Guide Gene

Gene ID
Mapoly0140s0008
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005097] Rab GTPase activator activity; [KOG4567] GTPase-activating protein; [PTHR22957:SF27] TBC1 DOMAIN FAMILY MEMBER 13; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0140s0008 [GO:0005097] Rab GTPase activator activity; [KOG4567] GTPase-activating protein; [PTHR22957:SF27] TBC1 DOMAIN FAMILY MEMBER 13; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain 0.00 1.0000
1 Mapoly0029s0011 [KOG3574] Acetyl-CoA transporter; [PF03092] BT1 family; [PTHR31585] FAMILY NOT NAMED; [PTHR31585:SF0] SUBFAMILY NOT NAMED2.000.7436
2 Mapoly0096s0071 -8.250.7392
3 Mapoly0020s0112 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family11.660.6584
4 Mapoly0004s0040 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity16.730.7074
5 Mapoly0036s0049 [PTHR31718] FAMILY NOT NAMED; [PF06232] Embryo-specific protein 3, (ATS3)19.240.7151
6 Mapoly0040s0077 -19.490.6723
7 Mapoly0004s0132 -20.780.6997
8 Mapoly0026s0124 [KOG1603] Copper chaperone; [GO:0030001] metal ion transport; [PTHR22814] COPPER TRANSPORT PROTEIN ATOX1-RELATED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding21.630.6332
9 Mapoly0019s0132 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0006468] protein phosphorylation; [GO:0003824] catalytic activity; [KOG0594] Protein kinase PCTAIRE and related kinases21.730.7313
10 Mapoly0001s0194 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [K14436] chromodomain-helicase-DNA-binding protein 6 [EC:3.6.4.12]; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain; [PTHR10799:SF182] CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN; [PF00176] SNF2 family N-terminal domain; [3.6.4.12] DNA helicase.; [PF00271] Helicase conserved C-terminal domain; [KOG0384] Chromodomain-helicase DNA-binding protein21.980.7356
11 Mapoly0001s0483 [PTHR31447] FAMILY NOT NAMED; [KOG4176] Uncharacterized conserved protein; [PF13532] 2OG-Fe(II) oxygenase superfamily25.140.7044
12 Mapoly0001s0062 [KOG3385] V-SNARE; [K08506] syntaxin of plants SYP7; [GO:0005515] protein binding; [PTHR12380:SF19] SUBFAMILY NOT NAMED; [PTHR12380] SYNTAXIN; [PF05739] SNARE domain27.390.7102
13 Mapoly0011s0007 -28.530.6926
14 Mapoly0020s0069 [GO:0003677] DNA binding; [PTHR11239:SF1] DNA-DIRECTED RNA POLYMERASE II; [KOG2691] RNA polymerase II subunit 9; [PF02150] RNA polymerases M/15 Kd subunit; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11239] DNA-DIRECTED RNA POLYMERASE28.810.6941
15 Mapoly0080s0074 -31.370.6918
16 Mapoly0130s0023 [PF13837] Myb/SANT-like DNA-binding domain31.450.6696
17 Mapoly0067s0050 -31.940.6808
18 Mapoly0199s0010 [PF00188] Cysteine-rich secretory protein family; [PTHR10334] CYSTEINE-RICH SECRETORY PROTEIN-RELATED32.470.6754
19 Mapoly0004s0298 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE36.120.6632
20 Mapoly0014s0037 [PTHR22850] WD40 REPEAT FAMILY38.570.6622
21 Mapoly0003s0221 [GO:0016020] membrane; [PTHR10027] CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN; [PTHR10027:SF10] CATION CHANNEL FAMILY PROTEIN-RELATED; [PF00520] Ion transport protein; [GO:0006813] potassium ion transport; [GO:0055085] transmembrane transport; [GO:0015269] calcium-activated potassium channel activity; [PF03493] Calcium-activated BK potassium channel alpha subunit; [GO:0006811] ion transport; [GO:0005216] ion channel activity38.880.6083
22 Mapoly0036s0052 [PTHR31718] FAMILY NOT NAMED; [PF06232] Embryo-specific protein 3, (ATS3)41.130.6744
23 Mapoly0030s0123 [PF03083] Sugar efflux transporter for intercellular exchange; [KOG1623] Multitransmembrane protein; [PTHR10791] RAG1-ACTIVATING PROTEIN 142.730.6709
24 Mapoly0074s0057 [GO:0016020] membrane; [KOG3810] Micronutrient transporters (folate transporter family); [PF01770] Reduced folate carrier; [PTHR10686] FOLATE TRANSPORTER; [GO:0006810] transport42.900.6329
25 Mapoly0019s0170 [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0006633] fatty acid biosynthetic process; [PF12076] WAX2 C-terminal domain; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [PTHR11863] STEROL DESATURASE42.990.6639
26 Mapoly0052s0078 [KOG2042] Ubiquitin fusion degradation protein-2; [GO:0016567] protein ubiquitination; [PF10408] Ubiquitin elongating factor core; [PTHR13931] UBIQUITINATION FACTOR E4; [GO:0034450] ubiquitin-ubiquitin ligase activity; [GO:0006511] ubiquitin-dependent protein catabolic process; [6.3.2.19] Ubiquitin--protein ligase.; [GO:0004842] ubiquitin-protein ligase activity; [GO:0000151] ubiquitin ligase complex; [PF04564] U-box domain; [K10597] ubiquitin conjugation factor E4 B [EC:6.3.2.19]; [PTHR13931:SF2] UBIQUITINATION FACTOR E4B/UFD2(YEAST)44.090.6685
27 Mapoly0053s0006 [GO:0000287] magnesium ion binding; [PTHR24092] FAMILY NOT NAMED; [GO:0005524] ATP binding; [PF12710] haloacid dehalogenase-like hydrolase; [KOG0206] P-type ATPase; [GO:0000166] nucleotide binding; [GO:0015914] phospholipid transport; [GO:0016021] integral to membrane; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [GO:0004012] phospholipid-translocating ATPase activity44.720.6796
28 Mapoly0009s0092 -47.480.6488
29 Mapoly0019s0053 -47.490.6535
30 Mapoly0188s0017 [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)47.750.6723
31 Mapoly0068s0094 -47.900.6549
32 Mapoly0105s0062 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity49.360.6873
33 Mapoly0065s0086 [PTHR22069:SF0] SUBFAMILY NOT NAMED; [PTHR22069] MITOCHONDRIAL RIBOSOMAL PROTEIN S1850.910.6663
34 Mapoly0009s0028 [PTHR22812] CHROMOBOX PROTEIN; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain50.990.6890
35 Mapoly0010s0002 [GO:0016020] membrane; [KOG2431] 1, 2-alpha-mannosidase; [K01230] mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]; [PTHR11742:SF7] ENDOPLASMIC RETICULUM MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0005509] calcium ion binding; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [PF01532] Glycosyl hydrolase family 47; [3.2.1.113] Mannosyl-oligosaccharide 1,2-alpha-mannosidase.51.990.6474
36 Mapoly0031s0056 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00332] Glycosyl hydrolases family 1755.810.6285
37 Mapoly0001s0321 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [KOG0029] Amine oxidase56.120.6399
38 Mapoly0004s0265 -56.570.6544
39 Mapoly0110s0025 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding57.010.6678
40 Mapoly0076s0044 [PF13867] Sin3 binding region of histone deacetylase complex subunit SAP30; [GO:0005515] protein binding; [PTHR13286] SAP3058.790.6615
41 Mapoly0031s0051 -60.330.6584
42 Mapoly0005s0079 [PTHR22997] UNCHARACTERIZED; [PF08190] pre-RNA processing PIH1/Nop1760.620.6720
43 Mapoly0045s0046 -61.820.6521
44 Mapoly0115s0002 -63.710.6598
45 Mapoly0005s0244 [KOG4536] Predicted membrane protein; [PF10160] Predicted membrane protein; [PTHR15876] FAMILY NOT NAMED63.990.6496
46 Mapoly0023s0069 [GO:0006308] DNA catabolic process; [PF02265] S1/P1 Nuclease; [GO:0003676] nucleic acid binding; [GO:0004519] endonuclease activity65.530.6547
47 Mapoly0106s0041 [PF00933] Glycosyl hydrolase family 3 N terminal domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR30620] PERIPLASMIC BETA-GLUCOSIDASE-RELATED; [PF01915] Glycosyl hydrolase family 3 C-terminal domain72.630.6682
48 Mapoly0040s0034 [KOG4742] Predicted chitinase; [GO:0006032] chitin catabolic process; [GO:0004568] chitinase activity; [PTHR22595] CHITINASE-RELATED; [GO:0016998] cell wall macromolecule catabolic process; [PF00182] Chitinase class I73.860.6405
49 Mapoly0001s0167 [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [PF05188] MutS domain II; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [PTHR11361:SF21] MUTS HOMOLOG 4, MSH4; [K08740] DNA mismatch repair protein MSH4; [PF05192] MutS domain III; [PF05190] MutS family domain IV74.670.6315
50 Mapoly0006s0068 [KOG3219] Transcription initiation factor TFIID, subunit TAF11; [PTHR13218] FAMILY NOT NAMED; [GO:0005634] nucleus; [K03135] transcription initiation factor TFIID subunit 11; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PF04719] hTAFII28-like protein conserved region74.830.5918
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