Guide Gene

Gene ID
Mapoly0004s0185
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR13149:SF0] SUBFAMILY NOT NAMED; [KOG4068] Uncharacterized conserved protein; [K12189] ESCRT-II complex subunit VPS25; [PF05871] ESCRT-II complex subunit; [PTHR13149] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0004s0185 [PTHR13149:SF0] SUBFAMILY NOT NAMED; [KOG4068] Uncharacterized conserved protein; [K12189] ESCRT-II complex subunit VPS25; [PF05871] ESCRT-II complex subunit; [PTHR13149] VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 0.00 1.0000
1 Mapoly0191s0008 [PTHR13002] C3ORF1 PROTEIN-RELATED; [PF02466] Tim17/Tim22/Tim23/Pmp24 family4.470.6786
2 Mapoly0008s0076 [GO:0005840] ribosome; [PTHR18804] FAMILY NOT NAMED; [GO:0003735] structural constituent of ribosome; [PF00444] Ribosomal protein L36; [GO:0005622] intracellular; [KOG4122] Mitochondrial/chloroplast ribosomal protein L36; [GO:0006412] translation5.830.6904
3 Mapoly0209s0001 [KOG3150] Uncharacterized conserved protein; [PF05608] Protein of unknown function (DUF778); [PTHR20921] UNCHARACTERIZED; [PTHR20921:SF1] gb def: Hypothetical protein5.830.6555
4 Mapoly0186s0006 [PTHR13166] PROTEIN C6ORF149; [PF05347] Complex 1 protein (LYR family); [PTHR13166:SF4] SUBFAMILY NOT NAMED6.000.6822
5 Mapoly0010s0084 [KOG0367] Protein geranylgeranyltransferase Type I, beta subunit; [K11713] geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59]; [PTHR11774:SF4] GERANYLGERANYL TRANSFERASE TYPE I BETA SUBUNIT; [PF13249] Prenyltransferase-like; [2.5.1.59] Protein geranylgeranyltransferase type I.; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat11.490.6673
6 Mapoly0035s0060 [PF03798] TLC domain; [GO:0016021] integral to membrane; [PTHR13439] CT120 PROTEIN; [KOG4561] Uncharacterized conserved protein, contains TBC domain12.650.6491
7 Mapoly0001s0547 [PF07258] HCaRG protein; [PTHR31159] FAMILY NOT NAMED14.590.6949
8 Mapoly0133s0015 [PTHR14744] FAMILY NOT NAMED; [KOG3138] Predicted N-acetyltransferase; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family21.680.5816
9 Mapoly0038s0066 [KOG4589] Cell division protein FtsJ; [GO:0008168] methyltransferase activity; [PTHR10920] RIBOSOMAL RNA METHYLTRANSFERASE; [GO:0032259] methylation; [PF01728] FtsJ-like methyltransferase; [GO:0001510] RNA methylation24.190.6776
10 Mapoly0059s0038 [KOG3170] Conserved phosducin-like protein; [PTHR21148] PHOSDUCIN-RELATED; [PTHR21148:SF1] PHOSDUCIN-LIKE PROTEIN 2, 3 (VIRAL IAP-ASSOCIATED FACTOR 1); [PF02114] Phosducin24.920.6397
11 Mapoly0173s0025 [PF12452] Protein of unknown function (DUF3685)25.570.6776
12 Mapoly0053s0064 [GO:0016020] membrane; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [GO:0008236] serine-type peptidase activity; [KOG1568] Mitochondrial inner membrane protease, subunit IMP2; [K09648] mitochondrial inner membrane protease subunit 2 [EC:3.4.99.-]; [3.4.99.-] Endopeptidases of unknown catalytic mechanism.; [PF00717] Peptidase S24-like; [GO:0006508] proteolysis26.230.6569
13 Mapoly0049s0070 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG1330] Sugar transporter/spinster transmembrane protein; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily31.750.6621
14 Mapoly0002s0194 [GO:0000287] magnesium ion binding; [PTHR14217:SF1] INOSITOL 1,3,4-TRIPHOSPHATE 5/6 KINASE; [GO:0005524] ATP binding; [PTHR14217] FAMILY NOT NAMED; [GO:0052725] inositol-1,3,4-trisphosphate 6-kinase activity; [GO:0005622] intracellular; [GO:0047325] inositol tetrakisphosphate 1-kinase activity; [GO:0032957] inositol trisphosphate metabolic process; [PF05770] Inositol 1, 3, 4-trisphosphate 5/6-kinase; [GO:0052726] inositol-1,3,4-trisphosphate 5-kinase activity32.590.5709
15 Mapoly0085s0071 [PF13248] zinc-ribbon domain32.860.6600
16 Mapoly0026s0076 [K04711] dihydroceramidase [EC:3.5.1.-]; [GO:0006672] ceramide metabolic process; [KOG2329] Alkaline ceramidase; [PF05875] Ceramidase; [GO:0016021] integral to membrane; [3.5.1.-] In linear amides.; [PTHR12956] ALKALINE CERAMIDASE-RELATED; [PTHR12956:SF4] ALKALINE PHYTOCERAMIDASE (APHC) (ALKALINE CERAMIDASE); [GO:0016811] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides34.500.6307
17 Mapoly0023s0134 [PTHR12710] NUCLEAR PROTEIN LOCALIZATION 4; [K14015] nuclear protein localization protein 4 homolog; [PF05021] NPL4 family; [PF11543] Nuclear pore localisation protein NPL4; [KOG2834] Nuclear pore complex, rNpl4 component (sc Npl4)35.100.4985
18 Mapoly0116s0019 -37.750.6450
19 Mapoly0007s0165 -40.210.6344
20 Mapoly0024s0105 [KOG3314] Ku70-binding protein; [GO:0004222] metalloendopeptidase activity; [PTHR21711:SF0] SUBFAMILY NOT NAMED; [PF09768] Peptidase M76 family; [PTHR21711] KUB3-PROV PROTEIN42.250.6744
21 Mapoly0036s0131 -43.890.6728
22 Mapoly0052s0020 [K03424] TatD DNase family protein [EC:3.1.21.-]; [GO:0016888] endodeoxyribonuclease activity, producing 5'-phosphomonoesters; [KOG3020] TatD-related DNase; [3.1.21.-] Endodeoxyribonucleases producing 5'-phosphomonoesters.; [PF01026] TatD related DNase; [PTHR10060] TATD FAMILY DEOXYRIBONUCLEASE44.360.6737
23 Mapoly0036s0156 [PTHR15857] COMM DOMAIN CONTAINING PROTEIN 2; [PF07258] HCaRG protein50.200.6064
24 Mapoly0035s0053 [KOG4114] Cytochrome c oxidase assembly protein PET191; [PF10203] Cytochrome c oxidase assembly protein PET19150.500.6146
25 Mapoly0089s0053 [PTHR10072] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN; [KOG1120] Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain); [PF01521] Iron-sulphur cluster biosynthesis52.310.5925
26 Mapoly0074s0013 [GO:0018344] protein geranylgeranylation; [K05956] geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]; [KOG0366] Protein geranylgeranyltransferase type II, beta subunit; [PF13249] Prenyltransferase-like; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [2.5.1.60] Protein geranylgeranyltransferase type II.; [GO:0004663] Rab geranylgeranyltransferase activity53.290.6702
27 Mapoly0077s0061 -53.480.5989
28 Mapoly0011s0156 -55.500.6464
29 Mapoly0106s0015 [PTHR12561] LIPOATE-PROTEIN LIGASE; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family56.550.6439
30 Mapoly0001s0402 [PF09991] Predicted membrane protein (DUF2232)58.640.6516
31 Mapoly0094s0023 [PTHR13582] M-PHASE PHOSPHOPROTEIN 6; [PF10175] M-phase phosphoprotein 662.610.6156
32 Mapoly0007s0070 [PF08991] Domain of unknown function (DUF1903)63.470.6087
33 Mapoly0057s0010 [PF13865] C-terminal duplication domain of Friend of PRMT163.690.4547
34 Mapoly0180s0025 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily64.540.5854
35 Mapoly0064s0006 [K03858] phosphatidylinositol glycan, class H; [KOG4551] GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis; [PF10181] GPI-GlcNAc transferase complex, PIG-H component; [PTHR15231] PHOSPHATIDYLINOSITOL GLYCAN, CLASS H; [GO:0017176] phosphatidylinositol N-acetylglucosaminyltransferase activity64.670.6133
36 Mapoly0027s0113 [PF04148] Transmembrane adaptor Erv26; [KOG4136] Predicted mitochondrial cholesterol transporter; [PTHR13144:SF0] SUBFAMILY NOT NAMED; [PTHR13144] TEX261 PROTEIN64.720.5936
37 Mapoly0108s0055 [GO:0016020] membrane; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [GO:0008236] serine-type peptidase activity; [KOG1568] Mitochondrial inner membrane protease, subunit IMP2; [PTHR12383:SF5] MITOCHONDRIAL INNER MEMBRANE SIGNAL PEPTIDASE, PUTATIVE SERINE PEPTIDASE CLAN S; [GO:0006508] proteolysis67.260.6104
38 Mapoly0020s0159 -67.350.6010
39 Mapoly0023s0103 [KOG2792] Putative cytochrome C oxidase assembly protein; [PF02630] SCO1/SenC; [PTHR12151] SCO1/SENC; [K07152] dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119]; [PTHR12151:SF5] SENC68.120.6637
40 Mapoly0001s0054 -68.410.5665
41 Mapoly0003s0233 -69.240.6337
42 Mapoly0004s0184 [GO:0005515] protein binding; [PF00856] SET domain; [K07117] uncharacterized protein; [PTHR12197] SET AND MYND DOMAIN CONTAINING69.890.6654
43 Mapoly0175s0009 [PTHR13068] CGI-12 PROTEIN-RELATED72.250.5600
44 Mapoly0095s0053 -75.390.6386
45 Mapoly0010s0155 [PF08213] Mitochondrial domain of unknown function (DUF1713)75.520.6350
46 Mapoly0065s0016 [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN77.990.5888
47 Mapoly0089s0028 [PF13302] Acetyltransferase (GNAT) domain; [PTHR13256] N-ACETYLTRANSFERASE 9; [GO:0008080] N-acetyltransferase activity; [KOG4135] Predicted phosphoglucosamine acetyltransferase78.450.5452
48 Mapoly0001s0548 [PF06155] Protein of unknown function (DUF971)82.240.5909
49 Mapoly0002s0246 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase82.360.6470
50 Mapoly0023s0044 [PTHR12052:SF4] THIOREDOXIN-LIKE PROTEN 4A, 4B; [GO:0007067] mitosis; [GO:0005681] spliceosomal complex; [PTHR12052] THIOREDOXIN-LIKE PROTEN 4A, 4B; [KOG3414] Component of the U4/U6.U5 snRNP/mitosis protein DIM1; [PF02966] Mitosis protein DIM184.290.5808
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