Guide Gene

Gene ID
Mapoly0003s0280
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[3.2.2.21] DNA-3-methyladenine glycosylase II.; [GO:0003677] DNA binding; [GO:0006284] base-excision repair; [PF02245] Methylpurine-DNA glycosylase (MPG); [K03652] DNA-3-methyladenine glycosylase [EC:3.2.2.21]; [PTHR10429:SF0] DNA-3-METHYLADENINE GLYCOSYLASE; [PTHR10429] DNA-3-METHYLADENINE GLYCOSYLASE; [GO:0003905] alkylbase DNA N-glycosylase activity; [KOG4486] 3-methyladenine DNA glycosylase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0003s0280 [3.2.2.21] DNA-3-methyladenine glycosylase II.; [GO:0003677] DNA binding; [GO:0006284] base-excision repair; [PF02245] Methylpurine-DNA glycosylase (MPG); [K03652] DNA-3-methyladenine glycosylase [EC:3.2.2.21]; [PTHR10429:SF0] DNA-3-METHYLADENINE GLYCOSYLASE; [PTHR10429] DNA-3-METHYLADENINE GLYCOSYLASE; [GO:0003905] alkylbase DNA N-glycosylase activity; [KOG4486] 3-methyladenine DNA glycosylase 0.00 1.0000
1 Mapoly0041s0121 [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain3.460.7686
2 Mapoly0062s0088 [GO:0008915] lipid-A-disaccharide synthase activity; [PTHR30372] LIPID-A-DISACCHARIDE SYNTHASE; [PF02684] Lipid-A-disaccharide synthetase; [GO:0009245] lipid A biosynthetic process3.460.7775
3 Mapoly0046s0117 -6.930.7307
4 Mapoly0029s0094 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PTHR20957] UNCHARACTERIZED8.770.7175
5 Mapoly0033s0102 -9.490.7440
6 Mapoly0046s0029 -9.750.7377
7 Mapoly0027s0023 -11.490.7408
8 Mapoly0003s0303 [GO:0005515] protein binding; [KOG0305] Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits; [PTHR19918:SF7] gb def: SPCC1620.04c protein; [PTHR19918] CELL DIVISION CYCLE 20 (CDC20) (FIZZY)-RELATED; [K03364] cell division cycle 20-like protein 1, cofactor of APC complex; [PF00400] WD domain, G-beta repeat15.300.7204
9 Mapoly0093s0028 [GO:0003677] DNA binding; [PTHR11850] HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; [GO:0006355] regulation of transcription, DNA-dependent; [PF05920] Homeobox KN domain20.000.7093
10 Mapoly0115s0036 [GO:0005524] ATP binding; [KOG0055] Multidrug/pheromone exporter, ABC superfamily; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter21.450.7201
11 Mapoly0004s0253 [GO:0016020] membrane; [PTHR10896] GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE (BETA-1,3-GLUCURONYLTRANSFERASE); [PF03360] Glycosyltransferase family 43; [KOG1476] Beta-1,3-glucuronyltransferase B3GAT1/SQV-8; [GO:0015018] galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity27.570.7257
12 Mapoly0056s0071 [PTHR13507] UNCHARACTERIZED; [PF06658] Protein of unknown function (DUF1168)31.080.7264
13 Mapoly0019s0153 [GO:0005524] ATP binding; [GO:0005674] transcription factor TFIIF complex; [PTHR10445:SF0] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2; [KOG2905] Transcription initiation factor IIF, small subunit (RAP30); [3.6.4.12] DNA helicase.; [K03139] transcription initiation factor TFIIF subunit beta [EC:3.6.4.12]; [PF02270] Transcription initiation factor IIF, beta subunit; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PTHR10445] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 231.460.6912
14 Mapoly0043s0089 [PF12780] P-loop containing dynein motor region D4; [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [GO:0005524] ATP binding; [PF12775] P-loop containing dynein motor region D3; [GO:0005858] axonemal dynein complex; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [PF07728] AAA domain (dynein-related subfamily); [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF08393] Dynein heavy chain, N-terminal region 2; [PF12781] ATP-binding dynein motor region D5; [GO:0003341] cilium movement; [PTHR10676:SF138] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [GO:0003777] microtubule motor activity38.160.6923
15 Mapoly0003s0229 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain41.260.6565
16 Mapoly0138s0047 -42.810.6769
17 Mapoly0115s0038 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [PTHR14614:SF3] UNCHARACTERIZED; [KOG2793] Putative N2,N2-dimethylguanosine tRNA methyltransferase44.410.6915
18 Mapoly0100s0031 [PF00817] impB/mucB/samB family; [2.7.7.7] DNA-directed DNA polymerase.; [GO:0006281] DNA repair; [PF11799] impB/mucB/samB family C-terminal domain; [PTHR11076] DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; [GO:0003887] DNA-directed DNA polymerase activity; [GO:0003684] damaged DNA binding; [KOG2095] DNA polymerase iota/DNA damage inducible protein; [K03509] DNA polymerase eta subunit [EC:2.7.7.7]45.030.6933
19 Mapoly0023s0164 [GO:0003723] RNA binding; [GO:0004523] ribonuclease H activity; [PF01351] Ribonuclease HII; [PTHR10954] RIBONUCLEASE H2 SUBUNIT A45.750.6952
20 Mapoly0061s0059 [PTHR12725] HALOACID DEHALOGENASE-LIKE HYDROLASE; [PF13419] Haloacid dehalogenase-like hydrolase; [KOG3085] Predicted hydrolase (HAD superfamily)46.720.6843
21 Mapoly0090s0053 [PF11145] Protein of unknown function (DUF2921)47.150.6020
22 Mapoly0005s0270 [PTHR10588:SF32] LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48; [PTHR10588] FAMILY NOT NAMED; [KOG1644] U2-associated snRNP A' protein; [PF14580] Leucine-rich repeat48.170.6978
23 Mapoly0073s0061 [PF04862] Protein of unknown function (DUF642)49.300.6775
24 Mapoly0001s0063 [PTHR11635] CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN; [PF00027] Cyclic nucleotide-binding domain52.020.6954
25 Mapoly0032s0048 [KOG2106] Uncharacterized conserved protein, contains HELP and WD40 domains; [GO:0005515] protein binding; [PTHR32215] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat57.450.7109
26 Mapoly0007s0084 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR13208] MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4; [PF10018] Vitamin-D-receptor interacting Mediator subunit 4; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PTHR13208:SF2] gb def: cg8609 gene product [drosophila melanogaster]57.480.7122
27 Mapoly0095s0061 [PF02469] Fasciclin domain61.140.6498
28 Mapoly0056s0054 [GO:0006506] GPI anchor biosynthetic process; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K03857] phosphatidylinositol glycan, class A [EC:2.4.1.198]; [PTHR12526] GLYCOSYLTRANSFERASE; [KOG1111] N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase; [2.4.1.198] Phosphatidylinositol N-acetylglucosaminyltransferase.; [PF08288] PIGA (GPI anchor biosynthesis)63.380.7147
29 Mapoly0229s0008 [PF13837] Myb/SANT-like DNA-binding domain64.370.6668
30 Mapoly0047s0022 [PF00782] Dual specificity phosphatase, catalytic domain; [K01104] protein-tyrosine phosphatase [EC:3.1.3.48]; [GO:0006470] protein dephosphorylation; [PTHR23339] TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [3.1.3.48] Protein-tyrosine-phosphatase.; [PTHR23339:SF25] DUAL SPECIFICITY PROTEIN PHOSPHATASE67.620.7082
31 Mapoly0023s0099 -68.740.6849
32 Mapoly0031s0053 [PF12796] Ankyrin repeats (3 copies); [PTHR24142] FAMILY NOT NAMED69.460.7157
33 Mapoly0173s0012 [PF04113] Gpi16 subunit, GPI transamidase component; [KOG2407] GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis; [K05292] phosphatidylinositol glycan, class T; [GO:0016255] attachment of GPI anchor to protein; [PTHR12959:SF11] GPI TRANSAMIDASE COMPONENT PIG-T; [GO:0042765] GPI-anchor transamidase complex; [PTHR12959] GPI TRANSAMIDASE COMPONENT PIG-T-RELATED69.910.6926
34 Mapoly0009s0190 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity71.750.6718
35 Mapoly0022s0169 [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12780] P-loop containing dynein motor region D4; [K10408] dynein heavy chain, axonemal; [PF12775] P-loop containing dynein motor region D3; [GO:0005858] axonemal dynein complex; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF08393] Dynein heavy chain, N-terminal region 2; [PF12781] ATP-binding dynein motor region D5; [GO:0003341] cilium movement; [PTHR10676:SF138] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [GO:0003777] microtubule motor activity71.750.6832
36 Mapoly0009s0233 [PF08449] UAA transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1444] Nucleotide-sugar transporter VRG4/SQV-7; [GO:0055085] transmembrane transport74.940.5329
37 Mapoly0054s0077 -76.030.6514
38 Mapoly0026s0023 [KOG3263] Nucleic acid binding protein; [PF08648] Protein of unknown function (DUF1777); [PTHR31077] FAMILY NOT NAMED; [K12846] U4/U6.U5 tri-snRNP-associated protein 376.210.6782
39 Mapoly0001s0156 [PTHR21737] POLYGLUTAMINE BINDING PROTEIN 1/MARVEL (MEMBRANE-ASSOCIATING) DOMAIN CONTAINING 3; [PF10312] Conserved mid region of cactin; [GO:0005515] protein binding; [PTHR21737:SF4] CACTIN-RELATED; [KOG2370] Cactin; [PF09732] Cactus-binding C-terminus of cactin protein76.840.7071
40 Mapoly0001s0212 [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat78.570.6966
41 Mapoly0007s0155 [PF06405] Red chlorophyll catabolite reductase (RCC reductase); [K13545] red chlorophyll catabolite reductase [EC:1.3.1.80]; [1.3.1.80] Red chlorophyll catabolite reductase.80.100.5676
42 Mapoly0040s0077 -82.850.6316
43 Mapoly0042s0051 [PF06694] Plant nuclear matrix protein 1 (NMP1); [PTHR14352] FAMILY NOT NAMED84.070.6660
44 Mapoly0064s0067 [KOG2989] Uncharacterized conserved protein; [PTHR12111:SF1] UNCHARACTERIZED; [PF04502] Family of unknown function (DUF572); [PTHR12111] CELL CYCLE CONTROL PROTEIN CWF16-RELATED84.750.6981
45 Mapoly0044s0100 [K03847] alpha-1,6-mannosyltransferase [EC:2.4.1.130]; [PTHR22760:SF1] GLYCOSYLTRANSFERASE; [KOG2516] Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family); [PF03901] Alg9-like mannosyltransferase family; [PTHR22760] GLYCOSYLTRANSFERASE; [2.4.1.130] Transferred entry: 2.4.1.258, 2.4.1.259, 2.4.1.260 and 2.4.1.261.; [GO:0016757] transferase activity, transferring glycosyl groups86.950.6822
46 Mapoly0051s0107 [PF01926] 50S ribosome-binding GTPase; [GO:0005525] GTP binding89.250.6357
47 Mapoly0110s0025 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding90.410.6641
48 Mapoly0096s0021 [GO:0030130] clathrin coat of trans-Golgi network vesicle; [KOG4031] Vesicle coat protein clathrin, light chain; [GO:0016192] vesicle-mediated transport; [PTHR10639] CLATHRIN LIGHT CHAIN; [PF01086] Clathrin light chain; [GO:0006886] intracellular protein transport; [GO:0030132] clathrin coat of coated pit; [GO:0005198] structural molecule activity90.900.6690
49 Mapoly0101s0002 [PTHR23091:SF68] SUBFAMILY NOT NAMED; [GO:0008080] N-acetyltransferase activity; [KOG3139] N-acetyltransferase; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE94.060.5870
50 Mapoly0104s0041 [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily; [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF06813] Nodulin-like94.920.6407
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