Guide Gene

Gene ID
Mapoly0186s0005
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K12184] ESCRT-I complex subunit VPS28; [PTHR12937] VACUOLAR PROTEIN SORTING 28, ISOFORM 2 (VPS28); [KOG3284] Vacuolar sorting protein VPS28; [PF03997] VPS28 protein

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0186s0005 [K12184] ESCRT-I complex subunit VPS28; [PTHR12937] VACUOLAR PROTEIN SORTING 28, ISOFORM 2 (VPS28); [KOG3284] Vacuolar sorting protein VPS28; [PF03997] VPS28 protein 0.00 1.0000
1 Mapoly0002s0208 [PF05207] CSL zinc finger; [KOG2923] Uncharacterized conserved protein; [PTHR21454] FAMILY NOT NAMED1.000.8390
2 Mapoly0086s0075 -2.000.7822
3 Mapoly0019s0018 -2.830.8071
4 Mapoly0049s0103 -3.740.7658
5 Mapoly0108s0049 [PF01585] G-patch domain; [GO:0003676] nucleic acid binding3.870.7833
6 Mapoly0019s0107 [KOG2358] NifU-like domain-containing proteins; [PTHR11178] IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED; [GO:0005506] iron ion binding; [GO:0051536] iron-sulfur cluster binding; [GO:0016226] iron-sulfur cluster assembly; [PF01106] NifU-like domain8.060.7798
7 Mapoly0049s0032 [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED10.000.7169
8 Mapoly0007s0154 -10.390.7620
9 Mapoly0063s0026 [GO:0009607] response to biotic stimulus; [PF00407] Pathogenesis-related protein Bet v I family; [GO:0006952] defense response10.390.7540
10 Mapoly0114s0019 [GO:0016020] membrane; [KOG1617] CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase; [GO:0008654] phospholipid biosynthetic process; [GO:0016780] phosphotransferase activity, for other substituted phosphate groups; [PTHR14269] CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED; [2.7.8.5] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.; [K00995] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]; [PF01066] CDP-alcohol phosphatidyltransferase10.720.7266
11 Mapoly0015s0072 -10.950.7593
12 Mapoly0001s0484 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [PTHR23135:SF3] UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE--D-ALANYL-D- ALANYL LIGASE; [GO:0005737] cytoplasm; [GO:0016874] ligase activity; [GO:0009058] biosynthetic process; [PF01225] Mur ligase family, catalytic domain; [PF02875] Mur ligase family, glutamate ligase domain; [PTHR23135] MUR LIGASE FAMILY MEMBER; [GO:0008360] regulation of cell shape; [GO:0008766] UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity; [GO:0051301] cell division11.490.7574
13 Mapoly0002s0118 [KOG0715] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PTHR24076] FAMILY NOT NAMED12.000.7632
14 Mapoly0002s0283 -13.110.6409
15 Mapoly0005s0007 [KOG0090] Signal recognition particle receptor, beta subunit (small G protein superfamily); [PF09439] Signal recognition particle receptor beta subunit; [PTHR19326] SIGNAL RECOGNITION PARTICLE RECEPTOR BETA SUBUNIT RELATED; [K12272] signal recognition particle receptor subunit beta13.490.7126
16 Mapoly0083s0065 [PF09366] Protein of unknown function (DUF1997)14.280.7350
17 Mapoly0001s0103 [GO:0009055] electron carrier activity; [GO:0015035] protein disulfide oxidoreductase activity; [KOG0911] Glutaredoxin-related protein; [GO:0045454] cell redox homeostasis; [PTHR10293] GLUTAREDOXIN-RELATED PROTEIN; [PF00462] Glutaredoxin; [PTHR10293:SF16] GLUTAREDOXIN-RELATED PROTEIN18.000.7668
18 Mapoly0004s0230 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR13355] GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE; [PTHR13355:SF2] gb def: acetyltransferase (gnat) family [caenorhabditis elegans]18.170.6512
19 Mapoly0007s0264 -18.330.6710
20 Mapoly0113s0013 [KOG0747] Putative NAD+-dependent epimerases; [PTHR10491:SF4] DTDP-4-DEHYDRORHAMNOSE DEHYDROGENASE RELATED; [GO:0008831] dTDP-4-dehydrorhamnose reductase activity; [GO:0045226] extracellular polysaccharide biosynthetic process; [PTHR10491] DTDP-4-DEHYDRORHAMNOSE REDUCTASE; [PF04321] RmlD substrate binding domain18.330.6656
21 Mapoly0093s0077 [GO:0016020] membrane; [GO:0017004] cytochrome complex assembly; [GO:0055114] oxidation-reduction process; [PTHR31272] FAMILY NOT NAMED; [PF02683] Cytochrome C biogenesis protein transmembrane region18.710.7453
22 Mapoly0007s0051 [PF12937] F-box-like; [GO:0005515] protein binding19.900.7268
23 Mapoly0060s0085 [PTHR14110:SF1] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22; [KOG1652] Mitochondrial import inner membrane translocase, subunit TIM17; [PF02466] Tim17/Tim22/Tim23/Pmp24 family; [PTHR14110] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM2220.350.7348
24 Mapoly0140s0015 [GO:0016021] integral to membrane; [PF01679] Proteolipid membrane potential modulator; [PTHR21659] HYDROPHOBIC PROTEIN RCI2 (LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6)-RELATED; [KOG1773] Stress responsive protein20.490.6804
25 Mapoly0011s0173 -22.910.7272
26 Mapoly0124s0019 [GO:0016020] membrane; [GO:0035556] intracellular signal transduction; [PF03311] Cornichon protein; [PTHR12290] CORNICHON-RELATED; [KOG2729] ER vesicle integral membrane protein involved in establishing cell polarity, signaling and protein degradation29.290.6020
27 Mapoly0037s0059 -29.850.6418
28 Mapoly0151s0020 [KOG3446] NADH:ubiquinone oxidoreductase NDUFA2/B8 subunit; [PF10780] 39S ribosomal protein L53/MRP-L5330.850.6941
29 Mapoly0008s0040 [GO:0016020] membrane; [PF01569] PAP2 superfamily; [KOG3146] Dolichyl pyrophosphate phosphatase and related acid phosphatases; [PTHR11247] PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1; [GO:0003824] catalytic activity32.910.6649
30 Mapoly0101s0026 -34.210.7534
31 Mapoly0006s0182 [PTHR21377] UNCHARACTERIZED; [PF06916] Protein of unknown function (DUF1279); [PTHR21377:SF0] SUBFAMILY NOT NAMED; [KOG4526] Predicted membrane protein35.330.7351
32 Mapoly0083s0006 [KOG3798] Predicted Zn-dependent hydrolase (beta-lactamase superfamily); [PTHR15032] FAMILY NOT NAMED; [PF12706] Beta-lactamase superfamily domain; [3.1.4.-] Phosphoric diester hydrolases.; [K13985] N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D [EC:3.1.4.-]35.680.6509
33 Mapoly0044s0050 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding36.650.6426
34 Mapoly0147s0009 -38.250.7313
35 Mapoly0058s0041 [PTHR23309] 3-HYDROXYACYL-COA DEHYROGENASE; [K00074] 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]; [GO:0055114] oxidation-reduction process; [KOG2304] 3-hydroxyacyl-CoA dehydrogenase; [GO:0006631] fatty acid metabolic process; [1.1.1.157] 3-hydroxybutyryl-CoA dehydrogenase.; [GO:0016491] oxidoreductase activity; [PF00725] 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; [PF02737] 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; [GO:0003857] 3-hydroxyacyl-CoA dehydrogenase activity41.860.6486
36 Mapoly0132s0020 -42.070.7032
37 Mapoly0022s0149 [2.3.1.-] Transferring groups other than amino-acyl groups.; [PF01553] Acyltransferase; [K13523] lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase [EC:2.3.1.51 2.3.1.-]; [2.3.1.51] 1-acylglycerol-3-phosphate O-acyltransferase.; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [PTHR10983] 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED; [KOG1505] Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases42.900.6369
38 Mapoly0025s0056 [PF09791] Oxidoreductase-like protein, N-terminal43.590.7297
39 Mapoly0002s0003 -44.600.6689
40 Mapoly0036s0048 -45.170.7415
41 Mapoly0032s0107 -45.890.6661
42 Mapoly0019s0104 [GO:0003919] FMN adenylyltransferase activity; [PF06574] FAD synthetase; [GO:0009231] riboflavin biosynthetic process; [PTHR12714] PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE46.480.6486
43 Mapoly0027s0034 [PF02991] Autophagy protein Atg8 ubiquitin like; [PTHR10969] MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED; [KOG1654] Microtubule-associated anchor protein involved in autophagy and membrane trafficking46.620.6671
44 Mapoly0024s0084 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0076] GTP-binding ADP-ribosylation factor-like protein yARL3; [PTHR11711:SF19] ARF-RELATED PROTEIN 1, ARFRP1; [GO:0005525] GTP binding46.640.7066
45 Mapoly0003s0045 [KOG2887] Membrane protein involved in ER to Golgi transport; [GO:0016192] vesicle-mediated transport; [PTHR23137] UNCHARACTERIZED; [GO:0016021] integral to membrane; [GO:0006810] transport; [PF04178] Got1/Sft2-like family49.320.6534
46 Mapoly0162s0011 [PTHR12626:SF1] PDCD4-RELATED; [PTHR12626] PROGRAMMED CELL DEATH 449.750.6975
47 Mapoly0087s0072 -52.250.6933
48 Mapoly0080s0067 [PTHR19332] PEROXISOMAL MEMBRANE PROTEIN PEX1352.960.6409
49 Mapoly3327s0001 -55.240.6274
50 Mapoly0109s0048 [KOG0710] Molecular chaperone (small heat-shock protein Hsp26/Hsp42); [PTHR11527] SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY; [PF00011] Hsp20/alpha crystallin family57.240.6685
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