapoly0083s0047 [GO:0009523] photosystem II; [GO:0016021] integral to membrane; [GO:0030145] manganese ion binding; [K02723] photosystem II PsbY protein; [PF06298] Photosystem II protein Y (PsbY); [GO:0015979] photosynthesis38.540.8894
46 Mapoly0012s0175 [GO:0005524] ATP binding; [2.7.1.19] Phosphoribulokinase.; [K00855] phosphoribulokinase [EC:2.7.1.19]; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [PTHR10285] URIDINE KINASE38.790.8825
47 Mapoly0005s0220 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 240.250.8883
48 Mapoly0098s0039 [PF01497] Periplasmic binding protein; [PTHR21343:SF6] gb def: Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin synthase) (DTB synthetase) (D; [GO:0003824] catalytic activity; [GO:0009236] cobalamin biosynthetic process; [PTHR21343] DETHIOBIOTIN SYNTHETASE; [GO:0005488] binding; [PF07685] CobB/CobQ-like glutamine amidotransferase domain; [PF01656] CobQ/CobB/MinD/ParA nucleotide binding domain40.300.7327
49 Mapoly0013s0012 [PTHR11624] DEHYDROGENASE RELATED; [K00615] transketolase [EC:2.2.1.1]; [PF00456] Transketolase, thiamine diphosphate binding domain; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [PF02780] Transketolase, C-terminal domain; [2.2.1.1] Transketolase.; [KOG0523] Transketolase42.000.8532
50 Mapoly0194s0011 [PTHR31636] FAMILY NOT NAMED; [PF03514] GRAS domain family42.140.7778
Showing 1 to 50 of 200 records
S