Guide Gene

Gene ID
Mapoly0114s0037
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF25] NAI1, DNA BINDING / TRANSCRIPTION FACTOR; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0114s0037 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF25] NAI1, DNA BINDING / TRANSCRIPTION FACTOR; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS 0.00 1.0000
1 Mapoly0006s0167 [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN1.730.8751
2 Mapoly0043s0058 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE3.160.8720
3 Mapoly0083s0028 [GO:0055114] oxidation-reduction process; [GO:0005515] protein binding; [GO:0016702] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; [PTHR11771] LIPOXYGENASE; [PF01477] PLAT/LH2 domain; [GO:0046872] metal ion binding; [PF00305] Lipoxygenase4.900.8679
4 Mapoly0024s0029 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN6.080.8881
5 Mapoly0142s0026 [PF04303] PrpF protein; [PTHR30349] PHAGE INTEGRASE-RELATED6.480.8462
6 Mapoly0001s0436 [2.6.1.44] Alanine--glyoxylate transaminase.; [K00830] alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]; [GO:0008152] metabolic process; [2.6.1.45] Serine--glyoxylate transaminase.; [PTHR21152] AMINOTRANSFERASE CLASS V; [2.6.1.51] Serine--pyruvate transaminase.; [KOG2862] Alanine-glyoxylate aminotransferase AGT1; [PF00266] Aminotransferase class-V7.480.8793
7 Mapoly0089s0050 [GO:0016021] integral to membrane; [K13947] PIN; auxin efflux carrier family; [GO:0055085] transmembrane transport; [PTHR31752] FAMILY NOT NAMED; [PF03547] Membrane transport protein8.600.7897
8 Mapoly0007s0031 -9.800.8447
9 Mapoly0050s0118 [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF01764] Lipase (class 3); [GO:0006629] lipid metabolic process10.050.7724
10 Mapoly0091s0072 [GO:0000160] phosphorelay signal transduction system; [K14490] histidine-containing phosphotransfer peotein; [GO:0004871] signal transducer activity; [KOG4747] Two-component phosphorelay intermediate involved in MAP kinase cascade regulation; [PF01627] Hpt domain10.100.8424
11 Mapoly0029s0125 [PF01070] FMN-dependent dehydrogenase; [K11517] (S)-2-hydroxy-acid oxidase [EC:1.1.3.15]; [PTHR10578] (S)-2-HYDROXY-ACID OXIDASE-RELATED; [1.1.3.15] (S)-2-hydroxy-acid oxidase.; [GO:0016491] oxidoreductase activity; [KOG0538] Glycolate oxidase11.310.8742
12 Mapoly0031s0098 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily12.690.8314
13 Mapoly0056s0101 [GO:0051087] chaperone binding; [GO:0005515] protein binding; [PF02179] BAG domain; [KOG4361] BCL2-associated athanogene-like proteins and related BAG family chaperone regulators; [PTHR12329] BCL2-ASSOCIATED ATHANOGENE; [PF00240] Ubiquitin family14.490.8187
14 Mapoly0052s0052 [GO:0005515] protein binding; [PF13417] Glutathione S-transferase, N-terminal domain14.970.8549
15 Mapoly0194s0011 [PTHR31636] FAMILY NOT NAMED; [PF03514] GRAS domain family15.870.7823
16 Mapoly0006s0116 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain16.340.7788
17 Mapoly0007s0125 [GO:0008168] methyltransferase activity; [PF03492] SAM dependent carboxyl methyltransferase; [PTHR31009] S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN16.730.8135
18 Mapoly0141s0013 [PF00682] HMGL-like; [K01640] hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]; [PTHR10277:SF1] HYDROXYMETHYLGLUTARYL-COA LYASE; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [4.1.3.4] Hydroxymethylglutaryl-CoA lyase.; [KOG2368] Hydroxymethylglutaryl-CoA lyase; [GO:0003824] catalytic activity17.090.7534
19 Mapoly0082s0001 [GO:0016758] transferase activity, transferring hexosyl groups; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [K12356] coniferyl-alcohol glucosyltransferase [EC:2.4.1.111]; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [2.4.1.111] Coniferyl-alcohol glucosyltransferase.; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase17.750.7713
20 Mapoly0015s0122 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [PTHR11680:SF1] SERINE HYDROXYMETHYLTRANSFERASE; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE18.970.8533
21 Mapoly0088s0024 [PF04873] Ethylene insensitive 3; [K14514] ethylene-insensitive protein 320.710.8206
22 Mapoly0054s0096 -25.610.8127
23 Mapoly0021s0050 [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF13857] Ankyrin repeats (many copies); [PF13962] Domain of unknown function; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN25.880.7937
24 Mapoly0006s0055 [GO:0009523] photosystem II; [GO:0009654] oxygen evolving complex; [GO:0042651] thylakoid membrane; [PF04725] Photosystem II 10 kDa polypeptide PsbR; [GO:0015979] photosynthesis25.920.8583
25 Mapoly0010s0200 [PTHR11668] SERINE/THREONINE PROTEIN PHOSPHATASE; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [KOG0373] Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related; [PTHR11668:SF24] SERINE/THREONINE PROTEIN PHOSPHATASE 6 (PP6); [K01090] protein phosphatase [EC:3.1.3.16]; [3.1.3.16] Phosphoprotein phosphatase.27.290.7526
26 Mapoly0074s0006 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF07983] X8 domain; [PF00332] Glycosyl hydrolases family 1727.350.7929
27 Mapoly0014s0035 [PF00933] Glycosyl hydrolase family 3 N terminal domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR30620] PERIPLASMIC BETA-GLUCOSIDASE-RELATED; [PF01915] Glycosyl hydrolase family 3 C-terminal domain28.840.7718
28 Mapoly0179s0016 [PTHR31218] FAMILY NOT NAMED29.190.8473
29 Mapoly0119s0030 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]29.390.8284
30 Mapoly0053s0046 [PF00484] Carbonic anhydrase; [KOG1578] Predicted carbonic anhydrase involved in protection against oxidative damage; [4.2.1.1] Carbonate dehydratase.; [GO:0008270] zinc ion binding; [GO:0004089] carbonate dehydratase activity; [K01673] carbonic anhydrase [EC:4.2.1.1]; [PTHR11002] FAMILY NOT NAMED32.030.8385
31 Mapoly0023s0138 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity32.450.7840
32 Mapoly0058s0093 [3.1.3.67] Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase.; [PF00782] Dual specificity phosphatase, catalytic domain; [K01110] phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase [EC:3.1.3.67]; [GO:0006470] protein dephosphorylation; [PF10409] C2 domain of PTEN tumour-suppressor protein; [PTHR12305] PHOSPHATASE WITH HOMOLOGY TO TENSIN; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity35.160.7342
33 Mapoly0164s0015 [GO:0015035] protein disulfide oxidoreductase activity; [KOG0910] Thioredoxin-like protein; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [PTHR10438] THIOREDOXIN37.960.8486
34 Mapoly0052s0062 [PF13738] Pyridine nucleotide-disulphide oxidoreductase; [PTHR23023] DIMETHYLANILINE MONOOXYGENASE40.400.8228
35 Mapoly0083s0021 [PF10551] MULE transposase domain41.350.7659
36 Mapoly0088s0025 [3.2.1.26] Beta-fructofuranosidase.; [K01193] beta-fructofuranosidase [EC:3.2.1.26]; [PF00251] Glycosyl hydrolases family 32 N-terminal domain; [KOG0228] Beta-fructofuranosidase (invertase); [PTHR31953] FAMILY NOT NAMED; [PF08244] Glycosyl hydrolases family 32 C terminal41.420.7506
37 Mapoly0062s0096 [K07019] putative glutamine amidotransferase; [PTHR10794] ABHYDROLASE DOMAIN-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family; [KOG1838] Alpha/beta hydrolase41.950.8091
38 Mapoly0061s0013 [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0015078] hydrogen ion transmembrane transporter activity; [GO:0015986] ATP synthesis coupled proton transport; [PF00430] ATP synthase B/B' CF(0); [GO:0045263] proton-transporting ATP synthase complex, coupling factor F(o); [K02109] F-type H+-transporting ATPase subunit b [EC:3.6.3.14]42.210.8549
39 Mapoly0026s0060 [PTHR24067:SF26] UBIQUITIN-CONJUGATING ENZYME E2 A, B; [K10690] ubiquitin-conjugating enzyme E2, other [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [KOG0419] Ubiquitin-protein ligase; [6.3.2.19] Ubiquitin--protein ligase.; [PF00179] Ubiquitin-conjugating enzyme42.660.7918
40 Mapoly0015s0180 [K00434] L-ascorbate peroxidase [EC:1.11.1.11]; [GO:0055114] oxidation-reduction process; [PF00141] Peroxidase; [GO:0020037] heme binding; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity; [PTHR31356] FAMILY NOT NAMED; [1.11.1.11] L-ascorbate peroxidase.43.500.8097
41 Mapoly0006s0049 [K02437] glycine cleavage system H protein; [PF01597] Glycine cleavage H-protein; [PTHR11715] GLYCINE CLEAVAGE SYSTEM H PROTEIN; [KOG3373] Glycine cleavage system H protein (lipoate-binding)44.670.8453
42 Mapoly0047s0072 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family45.230.7976
43 Mapoly0052s0064 [PF02136] Nuclear transport factor 2 (NTF2) domain; [PTHR12612:SF0] SUBFAMILY NOT NAMED; [GO:0006810] transport; [KOG2104] Nuclear transport factor 2; [GO:0005622] intracellular; [PTHR12612] NUCLEAR TRANSPORT FACTOR 246.150.7310
44 Mapoly0058s0038 [PF13405] EF-hand domain; [GO:0005509] calcium ion binding46.150.7916
45 Mapoly0011s0015 -47.330.7969
46 Mapoly0057s0083 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 247.430.8278
47 Mapoly0054s0095 [PF00251] Glycosyl hydrolases family 32 N-terminal domain; [KOG0228] Beta-fructofuranosidase (invertase); [PTHR31953] FAMILY NOT NAMED; [PF08244] Glycosyl hydrolases family 32 C terminal47.830.7790
48 Mapoly1576s0001 [PTHR31636] FAMILY NOT NAMED; [PF03514] GRAS domain family48.680.7505
49 Mapoly0461s0001 [PF13398] Peptidase M50B-like49.400.7206
50 Mapoly0015s0074 [GO:0051537] 2 iron, 2 sulfur cluster binding; [1.10.99.1] Transferred entry: 1.10.9.1.; [GO:0016679] oxidoreductase activity, acting on diphenols and related substances as donors; [GO:0055114] oxidation-reduction process; [GO:0042651] thylakoid membrane; [KOG1671] Ubiquinol cytochrome c reductase, subunit RIP1; [K02636] cytochrome b6-f complex iron-sulfur subunit [EC:1.10.99.1]; [GO:0016491] oxidoreductase activity; [PTHR10134] CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL; [GO:0009496] plastoquinol--plastocyanin reductase activity; [PF00355] Rieske [2Fe-2S] domain; [PF08802] Cytochrome B6-F complex Fe-S subunit49.830.8472
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