Guide Gene

Gene ID
Mapoly0146s0022
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG2553] Pseudouridylate synthase; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0146s0022 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG2553] Pseudouridylate synthase; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity 0.00 1.0000
1 Mapoly0021s0094 [PTHR24322] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase; [KOG1014] 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B36.780.6564
2 Mapoly0009s0223 [GO:0005524] ATP binding; [GO:0009396] folic acid-containing compound biosynthetic process; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF01268] Formate--tetrahydrofolate ligase; [GO:0004329] formate-tetrahydrofolate ligase activity7.750.5901
3 Mapoly0005s0139 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P450; [PTHR24286] FAMILY NOT NAMED11.660.6080
4 Mapoly0014s0108 -14.320.6762
5 Mapoly0085s0017 [PF00280] Potato inhibitor I family; [GO:0009611] response to wounding; [GO:0004867] serine-type endopeptidase inhibitor activity14.460.5611
6 Mapoly0055s0056 -17.460.6070
7 Mapoly0026s0146 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00332] Glycosyl hydrolases family 1721.350.5594
8 Mapoly0136s0025 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR31677] FAMILY NOT NAMED; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity22.580.5553
9 Mapoly0137s0029 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR10742:SF30] AMINE OXIDASE; [KOG0029] Amine oxidase24.860.6256
10 Mapoly0037s0131 -29.460.5834
11 Mapoly0038s0088 [PF04674] Phosphate-induced protein 1 conserved region; [PTHR31279] FAMILY NOT NAMED33.360.5461
12 Mapoly0027s0172 -45.520.5572
13 Mapoly0080s0012 -48.770.5579
14 Mapoly0126s0041 [PTHR31723] FAMILY NOT NAMED64.580.5560
15 Mapoly0027s0163 -64.830.5710
16 Mapoly0016s0095 [PTHR21631] ISOCITRATE LYASE/MALATE SYNTHASE; [PF13714] Phosphoenolpyruvate phosphomutase69.340.5791
17 Mapoly0081s0008 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [K00487] trans-cinnamate 4-monooxygenase [EC:1.14.13.11]; [PF00067] Cytochrome P450; [1.14.13.11] Trans-cinnamate 4-monooxygenase.72.830.5426
18 Mapoly0015s0205 [PTHR12770] FAMILY NOT NAMED; [PTHR12770:SF5] SUBFAMILY NOT NAMED; [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein73.650.5554
19 Mapoly0046s0056 [GO:0009055] electron carrier activity; [KOG3309] Ferredoxin; [PF00111] 2Fe-2S iron-sulfur cluster binding domain; [GO:0051536] iron-sulfur cluster binding; [PTHR23426] FERREDOXIN/ADRENODOXIN75.050.4948
20 Mapoly0055s0009 [KOG1722] 60s ribosomal protein L24; [K02896] large subunit ribosomal protein L24e; [PF01246] Ribosomal protein L24e; [PTHR10792] 60S RIBOSOMAL PROTEIN L2476.420.5658
21 Mapoly0009s0232 -78.130.5296
22 Mapoly0027s0162 -85.910.5533
23 Mapoly0112s0021 [GO:0055114] oxidation-reduction process; [PF00180] Isocitrate/isopropylmalate dehydrogenase; [K00031] isocitrate dehydrogenase [EC:1.1.1.42]; [GO:0006102] isocitrate metabolic process; [1.1.1.42] Isocitrate dehydrogenase (NADP(+)).; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0004450] isocitrate dehydrogenase (NADP+) activity; [KOG1526] NADP-dependent isocitrate dehydrogenase; [PTHR11822] NADP-SPECIFIC ISOCITRATE DEHYDROGENASE90.000.4879
24 Mapoly0015s0135 -92.910.4168
25 Mapoly0027s0161 -94.130.5478
26 Mapoly0009s0125 [GO:0016020] membrane; [PTHR31218] FAMILY NOT NAMED; [PF00892] EamA-like transporter family96.420.4859
27 Mapoly0065s0057 [PF12138] Spherulation-specific family 4100.080.5425
28 Mapoly0054s0048 [KOG3217] Protein tyrosine phosphatase; [PTHR11717] LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE; [PTHR11717:SF12] LOW MOLECULAR WEIGHT PROTEIN-TYROSINE-PHOSPHATASE 1; [PF01451] Low molecular weight phosphotyrosine protein phosphatase101.760.5521
29 Mapoly0177s0014 [GO:0016762] xyloglucan:xyloglucosyl transferase activity; [GO:0048046] apoplast; [GO:0006073] cellular glucan metabolic process; [PTHR31062] FAMILY NOT NAMED; [PF06955] Xyloglucan endo-transglycosylase (XET) C-terminus; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00722] Glycosyl hydrolases family 16; [2.4.1.207] Xyloglucan:xyloglucosyl transferase.; [K08235] xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]; [GO:0005618] cell wall107.780.4794
30 Mapoly0007s0126 [PF00139] Legume lectin domain; [GO:0030246] carbohydrate binding109.950.4896
31 Mapoly0162s0003 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR31429] FAMILY NOT NAMED; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF03106] WRKY DNA -binding domain109.980.4982
32 Mapoly0206s0001 [PF12142] Polyphenol oxidase middle domain; [PF00264] Common central domain of tyrosinase; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219)117.500.4962
33 Mapoly0146s0038 [PF11937] Protein of unknown function (DUF3455)118.960.4828
34 Mapoly0128s0018 -121.240.5309
35 Mapoly0027s0164 -121.420.5207
36 Mapoly0003s0142 [GO:0006355] regulation of transcription, DNA-dependent; [PF02357] Transcription termination factor nusG; [PTHR30265] RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG124.320.5448
37 Mapoly0093s0079 -126.120.5457
38 Mapoly0011s0161 [GO:0003677] DNA binding; [PTHR11945] MADS BOX PROTEIN; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0046983] protein dimerization activity; [PF01486] K-box region; [GO:0003700] sequence-specific DNA binding transcription factor activity; [KOG0014] MADS box transcription factor; [K09264] MADS-box transcription factor, plant; [GO:0005634] nucleus; [PF00319] SRF-type transcription factor (DNA-binding and dimerisation domain)132.200.4322
39 Mapoly0095s0002 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [PTHR24031:SF35] DEAD/DEAH BOX HELICASE, PUTATIVE (MITOCHONDRIAL); [GO:0003676] nucleic acid binding136.660.5451
40 Mapoly0121s0042 [GO:0030833] regulation of actin filament polymerization; [GO:0034314] Arp2/3 complex-mediated actin nucleation; [GO:0005524] ATP binding; [GO:0005856] cytoskeleton; [PF00022] Actin; [GO:0005885] Arp2/3 protein complex; [KOG0678] Actin-related protein Arp2/3 complex, subunit Arp3; [PTHR11937:SF31] ACTIN-LIKE PROTEIN 3, ACL3; [PTHR11937] ACTIN136.970.4910
41 Mapoly0051s0063 [GO:0016020] membrane; [PTHR22911] ACYL-MALONYL CONDENSING ENZYME-RELATED; [KOG1441] Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter; [PF00892] EamA-like transporter family140.840.5357
42 Mapoly0887s0001 -142.370.5241
43 Mapoly0090s0073 -147.890.5124
44 Mapoly0014s0218 -148.450.5410
45 Mapoly0058s0056 -149.240.5214
46 Mapoly0121s0002 -156.000.4452
47 Mapoly0030s0074 [KOG3801] Uncharacterized conserved protein BCN92; [PTHR13166] PROTEIN C6ORF149; [PF05347] Complex 1 protein (LYR family)161.790.5447
48 Mapoly0080s0008 [PF01757] Acyltransferase family; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups164.160.4713
49 Mapoly0126s0014 [PF00132] Bacterial transferase hexapeptide (six repeats); [2.3.1.-] Transferring groups other than amino-acyl groups.; [PTHR23416:SF23] NODULATION PROTEIN L; [GO:0016407] acetyltransferase activity; [KOG4750] Serine O-acetyltransferase; [PTHR23416] SIALIC ACID SYNTHASE-RELATED; [K00680] phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158]; [PF12464] Maltose acetyltransferase164.160.5245
50 Mapoly0027s0166 -165.030.5130
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