Guide Gene
- Gene ID
- Mapoly0214s0003
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG1342] Histone deacetylase complex, catalytic component RPD3; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0214s0003 [KOG1342] Histone deacetylase complex, catalytic component RPD3; [PF00850] Histone deacetylase domain; [PTHR10625] HISTONE DEACETYLASE 0.00 1.0000 1 Mapoly0002s0041 [PF03917] Eukaryotic glutathione synthase, ATP binding domain; [GO:0005524] ATP binding; [GO:0004363] glutathione synthase activity; [6.3.2.3] Glutathione synthase.; [K01920] glutathione synthase [EC:6.3.2.3]; [PTHR11130:SF0] SUBFAMILY NOT NAMED; [KOG0021] Glutathione synthetase; [GO:0006750] glutathione biosynthetic process; [PF03199] Eukaryotic glutathione synthase; [PTHR11130] GLUTATHIONE SYNTHETASE 6.93 0.6391 2 Mapoly0072s0091 [PF00657] GDSL-like Lipase/Acylhydrolase; [PTHR22835] ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006629] lipid metabolic process 13.08 0.6731 3 Mapoly0036s0043 [GO:0005515] protein binding; [PF00856] SET domain; [PTHR22884] SET DOMAIN PROTEINS 15.62 0.6323 4 Mapoly0040s0101 [GO:0055114] oxidation-reduction process; [PTHR31155] ACYL-(ACYL-CARRIER-PROTEIN) DESATURASE-RELATED; [GO:0006631] fatty acid metabolic process; [1.14.19.2] Acyl-[acyl-carrier-protein] desaturase.; [PF03405] Fatty acid desaturase; [K03921] acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2]; [GO:0045300] acyl-[acyl-carrier-protein] desaturase activity 17.03 0.5588 5 Mapoly0047s0117 [PTHR11586:SF1] SUBFAMILY NOT NAMED; [KOG2241] tRNA-binding protein; [PF01588] Putative tRNA binding domain; [GO:0000049] tRNA binding; [PTHR11586] FAMILY NOT NAMED 20.00 0.6394 6 Mapoly0004s0151 [GO:0016567] protein ubiquitination; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315:SF7] ANKYRIN-REPEAT-ARM DOMAIN PROTEIN; [GO:0004842] ubiquitin-protein ligase activity; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING; [PF04564] U-box domain 28.46 0.5325 7 Mapoly0003s0068 [KOG1662] Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [K02137] F-type H+-transporting ATPase oligomycin sensitivity conferral protein [EC:3.6.3.14]; [PTHR11910] ATP SYNTHASE DELTA CHAIN; [GO:0015986] ATP synthesis coupled proton transport; [PF00213] ATP synthase delta (OSCP) subunit 36.33 0.6274 8 Mapoly0140s0033 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 42.74 0.6171 9 Mapoly0037s0056 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H4 44.78 0.6308 10 Mapoly0113s0030 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [K14440] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12]; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [KOG1000] Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily; [PF00271] Helicase conserved C-terminal domain; [PTHR10799:SF43] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 46.69 0.5911 11 Mapoly0067s0103 - 50.94 0.4842 12 Mapoly0217s0011 - 55.99 0.4570 13 Mapoly0001s0530 [GO:0003677] DNA binding; [PF02151] UvrB/uvrC motif; [PF08755] Hemimethylated DNA-binding protein YccV like; [GO:0005515] protein binding; [PTHR31350] FAMILY NOT NAMED 59.79 0.5824 14 Mapoly0001s0311 [PTHR15131] SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1; [PF09808] Small nuclear RNA activating complex (SNAPc), subunit SNAP43 61.25 0.5811 15 Mapoly0015s0062 [GO:0006284] base-excision repair; [GO:0006289] nucleotide-excision repair; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [GO:0008270] zinc ion binding; [3.2.2.23] DNA-formamidopyrimidine glycosylase.; [GO:0003906] DNA-(apurinic or apyrimidinic site) lyase activity; [GO:0016799] hydrolase activity, hydrolyzing N-glycosyl compounds; [GO:0003684] damaged DNA binding; [PF06831] Formamidopyrimidine-DNA glycosylase H2TH domain; [PF01149] Formamidopyrimidine-DNA glycosylase N-terminal domain; [PTHR22993] FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE; [K10563] formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] 63.06 0.5601 16 Mapoly0022s0081 [PF05512] AWPM-19-like family 63.69 0.5683 17 Mapoly0009s0238 [PTHR31232] FAMILY NOT NAMED; [PF05938] Plant self-incompatibility protein S1 65.89 0.5624 18 Mapoly0039s0076 [PF04756] OST3 / OST6 family; [KOG3356] Predicted membrane protein; [PTHR13160] FAMILY NOT NAMED 66.15 0.5947 19 Mapoly0055s0042 - 72.55 0.4492 20 Mapoly0093s0012 [GO:0019139] cytokinin dehydrogenase activity; [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [GO:0050660] flavin adenine dinucleotide binding; [PTHR13878] GULONOLACTONE OXIDASE; [GO:0055114] oxidation-reduction process; [1.5.99.12] Cytokinin dehydrogenase.; [GO:0016491] oxidoreductase activity; [GO:0009690] cytokinin metabolic process; [K00279] cytokinin dehydrogenase [EC:1.5.99.12]; [PF09265] Cytokinin dehydrogenase 1, FAD and cytokinin binding; [KOG1231] Proteins containing the FAD binding domain; [PF01565] FAD binding domain 75.17 0.4686 21 Mapoly0001s0496 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity 75.76 0.5201 22 Mapoly0025s0126 [KOG4764] Uncharacterized conserved protein; [PF05160] DSS1/SEM1 family; [PTHR16771:SF0] SUBFAMILY NOT NAMED; [PTHR16771] 26 PROTEASOME COMPLEX SUBUNIT DSS1 75.95 0.5913 23 Mapoly0161s0023 [PTHR16119] FAMILY NOT NAMED; [PF07857] CEO family (DUF1632) 80.68 0.5581 24 Mapoly0056s0103 [2.4.1.15] Alpha,alpha-trehalose-phosphate synthase (UDP-forming).; [PF02358] Trehalose-phosphatase; [PTHR10788:SF6] TREHALOSE-6-PHOSPHATE SYNTHASE; [GO:0005992] trehalose biosynthetic process; [GO:0003824] catalytic activity; [KOG1050] Trehalose-6-phosphate synthase component TPS1 and related subunits; [K00697] alpha,alpha-trehalose-phosphate synthase (UDP-forming) [EC:2.4.1.15]; [PF00982] Glycosyltransferase family 20; [PTHR10788] TREHALOSE-6-PHOSPHATE SYNTHASE 82.38 0.5459 25 Mapoly0020s0073 [PF05602] Cleft lip and palate transmembrane protein 1 (CLPTM1); [PTHR21347] CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED; [KOG2489] Transmembrane protein; [PTHR21347:SF0] SUBFAMILY NOT NAMED 83.50 0.5726 26 Mapoly0046s0082 [GO:0000287] magnesium ion binding; [GO:0004743] pyruvate kinase activity; [GO:0006096] glycolysis; [GO:0030955] potassium ion binding; [PF02887] Pyruvate kinase, alpha/beta domain; [PF00224] Pyruvate kinase, barrel domain; [K00873] pyruvate kinase [EC:2.7.1.40]; [KOG2323] Pyruvate kinase; [PTHR11817] PYRUVATE KINASE; [2.7.1.40] Pyruvate kinase. 87.17 0.5316 27 Mapoly0035s0029 [PF10602] 26S proteasome subunit RPN7; [KOG0686] COP9 signalosome, subunit CSN1; [GO:0005515] protein binding; [PTHR14145] 26S PROTESOME SUBUNIT 6; [PTHR14145:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 1; [PF01399] PCI domain; [K12175] COP9 signalosome complex subunit 1 87.89 0.5802 28 Mapoly0039s0086 [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0006633] fatty acid biosynthetic process; [PF12076] WAX2 C-terminal domain; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [PTHR11863] STEROL DESATURASE 88.72 0.5762 29 Mapoly0091s0017 [GO:0005515] protein binding; [PTHR22937] RING FINGER CONTAINING PROTEIN; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [KOG2177] Predicted E3 ubiquitin ligase; [K11985] TRAF-interacting protein 88.90 0.5787 30 Mapoly0103s0067 [GO:0030599] pectinesterase activity; [PF01095] Pectinesterase; [GO:0042545] cell wall modification; [K01051] pectinesterase [EC:3.1.1.11]; [PTHR31321] FAMILY NOT NAMED; [3.1.1.11] Pectinesterase.; [GO:0005618] cell wall 90.71 0.5498 31 Mapoly0022s0108 [KOG1748] Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit; [PF00550] Phosphopantetheine attachment site; [1.6.99.3] NADH dehydrogenase.; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED; [K03955] NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1 [EC:1.6.5.3 1.6.99.3]; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating). 92.75 0.5887 32 Mapoly0043s0120 [K01527] nascent polypeptide-associated complex subunit beta; [PTHR10351] TRANSCRIPTION FACTOR BTF3; [KOG2240] RNA polymerase II general transcription factor BTF3 and related proteins; [PF01849] NAC domain 96.93 0.5867 33 Mapoly0014s0029 - 97.51 0.4625 34 Mapoly0014s0184 - 98.87 0.5709 35 Mapoly0052s0075 - 98.87 0.5089 36 Mapoly0008s0249 [PTHR21666] PEPTIDASE-RELATED; [PF01476] LysM domain; [PF01551] Peptidase family M23 99.45 0.5182 37 Mapoly0072s0010 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732:SF14] POTASSIUM CHANNEL BETA; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family 101.05 0.5222 38 Mapoly0058s0078 [2.8.1.2] 3-mercaptopyruvate sulfurtransferase.; [PTHR11364:SF0] THIOSULFATE SULFURTRANSFERASE; [KOG1529] Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase; [PF00581] Rhodanese-like domain; [K01011] thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]; [PTHR11364] THIOSULFATE SULFERTANSFERASE; [2.8.1.1] Thiosulfate sulfurtransferase. 107.42 0.5747 39 Mapoly0059s0052 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 110.20 0.5382 40 Mapoly0226s0004 [PTHR23316:SF1] gb def: Importin alpha-1 subunit (Karyopherin alpha-1 subunit); [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [PTHR23316] IMPORTIN ALPHA 111.85 0.5149 41 Mapoly0151s0039 [PTHR13345:SF2] NUT2; [KOG3046] Transcription factor, subunit of SRB subcomplex of RNA polymerase II; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [GO:0001104] RNA polymerase II transcription cofactor activity; [GO:0016592] mediator complex; [PF09748] Transcription factor subunit Med10 of Mediator complex; [PTHR13345] NUT2 AND UXT 118.83 0.5452 42 Mapoly0002s0197 [K03965] NADH dehydrogenase (ubiquinone) 1 beta subcomplex 9 [EC:1.6.5.3 1.6.99.3]; [1.6.99.3] NADH dehydrogenase.; [PF05347] Complex 1 protein (LYR family); [PTHR12868] NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT; [PTHR12868:SF0] SUBFAMILY NOT NAMED; [1.6.5.3] NADH:ubiquinone reductase (H(+)-translocating). 120.40 0.5746 43 Mapoly0004s0188 [GO:0005840] ribosome; [K02991] small subunit ribosomal protein S6e; [PTHR11502] 40S RIBOSOMAL PROTEIN S6; [KOG1646] 40S ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01092] Ribosomal protein S6e; [GO:0006412] translation 121.16 0.5738 44 Mapoly0128s0005 - 130.25 0.5166 45 Mapoly0052s0126 [K00162] pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]; [KOG0524] Pyruvate dehydrogenase E1, beta subunit; [1.2.4.1] Pyruvate dehydrogenase (acetyl-transferring).; [PTHR11624] DEHYDROGENASE RELATED; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [PF02780] Transketolase, C-terminal domain 131.23 0.5215 46 Mapoly0020s0070 - 131.87 0.4812 47 Mapoly0075s0080 [PF01545] Cation efflux family; [KOG1485] Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily); [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 132.30 0.5530 48 Mapoly0091s0038 [KOG3043] Predicted hydrolase related to dienelactone hydrolase; [GO:0016787] hydrolase activity; [PTHR17630] DIENELACTONE HYDROLASE; [PF01738] Dienelactone hydrolase family 133.57 0.5722 49 Mapoly0020s0172 - 133.60 0.4629 50 Mapoly0078s0018 [PTHR11005] LYSOSOMAL ACID LIPASE-RELATED; [PF04083] Partial alpha/beta-hydrolase lipase region; [KOG2624] Triglyceride lipase-cholesterol esterase; [PF12697] Alpha/beta hydrolase family; [GO:0006629] lipid metabolic process 136.54 0.4519