Guide Gene

Gene ID
Mapoly0010s0084
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG0367] Protein geranylgeranyltransferase Type I, beta subunit; [K11713] geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59]; [PTHR11774:SF4] GERANYLGERANYL TRANSFERASE TYPE I BETA SUBUNIT; [PF13249] Prenyltransferase-like; [2.5.1.59] Protein geranylgeranyltransferase type I.; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0010s0084 [KOG0367] Protein geranylgeranyltransferase Type I, beta subunit; [K11713] geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59]; [PTHR11774:SF4] GERANYLGERANYL TRANSFERASE TYPE I BETA SUBUNIT; [PF13249] Prenyltransferase-like; [2.5.1.59] Protein geranylgeranyltransferase type I.; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat 0.00 1.0000
1 Mapoly0095s0044 [PTHR24322] FAMILY NOT NAMED; [PF13561] Enoyl-(Acyl carrier protein) reductase; [KOG0725] Reductases with broad range of substrate specificities; [PTHR24322:SF55] UNCHARACTERIZED OXIDOREDUCTASE YUXG4.000.6604
2 Mapoly0020s0159 -4.470.6875
3 Mapoly0061s0052 [PF12710] haloacid dehalogenase-like hydrolase; [PTHR20858] PHOSPHOMETHYLPYRIMIDINE KINASE; [PF03070] TENA/THI-4/PQQC family7.750.6495
4 Mapoly0003s0295 [PF00501] AMP-binding enzyme; [KOG1176] Acyl-CoA synthetase; [PTHR24095:SF52] SUBFAMILY NOT NAMED; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity11.360.7044
5 Mapoly0004s0185 [PTHR13149:SF0] SUBFAMILY NOT NAMED; [KOG4068] Uncharacterized conserved protein; [K12189] ESCRT-II complex subunit VPS25; [PF05871] ESCRT-II complex subunit; [PTHR13149] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS2511.490.6673
6 Mapoly0003s0310 [PF13839] GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p; [PTHR13533] FAMILY NOT NAMED13.040.6869
7 Mapoly0073s0070 [PF05462] Slime mold cyclic AMP receptor; [PTHR23112] G PROTEIN-COUPLED RECEPTOR 157-RELATED; [PTHR23112:SF0] CYCLIC AMP RECEPTOR; [K08467] G protein-coupled receptor 15716.190.5644
8 Mapoly0059s0091 [PF03901] Alg9-like mannosyltransferase family; [KOG2515] Mannosyltransferase; [PTHR22760] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups; [K03846] alpha-1,2-mannosyltransferase [EC:2.4.1.-]; [2.4.1.-] Hexosyltransferases.16.430.6615
9 Mapoly0071s0064 [PTHR11922] GMP SYNTHASE-RELATED; [PF00117] Glutamine amidotransferase class-I; [KOG3179] Predicted glutamine synthetase17.200.6780
10 Mapoly0023s0100 [GO:0006807] nitrogen compound metabolic process; [PTHR21198] GLUTAMATE RACEMASE; [PF01177] Asp/Glu/Hydantoin racemase; [PTHR21198:SF3] gb def: Orf63 protein; [GO:0036361] racemase activity, acting on amino acids and derivatives20.710.6355
11 Mapoly0020s0164 -20.900.6515
12 Mapoly0043s0013 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily20.930.7031
13 Mapoly0004s0184 [GO:0005515] protein binding; [PF00856] SET domain; [K07117] uncharacterized protein; [PTHR12197] SET AND MYND DOMAIN CONTAINING22.540.7042
14 Mapoly0097s0060 [PTHR13890:SF2] MITOCHONDRIAL RNA SPLICING PROTEIN MRS2-RELATED; [KOG2662] Magnesium transporters: CorA family; [GO:0015095] magnesium ion transmembrane transporter activity; [GO:0015693] magnesium ion transport; [PTHR13890] RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL24.980.6672
15 Mapoly0155s0028 [PTHR10052] 60S RIBOSOMAL PROTEIN L18A30.330.5454
16 Mapoly0173s0025 [PF12452] Protein of unknown function (DUF3685)32.590.6737
17 Mapoly0006s0046 [GO:0016758] transferase activity, transferring hexosyl groups; [PTHR11062] EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED; [PF09258] Glycosyl transferase family 64 domain; [GO:0031227] intrinsic to endoplasmic reticulum membrane33.880.6399
18 Mapoly0006s0011 -35.070.6736
19 Mapoly0095s0053 -36.630.6693
20 Mapoly0001s0054 -41.750.5918
21 Mapoly0074s0013 [GO:0018344] protein geranylgeranylation; [K05956] geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]; [KOG0366] Protein geranylgeranyltransferase type II, beta subunit; [PF13249] Prenyltransferase-like; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [2.5.1.60] Protein geranylgeranyltransferase type II.; [GO:0004663] Rab geranylgeranyltransferase activity42.330.6787
22 Mapoly0015s0167 [PTHR32133] FAMILY NOT NAMED; [PF12937] F-box-like; [GO:0005515] protein binding43.650.4441
23 Mapoly0022s0109 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [KOG1597] Transcription initiation factor TFIIB44.770.6857
24 Mapoly0038s0066 [KOG4589] Cell division protein FtsJ; [GO:0008168] methyltransferase activity; [PTHR10920] RIBOSOMAL RNA METHYLTRANSFERASE; [GO:0032259] methylation; [PF01728] FtsJ-like methyltransferase; [GO:0001510] RNA methylation60.980.6480
25 Mapoly0031s0110 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF13637] Ankyrin repeats (many copies)62.640.5736
26 Mapoly0200s0003 [PF13614] AAA domain; [PTHR23264] NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED; [PTHR23264:SF4] MRP-RELATED NUCLEOTIDE-BINDING PROTEIN; [PF10609] ParA/MinD ATPase like; [K03593] ATP-binding protein involved in chromosome partitioning; [KOG3022] Predicted ATPase, nucleotide-binding63.500.6316
27 Mapoly0124s0057 -63.850.6407
28 Mapoly0049s0070 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG1330] Sugar transporter/spinster transmembrane protein; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily64.210.6372
29 Mapoly0055s0061 -64.990.5824
30 Mapoly0007s0165 -65.500.6104
31 Mapoly0026s0076 [K04711] dihydroceramidase [EC:3.5.1.-]; [GO:0006672] ceramide metabolic process; [KOG2329] Alkaline ceramidase; [PF05875] Ceramidase; [GO:0016021] integral to membrane; [3.5.1.-] In linear amides.; [PTHR12956] ALKALINE CERAMIDASE-RELATED; [PTHR12956:SF4] ALKALINE PHYTOCERAMIDASE (APHC) (ALKALINE CERAMIDASE); [GO:0016811] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides66.080.5954
32 Mapoly0050s0100 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity66.540.6106
33 Mapoly0001s0547 [PF07258] HCaRG protein; [PTHR31159] FAMILY NOT NAMED67.970.6624
34 Mapoly0026s0101 -68.370.5921
35 Mapoly0137s0003 -71.440.5713
36 Mapoly2945s0001 -74.340.6526
37 Mapoly0100s0050 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG4341] F-box protein containing LRR74.880.6486
38 Mapoly0043s0066 [PF01963] TraB family; [PTHR21530:SF1] gb def: Hypothetical protein At2g32340; [KOG2860] Uncharacterized conserved protein, contains TraB domain; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN79.650.6118
39 Mapoly0191s0008 [PTHR13002] C3ORF1 PROTEIN-RELATED; [PF02466] Tim17/Tim22/Tim23/Pmp24 family81.440.5811
40 Mapoly0065s0016 [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN81.900.5886
41 Mapoly0028s0096 -83.430.6398
42 Mapoly0089s0028 [PF13302] Acetyltransferase (GNAT) domain; [PTHR13256] N-ACETYLTRANSFERASE 9; [GO:0008080] N-acetyltransferase activity; [KOG4135] Predicted phosphoglucosamine acetyltransferase86.670.5375
43 Mapoly0108s0065 [KOG1432] Predicted DNA repair exonuclease SIA1; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [PTHR32440:SF0] SUBFAMILY NOT NAMED; [PTHR32440] FAMILY NOT NAMED89.670.6587
44 Mapoly0087s0038 [PF04124] Dor1-like family; [PTHR21311] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8; [GO:0017119] Golgi transport complex; [PTHR21311:SF0] SUBFAMILY NOT NAMED; [KOG2069] Golgi transport complex subunit91.650.6322
45 Mapoly0002s0343 [KOG3448] Predicted snRNP core protein; [GO:0006397] mRNA processing; [PTHR13829] SNRNP CORE PROTEIN FAMILY MEMBER; [K12621] U6 snRNA-associated Sm-like protein LSm2; [PF01423] LSM domain91.840.5256
46 Mapoly0064s0025 -92.110.6234
47 Mapoly0024s0105 [KOG3314] Ku70-binding protein; [GO:0004222] metalloendopeptidase activity; [PTHR21711:SF0] SUBFAMILY NOT NAMED; [PF09768] Peptidase M76 family; [PTHR21711] KUB3-PROV PROTEIN92.300.6456
48 Mapoly0085s0071 [PF13248] zinc-ribbon domain94.640.6108
49 Mapoly0067s0064 [PTHR22916] GLYCOSYLTRANSFERASE; [PF00535] Glycosyl transferase family 2; [PF13641] Glycosyltransferase like family 295.950.5112
50 Mapoly0010s0155 [PF08213] Mitochondrial domain of unknown function (DUF1713)97.260.6207
Showing 1 to 50 of 200 records
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