Guide Gene

Gene ID
Mapoly0001s0139
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K06694] 26S proteasome non-ATPase regulatory subunit 10; [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0139 [K06694] 26S proteasome non-ATPase regulatory subunit 10; [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 0.00 1.0000
1 Mapoly0043s0065 [KOG1534] Putative transcription factor FET5; [GO:0000166] nucleotide binding; [K06883] 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]; [PTHR21231] XPA-BINDING PROTEIN 1-RELATED; [PTHR21231:SF4] PRYA1876; [PF03029] Conserved hypothetical ATP binding protein1.410.7686
2 Mapoly0080s0014 [PTHR12786:SF1] UNCHARACTERIZED; [PTHR12786] SPLICING FACTOR SF3A-RELATED; [PF13019] Telomere stability and silencing3.870.7221
3 Mapoly0010s0154 [KOG4484] Uncharacterized conserved protein; [PF10153] Uncharacterised conserved protein (DUF2361)7.480.7042
4 Mapoly0037s0047 [K11416] mono-ADP-ribosyltransferase sirtuin 6 [EC:2.4.2.31]; [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [2.4.2.31] NAD(+)--protein-arginine ADP-ribosyltransferase.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [KOG1905] Class IV sirtuins (SIR2 family)9.170.7196
5 Mapoly0003s0199 [KOG4723] Uncharacterized conserved protein; [PTHR16184] FAMILY NOT NAMED; [PF09807] Uncharacterized conserved protein (DUF2348)11.220.7540
6 Mapoly0019s0153 [GO:0005524] ATP binding; [GO:0005674] transcription factor TFIIF complex; [PTHR10445:SF0] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2; [KOG2905] Transcription initiation factor IIF, small subunit (RAP30); [3.6.4.12] DNA helicase.; [K03139] transcription initiation factor TFIIF subunit beta [EC:3.6.4.12]; [PF02270] Transcription initiation factor IIF, beta subunit; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PTHR10445] GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 215.870.6936
7 Mapoly0005s0018 [KOG4508] Uncharacterized conserved protein; [PTHR15975] UNCHARACTERIZED; [PF10155] Uncharacterized conserved protein (DUF2363)15.970.7159
8 Mapoly0001s0421 [KOG4178] Soluble epoxide hydrolase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family16.490.6952
9 Mapoly0095s0061 [PF02469] Fasciclin domain16.490.6740
10 Mapoly0022s0014 [GO:0006355] regulation of transcription, DNA-dependent; [PF07818] HCNGP-like protein; [PTHR13464] TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP16.790.7068
11 Mapoly0111s0002 [K12848] U4/U6.U5 tri-snRNP component SNU23; [PF12874] Zinc-finger of C2H2 type; [PTHR23067] DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN; [KOG4727] U1-like Zn-finger protein19.770.6736
12 Mapoly0011s0013 [PTHR13264:SF5] SUBFAMILY NOT NAMED; [K12868] pre-mRNA-splicing factor SYF2; [PTHR13264] GCIP-INTERACTING PROTEIN P29; [KOG2609] Cyclin D-interacting protein GCIP; [PF08231] SYF2 splicing factor20.350.6432
13 Mapoly0006s0306 [GO:0005524] ATP binding; [PTHR22942] RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER; [GO:0003697] single-stranded DNA binding; [GO:0006281] DNA repair; [GO:0009432] SOS response; [PF00154] recA bacterial DNA recombination protein; [K03553] recombination protein RecA; [KOG1433] DNA repair protein RAD51/RHP5521.490.6875
14 Mapoly0044s0113 [PTHR14255] ATP-DEPENDENT PROTEASE (CEREBLON); [PTHR14255:SF3] gb def: Hypothetical protein M18.6; [GO:0016021] integral to membrane; [PF01925] Sulfite exporter TauE/SafE23.490.6680
15 Mapoly0051s0053 [PF14774] FAM177 family24.190.6776
16 Mapoly0051s0089 [GO:0003677] DNA binding; [K03013] DNA-directed RNA polymerases I, II, and III subunit RPABC1; [PF03871] RNA polymerase Rpb5, N-terminal domain; [PTHR10535] FAMILY NOT NAMED; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF01191] RNA polymerase Rpb5, C-terminal domain; [GO:0003899] DNA-directed RNA polymerase activity; [KOG3218] RNA polymerase, 25-kDa subunit (common to polymerases I, II and III)26.150.6850
17 Mapoly0096s0017 [PTHR12526:SF23] ASPARAGINE-LINKED GLYCOSYLATION PROTEIN 11 HOMOLOG; [KOG1387] Glycosyltransferase; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [PTHR12526] GLYCOSYLTRANSFERASE; [K03844] alpha-1,2-mannosyltransferase [EC:2.4.1.-]; [2.4.1.-] Hexosyltransferases.26.500.6511
18 Mapoly0141s0028 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF06839] GRF zinc finger; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding28.980.6677
19 Mapoly0095s0008 [PTHR11135] HISTONE ACETYLTRANSFERASE-RELATED; [PF04055] Radical SAM superfamily; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [GO:0003824] catalytic activity; [KOG2535] RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase; [GO:0051536] iron-sulfur cluster binding; [2.3.1.48] Histone acetyltransferase.; [PTHR11135:SF0] SUBFAMILY NOT NAMED; [K07739] elongator complex protein 3 [EC:2.3.1.48]31.430.6511
20 Mapoly0020s0071 [GO:0006784] heme a biosynthetic process; [KOG2725] Cytochrome oxidase assembly factor COX15; [GO:0055114] oxidation-reduction process; [GO:0016021] integral to membrane; [PF02628] Cytochrome oxidase assembly protein; [PTHR23289] CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15; [K02259] cytochrome c oxidase subunit XV assembly protein; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors32.450.6282
21 Mapoly0013s0005 [PF11566] PI31 proteasome regulator N-terminal; [KOG4761] Proteasome formation inhibitor PI31; [K06700] proteasome inhibitor subunit 1 (PI31); [PTHR13266] PROTEASOME INHIBITOR33.200.6718
22 Mapoly0157s0021 [PTHR13889:SF11] SUBFAMILY NOT NAMED; [PF08606] Prp19/Pso4-like; [GO:0005515] protein binding; [PTHR13889] PRE-MRNA SPLICING FACTOR PRP19-RELATED; [PF00400] WD domain, G-beta repeat36.400.6412
23 Mapoly0113s0054 [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [3.5.1.-] In linear amides.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [K11415] NAD-dependent deacetylase sirtuin 5 [EC:3.5.1.-]; [KOG2683] Sirtuin 4 and related class II sirtuins (SIR2 family)36.740.6646
24 Mapoly0153s0040 [PTHR25040] FAMILY NOT NAMED; [PF00226] DnaJ domain39.570.6252
25 Mapoly0014s0124 [PTHR12849] RNA LARIAT DEBRANCHING ENZYME; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [GO:0006397] mRNA processing; [GO:0016788] hydrolase activity, acting on ester bonds; [PF05011] Lariat debranching enzyme, C-terminal domain; [KOG2863] RNA lariat debranching enzyme40.250.6930
26 Mapoly0032s0039 [PF01963] TraB family; [PTHR21530:SF0] SUBFAMILY NOT NAMED; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN40.250.6371
27 Mapoly0029s0123 [PTHR14269] CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED; [KOG1618] Predicted phosphatase; [PTHR14269:SF4] UNCHARACTERIZED; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like40.350.6440
28 Mapoly0076s0011 [PF10419] TFIIIC subunit; [PTHR21860] UNCHARACTERIZED; [PTHR21860:SF2] SUBFAMILY NOT NAMED49.110.6044
29 Mapoly0164s0007 [GO:0005515] protein binding; [PF00789] UBX domain; [KOG2507] Ubiquitin regulatory protein UBXD2, contains UAS and UBX domains; [PTHR13020] UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING50.420.6611
30 Mapoly0024s0122 [PTHR30060] INNER MEMBRANE PROTEIN; [PF09745] Coiled-coil domain-containing protein 55 (DUF2040); [PTHR30060:SF0] INNER MEMBRANE PROTEIN52.960.6396
31 Mapoly0006s0064 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF14392] Zinc knuckle; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding52.990.6814
32 Mapoly0083s0035 [KOG3339] Predicted glycosyltransferase; [K07441] beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]; [PTHR12154:SF2] gb def: N terminus subunit of GlcA transferase; [PF08660] Oligosaccharide biosynthesis protein Alg14 like; [2.4.1.141] N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase.; [PTHR12154] GLYCOSYL TRANSFERASE-RELATED54.770.6613
33 Mapoly0060s0029 [PF15370] Domain of unknown function (DUF4598)57.430.6583
34 Mapoly0110s0025 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding57.910.6651
35 Mapoly0050s0106 [GO:0005515] protein binding; [PF13414] TPR repeat; [PTHR15544] OSMOSIS RESPONSIVE FACTOR; [PTHR15544:SF0] SUBFAMILY NOT NAMED; [PF00515] Tetratricopeptide repeat59.400.6228
36 Mapoly0003s0263 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0884] Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K12734] peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]63.920.6720
37 Mapoly0001s0063 [PTHR11635] CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN; [PF00027] Cyclic nucleotide-binding domain64.340.6694
38 Mapoly0075s0024 [PF06747] CHCH domain; [PTHR21107] FAMILY NOT NAMED; [KOG3477] Putative cytochrome c oxidase, subunit COX1965.100.5978
39 Mapoly0027s0023 -71.780.6637
40 Mapoly0036s0026 [PF15375] Domain of unknown function (DUF4602)73.320.6814
41 Mapoly0009s0190 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity76.220.6538
42 Mapoly0140s0034 -77.210.6685
43 Mapoly0020s0167 [PF03725] 3' exoribonuclease family, domain 2; [KOG1068] Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases; [K11600] exosome complex component RRP41; [PTHR11953] RIBONUCLEASE PH RELATED; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11953:SF0] SUBFAMILY NOT NAMED77.580.6385
44 Mapoly0013s0163 [PF05237] MoeZ/MoeB domain; [PTHR10953:SF102] SUBFAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG2017] Molybdopterin synthase sulfurylase; [PF00899] ThiF family; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [K11996] adenylyltransferase and sulfurtransferase; [GO:0003824] catalytic activity78.330.6096
45 Mapoly0051s0029 [PTHR12735] BOLA-LIKE PROTEIN-RELATED; [KOG2313] Stress-induced protein UVI31+; [PF13837] Myb/SANT-like DNA-binding domain; [PF01722] BolA-like protein78.970.6296
46 Mapoly0042s0037 [PTHR13904] PRE-MRNA SPLICING FACTOR PRP31; [PF01798] Putative snoRNA binding domain; [GO:0046540] U4/U6 x U5 tri-snRNP complex; [KOG2574] mRNA splicing factor PRP31; [PF08060] NOSIC (NUC001) domain; [PF09785] Prp31 C terminal domain; [GO:0000244] assembly of spliceosomal tri-snRNP; [GO:0000398] mRNA splicing, via spliceosome; [K12844] U4/U6 small nuclear ribonucleoprotein PRP3180.240.6386
47 Mapoly0080s0021 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [K13117] ATP-dependent RNA helicase DDX35 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold80.610.6388
48 Mapoly0005s0244 [KOG4536] Predicted membrane protein; [PF10160] Predicted membrane protein; [PTHR15876] FAMILY NOT NAMED82.660.6369
49 Mapoly0135s0033 [PF07093] SGT1 protein; [KOG2406] MADS box transcription factor; [PTHR13060] SGT1 PROTEIN (HSGT1) (SUPPRESSOR OF GCR2)83.430.6631
50 Mapoly0062s0090 [KOG4172] Predicted E3 ubiquitin ligase; [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED; [PF13920] Zinc finger, C3HC4 type (RING finger)85.780.6588
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