Guide Gene

Gene ID
Mapoly0140s0003
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0015099] nickel cation transmembrane transporter activity; [GO:0016021] integral to membrane; [GO:0035444] nickel cation transmembrane transport; [PF03824] High-affinity nickel-transport protein; [GO:0046872] metal ion binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0140s0003 [GO:0015099] nickel cation transmembrane transporter activity; [GO:0016021] integral to membrane; [GO:0035444] nickel cation transmembrane transport; [PF03824] High-affinity nickel-transport protein; [GO:0046872] metal ion binding 0.00 1.0000
1 Mapoly0112s0033 [KOG0978] E3 ubiquitin ligase involved in syntaxin degradation; [PTHR13140] MYOSIN1.000.7938
2 Mapoly0091s0083 [GO:0003723] RNA binding; [PTHR13452:SF6] TRNA ACETYLTRANSFERASE TAN1; [PTHR13452] THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; [PF02926] THUMP domain; [K06963] ribosomal RNA assembly protein10.390.6916
3 Mapoly0036s0021 [GO:0080048] GDP-D-glucose phosphorylase activity; [K14190] GDP-L-galactose phosphorylase [EC:2.7.7.69]; [PTHR20884] FAMILY NOT NAMED; [KOG2720] Predicted hydrolase (HIT family); [2.7.7.69] GDP-L-galactose phosphorylase.12.960.6452
4 Mapoly0110s0012 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [PF00012] Hsp70 protein; [KOG0102] Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily16.730.6535
5 Mapoly0048s0025 [PF00091] Tubulin/FtsZ family, GTPase domain; [PTHR30314] CELL DIVISION PROTEIN FTSZ-RELATED; [PF12327] FtsZ family, C-terminal domain19.600.6548
6 Mapoly0056s0020 [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [GO:0005525] GTP binding20.710.6736
7 Mapoly0083s0034 -37.630.6503
8 Mapoly0065s0091 [2.1.1.127] [Ribulose-bisphosphate carboxylase]-lysine N-methyltransferase.; [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding; [K00592] [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127]43.710.5847
9 Mapoly0014s0153 [PTHR23091:SF4] N-TERMINAL ACETYLTRANSFERASE COMPLEX ARD1 SUBUNIT; [GO:0008080] N-acetyltransferase activity; [KOG3235] Subunit of the major N alpha-acetyltransferase; [K00670] peptide alpha-N-acetyltransferase [EC:2.3.1.88]; [PF00583] Acetyltransferase (GNAT) family; [2.3.1.88] Peptide alpha-N-acetyltransferase.; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE43.820.6308
10 Mapoly0031s0052 -45.830.6050
11 Mapoly0139s0003 [PF11523] Protein of unknown function (DUF3223)46.670.6304
12 Mapoly0050s0059 [PF07876] Stress responsive A/B Barrel Domain52.380.6382
13 Mapoly0022s0038 [4.2.1.-] Hydro-lyases.; [K02372] 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; [PTHR30272] (3R)-HYDROXYMYRISTOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE; [PF07977] FabA-like domain54.910.6310
14 Mapoly0028s0114 [K14565] nucleolar protein 58; [PF01798] Putative snoRNA binding domain; [PF08060] NOSIC (NUC001) domain; [PTHR10894:SF1] NUCLEOLAR PROTEIN NOP56-RELATED; [PF08156] NOP5NT (NUC127) domain; [KOG2572] Ribosome biogenesis protein - Nop58p/Nop5p; [PTHR10894] NUCLEOLAR PROTEIN 5 (NUCLEOLAR PROTEIN NOP5)(NOP58)55.750.6263
15 Mapoly0035s0057 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [K08869] aarF domain-containing kinase62.450.5633
16 Mapoly0005s0130 [GO:0042393] histone binding; [PF02182] SAD/SRA domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR14140] E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED70.200.6204
17 Mapoly0026s0070 [PTHR25040] FAMILY NOT NAMED; [KOG0724] Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR25040:SF70] SUBFAMILY NOT NAMED73.480.5951
18 Mapoly0016s0067 [GO:0005524] ATP binding; [PTHR31187:SF0] SUBFAMILY NOT NAMED; [GO:0005471] ATP:ADP antiporter activity; [K03301] ATP:ADP antiporter, AAA family; [GO:0016021] integral to membrane; [PTHR31187] FAMILY NOT NAMED; [GO:0006810] transport; [PF03219] TLC ATP/ADP transporter73.860.5715
19 Mapoly0132s0028 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [KOG1653] Single-stranded DNA-binding protein; [PF00436] Single-strand binding protein family; [K03111] single-strand DNA-binding protein79.320.6047
20 Mapoly0023s0178 [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0000166] nucleotide binding; [K01866] tyrosyl-tRNA synthetase [EC:6.1.1.1]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [6.1.1.1] Tyrosine--tRNA ligase.; [KOG2144] Tyrosyl-tRNA synthetase, cytoplasmic; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity82.340.5996
21 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing85.120.6184
22 Mapoly0026s0044 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [K13789] geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.1] Dimethylallyltranstransferase.; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.10] (2E,6E)-farnesyl diphosphate synthase.; [PTHR12001:SF23] SUBFAMILY NOT NAMED; [2.5.1.29] Geranylgeranyl diphosphate synthase.85.700.6219
23 Mapoly0162s0018 [GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation; [PTHR11229:SF0] SUBFAMILY NOT NAMED87.350.5971
24 Mapoly0036s0111 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR12029] RNA METHYLTRANSFERASE; [PF00588] SpoU rRNA Methylase family; [GO:0008173] RNA methyltransferase activity; [KOG2506] SpoU rRNA Methylase family protein88.450.5847
25 Mapoly0040s0008 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [PF01103] Surface antigen88.950.6077
26 Mapoly0037s0052 [1.3.1.9] Enoyl-[acyl-carrier-protein] reductase (NADH).; [PTHR24322] FAMILY NOT NAMED; [PF13561] Enoyl-(Acyl carrier protein) reductase; [KOG0725] Reductases with broad range of substrate specificities; [K00208] enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]90.050.5833
27 Mapoly0063s0085 [KOG3655] Drebrins and related actin binding proteins; [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [PF11886] Domain of unknown function (DUF3406); [GO:0005525] GTP binding90.810.5921
28 Mapoly0111s0026 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K03768] peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0880] Peptidyl-prolyl cis-trans isomerase92.660.6134
29 Mapoly0044s0089 [PF13578] Methyltransferase domain92.950.5571
30 Mapoly0014s0105 -93.720.6068
31 Mapoly0003s0042 [GO:0016597] amino acid binding; [PF02729] Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; [2.1.3.3] Ornithine carbamoyltransferase.; [GO:0016743] carboxyl- or carbamoyltransferase activity; [K00611] ornithine carbamoyltransferase [EC:2.1.3.3]; [GO:0006520] cellular amino acid metabolic process; [PTHR11405] CARBAMOYLTRANSFERASE RELATED; [KOG1504] Ornithine carbamoyltransferase OTC/ARG3; [PF00185] Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain94.920.5599
32 Mapoly0020s0152 [PTHR17130] MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25; [PF13414] TPR repeat96.520.6142
33 Mapoly0040s0027 -96.990.4555
34 Mapoly0002s0035 -97.100.6102
35 Mapoly0084s0048 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [KOG0552] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [PF03066] Nucleoplasmin97.280.6013
36 Mapoly0007s0190 [PTHR12830] FAMILY NOT NAMED; [PTHR12830:SF9] SUBFAMILY NOT NAMED; [PF12862] Anaphase-promoting complex subunit 5; [K03352] anaphase-promoting complex subunit 5; [KOG4322] Anaphase-promoting complex (APC), subunit 598.260.5660
37 Mapoly0040s0082 [PF00091] Tubulin/FtsZ family, GTPase domain; [PTHR30314] CELL DIVISION PROTEIN FTSZ-RELATED; [PF12327] FtsZ family, C-terminal domain101.730.5837
38 Mapoly0012s0037 [PTHR11751:SF22] AMINOTRANSFERASE RELATED; [GO:0009058] biosynthetic process; [K10206] LL-diaminopimelate aminotransferase [EC:2.6.1.83]; [GO:0030170] pyridoxal phosphate binding; [2.6.1.83] LL-diaminopimelate aminotransferase.; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [GO:0009089] lysine biosynthetic process via diaminopimelate; [GO:0010285] L,L-diaminopimelate aminotransferase activity; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED105.790.5995
39 Mapoly0065s0080 -106.280.6160
40 Mapoly0052s0126 [K00162] pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]; [KOG0524] Pyruvate dehydrogenase E1, beta subunit; [1.2.4.1] Pyruvate dehydrogenase (acetyl-transferring).; [PTHR11624] DEHYDROGENASE RELATED; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [PF02780] Transketolase, C-terminal domain115.280.5519
41 Mapoly0076s0001 [PF03109] ABC1 family; [KOG1236] Predicted unusual protein kinase; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [PTHR10566:SF6] BETA-LACTAMASE-RELATED115.590.5972
42 Mapoly0007s0079 [KOG1308] Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein; [PTHR22904] TPR REPEAT CONTAINING PROTEIN117.930.6132
43 Mapoly0153s0017 [PTHR12860] SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN; [KOG2460] Signal recognition particle, subunit Srp68; [K03107] signal recognition particle subunit SRP68118.000.5714
44 Mapoly0148s0041 [PTHR24312] FAMILY NOT NAMED; [KOG1200] Mitochondrial/plastidial beta-ketoacyl-ACP reductase; [GO:0016491] oxidoreductase activity; [PTHR24312:SF0] SUBFAMILY NOT NAMED; [GO:0008152] metabolic process; [1.1.1.100] 3-oxoacyl-[acyl-carrier-protein] reductase.; [K00059] 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]; [PF00106] short chain dehydrogenase118.290.5874
45 Mapoly0052s0055 [GO:0016020] membrane; [GO:0005452] inorganic anion exchanger activity; [K13857] solute carrier family 4 (sodium bicarbonate cotransporter), member 5; [GO:0016021] integral to membrane; [GO:0006820] anion transport; [PF00955] HCO3- transporter family; [PTHR11453] ANION EXCHANGE PROTEIN119.540.5980
46 Mapoly0022s0159 -122.490.5334
47 Mapoly0154s0021 [GO:0003723] RNA binding; [PTHR23253] EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; [PF02854] MIF4G domain; [GO:0005515] protein binding; [KOG0401] Translation initiation factor 4F, ribosome/mRNA-bridging subunit (eIF-4G); [K03260] translation initiation factor eIF-4F; [PF02847] MA3 domain122.980.5639
48 Mapoly0068s0019 [PTHR11540:SF14] L-LACTATE DEHYDROGENASE; [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [KOG1494] NAD-dependent malate dehydrogenase; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR11540] MALATE AND LACTATE DEHYDROGENASE; [GO:0044262] cellular carbohydrate metabolic process; [1.1.1.37] Malate dehydrogenase.; [K00026] malate dehydrogenase [EC:1.1.1.37]123.490.5503
49 Mapoly0035s0034 [K01939] adenylosuccinate synthase [EC:6.3.4.4]; [KOG1355] Adenylosuccinate synthase; [PF00709] Adenylosuccinate synthetase; [PTHR11846:SF0] ADENYLOSUCCINATE SYNTHETASE; [6.3.4.4] Adenylosuccinate synthase.; [PTHR11846] ADENYLOSUCCINATE SYNTHETASE; [GO:0006164] purine nucleotide biosynthetic process; [GO:0005525] GTP binding; [GO:0004019] adenylosuccinate synthase activity125.890.6028
50 Mapoly0005s0054 [GO:0003913] DNA photolyase activity; [PTHR11455] CRYPTOCHROME; [PF00875] DNA photolyase; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair126.030.6096
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