Guide Gene

Gene ID
Mapoly0127s0040
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [K09699] 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]; [PF00364] Biotin-requiring enzyme; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain; [KOG0558] Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit); [2.3.1.168] Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase.

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0127s0040 [PTHR23151] DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED; [K09699] 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]; [PF00364] Biotin-requiring enzyme; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [PF00198] 2-oxoacid dehydrogenases acyltransferase (catalytic domain); [PF02817] e3 binding domain; [KOG0558] Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit); [2.3.1.168] Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase. 0.00 1.0000
1 Mapoly0055s0094 [K03522] electron transfer flavoprotein alpha subunit; [PTHR10909] ELECTRON TRANSPORT OXIDOREDUCTASE; [KOG3954] Electron transfer flavoprotein, alpha subunit; [PF01012] Electron transfer flavoprotein domain; [PF00766] Electron transfer flavoprotein FAD-binding domain1.410.8348
2 Mapoly0187s0016 [GO:0005524] ATP binding; [K01968] 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]; [GO:0016874] ligase activity; [6.4.1.4] Methylcrotonoyl-CoA carboxylase.; [PF02785] Biotin carboxylase C-terminal domain; [KOG0238] 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit; [PF00289] Carbamoyl-phosphate synthase L chain, N-terminal domain; [PF00364] Biotin-requiring enzyme; [GO:0008152] metabolic process; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE; [GO:0003824] catalytic activity; [PF02786] Carbamoyl-phosphate synthase L chain, ATP binding domain1.410.8389
3 Mapoly0004s0239 [PF07063] Domain of unknown function (DUF1338); [PTHR31136] FAMILY NOT NAMED2.450.8127
4 Mapoly0094s0055 [KOG0409] Predicted dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03446] NAD binding domain of 6-phosphogluconate dehydrogenase; [PF01116] Fructose-bisphosphate aldolase class-II; [K00120] glucose-fructose oxidoreductase [EC:1.1.99.28]; [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [GO:0005975] carbohydrate metabolic process; [GO:0008270] zinc ion binding; [GO:0004616] phosphogluconate dehydrogenase (decarboxylating) activity; [1.1.-.-] Acting on the CH-OH group of donors.; [GO:0051287] NAD binding; [PTHR22981:SF27] SUBFAMILY NOT NAMED; [PF07005] Protein of unknown function, DUF1537; [GO:0006098] pentose-phosphate shunt; [GO:0016832] aldehyde-lyase activity; [PF14833] NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase3.000.7457
5 Mapoly0115s0053 [KOG0725] Reductases with broad range of substrate specificities; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [K13606] chlorophyll(ide) b reductase [EC:1.1.1.294]; [PF00106] short chain dehydrogenase; [1.1.1.294] Chlorophyll(ide) b reductase.; [PTHR24314] FAMILY NOT NAMED4.000.7504
6 Mapoly0012s0124 [GO:0004174] electron-transferring-flavoprotein dehydrogenase activity; [PF13450] NAD(P)-binding Rossmann-like domain; [GO:0055114] oxidation-reduction process; [K00311] electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE; [1.5.5.1] Electron-transferring-flavoprotein dehydrogenase.; [PF05187] Electron transfer flavoprotein-ubiquinone oxidoreductase; [KOG2415] Electron transfer flavoprotein ubiquinone oxidoreductase5.480.7808
7 Mapoly0120s0035 [PF12937] F-box-like; [GO:0005515] protein binding; [PF00022] Actin; [PTHR11937] ACTIN; [KOG0676] Actin and related proteins5.920.7834
8 Mapoly0078s0002 [KOG1417] Homogentisate 1,2-dioxygenase; [GO:0055114] oxidation-reduction process; [PTHR11056:SF0] HOMOGENTISATE 1,2-DIOXYGENASE; [PTHR11056] HOMOGENTISATE 1,2-DIOXYGENASE; [GO:0006559] L-phenylalanine catabolic process; [PF04209] homogentisate 1,2-dioxygenase; [GO:0004411] homogentisate 1,2-dioxygenase activity; [GO:0006570] tyrosine metabolic process6.630.7838
9 Mapoly0053s0036 [PF00501] AMP-binding enzyme; [KOG1175] Acyl-CoA synthetase; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity6.710.7294
10 Mapoly0078s0036 [GO:0016020] membrane; [PTHR11827] SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG2082] K+/Cl- cotransporter KCC1 and related transporters; [PF00324] Amino acid permease7.000.6398
11 Mapoly0044s0097 [GO:0055114] oxidation-reduction process; [GO:0030091] protein repair; [PTHR10173] METHIONINE SULFOXIDE REDUCTASE; [GO:0006979] response to oxidative stress; [GO:0016671] oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; [GO:0008113] peptide-methionine (S)-S-oxide reductase activity; [PF01625] Peptide methionine sulfoxide reductase; [KOG1635] Peptide methionine sulfoxide reductase7.420.7434
12 Mapoly0024s0055 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [PF09192] Actin-fragmin kinase, catalytic; [KOG1718] Dual specificity phosphatase; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity9.170.6838
13 Mapoly0001s0130 [PTHR13914] PROLINE OXIDASE; [K00318] proline dehydrogenase [EC:1.5.99.8]; [GO:0004657] proline dehydrogenase activity; [KOG0186] Proline oxidase; [PTHR13914:SF0] SUBFAMILY NOT NAMED; [PF01619] Proline dehydrogenase; [GO:0006562] proline catabolic process; [1.5.99.8] Proline dehydrogenase.10.910.7195
14 Mapoly0009s0167 [PF12483] E3 Ubiquitin ligase; [KOG1571] Predicted E3 ubiquitin ligase; [GO:0004842] ubiquitin-protein ligase activity; [GO:0007005] mitochondrion organization; [PF13920] Zinc finger, C3HC4 type (RING finger); [PTHR12183] UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN11.220.7333
15 Mapoly0008s0179 [K00167] 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]; [PTHR11624] DEHYDROGENASE RELATED; [PTHR11624:SF21] BRANCHED CHAIN ALPHA KETO ACID DEHYDROGENASE E1 BETA SUBUNIT; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [GO:0003824] catalytic activity; [KOG0525] Branched chain alpha-keto acid dehydrogenase E1, beta subunit; [PF02780] Transketolase, C-terminal domain11.400.7444
16 Mapoly0161s0004 [K01376] cathepsin V [EC:3.4.22.43]; [GO:0008234] cysteine-type peptidase activity; [PF00396] Granulin; [3.4.22.-] Cysteine endopeptidases.; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis11.830.7054
17 Mapoly0046s0066 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [KOG0519] Sensory transduction histidine kinase; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity12.330.6107
18 Mapoly0009s0150 [PF01039] Carboxyl transferase domain; [GO:0016874] ligase activity; [6.4.1.4] Methylcrotonoyl-CoA carboxylase.; [K01969] 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]; [KOG0540] 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta; [PTHR22855] ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED; [PTHR22855:SF13] ACETYL-COA CARBOXYLASE CARBOXYLTRANSFERASE-RELATED12.490.7428
19 Mapoly0009s0090 [PTHR31509] FAMILY NOT NAMED12.690.7535
20 Mapoly0015s0203 -12.730.7172
21 Mapoly0001s0310 [KOG4621] Uncharacterized conserved protein; [PF09778] Guanylylate cyclase; [PTHR31400] FAMILY NOT NAMED13.750.7010
22 Mapoly0111s0005 [PF00168] C2 domain; [GO:0005515] protein binding14.460.7095
23 Mapoly0130s0027 -15.910.6979
24 Mapoly0122s0057 [2.4.1.13] Sucrose synthase.; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [GO:0016157] sucrose synthase activity; [KOG0853] Glycosyltransferase; [K00695] sucrose synthase [EC:2.4.1.13]; [PF00862] Sucrose synthase; [GO:0005985] sucrose metabolic process; [PTHR12526] GLYCOSYLTRANSFERASE; [PTHR12526:SF27] SUCROSE SYNTHASE16.430.6334
25 Mapoly0079s0072 [GO:0008270] zinc ion binding; [PF12428] Protein of unknown function (DUF3675); [PF12906] RING-variant domain; [PTHR23012] MEMBRANE ASSOCIATED RING FINGER17.660.6861
26 Mapoly0204s0006 -18.330.7215
27 Mapoly0029s0042 [GO:0006355] regulation of transcription, DNA-dependent; [PF00382] Transcription factor TFIIB repeat; [GO:0006352] DNA-dependent transcription, initiation; [K03124] transcription initiation factor TFIIB; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [PTHR11618:SF13] TRANSCRIPTION INITIATION FACTOR IIB; [KOG1597] Transcription initiation factor TFIIB; [GO:0017025] TBP-class protein binding18.710.6664
28 Mapoly0082s0063 [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [KOG0496] Beta-galactosidase; [GO:0005975] carbohydrate metabolic process; [PF02140] Galactose binding lectin domain; [GO:0030246] carbohydrate binding; [PTHR23421] BETA-GALACTOSIDASE RELATED; [PF01301] Glycosyl hydrolases family 3518.970.6918
29 Mapoly0117s0006 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED20.070.7353
30 Mapoly0016s0183 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0749] Mitochondrial ADP/ATP carrier proteins; [K05863] solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator)20.860.6785
31 Mapoly0130s0007 -20.880.5761
32 Mapoly0072s0023 [PTHR13128] FAMILY NOT NAMED; [KOG2760] Vacuolar sorting protein VPS36; [PF04157] EAP30/Vps36 family; [K12190] ESCRT-II complex subunit VPS3624.000.6206
33 Mapoly0033s0018 [K00207] dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2]; [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [1.3.1.2] Dihydropyrimidine dehydrogenase (NADP(+)).; [GO:0055114] oxidation-reduction process; [KOG1799] Dihydropyrimidine dehydrogenase; [PF01180] Dihydroorotate dehydrogenase; [GO:0004152] dihydroorotate dehydrogenase activity; [GO:0006222] UMP biosynthetic process24.150.6343
34 Mapoly0116s0002 [PTHR21290] SPHINGOMYELIN SYNTHETASE; [PF00536] SAM domain (Sterile alpha motif)24.370.6695
35 Mapoly0046s0012 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0010277] chlorophyllide a oxygenase [overall] activity; [GO:0055114] oxidation-reduction process; [PF08417] Pheophorbide a oxygenase; [PTHR21266] IRON-SULFUR DOMAIN CONTAINING PROTEIN; [GO:0016491] oxidoreductase activity; [1.14.12.20] Pheophorbide a oxygenase.; [PF00355] Rieske [2Fe-2S] domain; [K13071] pheophorbide a oxygenase [EC:1.14.12.20]26.530.6992
36 Mapoly0091s0016 [GO:0006914] autophagy; [KOG2751] Beclin-like protein; [PTHR12768] BECLIN 1; [PF04111] Autophagy protein Apg626.590.5824
37 Mapoly0014s0120 [GO:0055114] oxidation-reduction process; [KOG0022] Alcohol dehydrogenase, class III; [PTHR11695:SF280] ALCOHOL DEHYDROGENASE; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED27.930.6349
38 Mapoly0070s0086 [PF07748] Glycosyl hydrolases family 38 C-terminal domain; [3.2.1.24] Alpha-mannosidase.; [GO:0015923] mannosidase activity; [KOG1959] Glycosyl hydrolase, family 38 - alpha-mannosidase; [PTHR11607] ALPHA-MANNOSIDASE; [GO:0004559] alpha-mannosidase activity; [GO:0006013] mannose metabolic process; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [PF09261] Alpha mannosidase, middle domain; [GO:0005975] carbohydrate metabolic process; [GO:0008270] zinc ion binding; [PF01074] Glycosyl hydrolases family 38 N-terminal domain; [K01191] alpha-mannosidase [EC:3.2.1.24]28.910.6545
39 Mapoly0002s0284 [KOG0814] Glyoxylase; [PTHR11935] BETA LACTAMASE DOMAIN; [PF00753] Metallo-beta-lactamase superfamily; [PTHR11935:SF8] BETA LACTAMASE DOMAIN28.980.5495
40 Mapoly0052s0063 [GO:0016020] membrane; [GO:0003333] amino acid transmembrane transport; [K13868] solute carrier family 7 (L-type amino acid transporter), member 9; [PF13520] Amino acid permease; [PTHR11785] AMINO ACID TRANSPORTER; [KOG1287] Amino acid transporters; [GO:0015171] amino acid transmembrane transporter activity29.800.6608
41 Mapoly0027s0073 [K00166] 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]; [PF00676] Dehydrogenase E1 component; [PTHR11516] PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR); [GO:0008152] metabolic process; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [KOG1182] Branched chain alpha-keto acid dehydrogenase complex, alpha subunit; [PTHR11516:SF1] 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT-RELATED; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor30.000.6918
42 Mapoly0001s0505 [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat30.300.6861
43 Mapoly0027s0072 [PF13716] Divergent CRAL/TRIO domain; [KOG2633] Hismacro and SEC14 domain-containing proteins; [PTHR11106] GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED30.300.6691
44 Mapoly0038s0100 [PF12937] F-box-like; [PTHR20995] FAMILY NOT NAMED; [GO:0005515] protein binding32.400.6727
45 Mapoly0031s0179 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [KOG0202] Ca2+ transporting ATPase35.500.6493
46 Mapoly0011s0039 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase; [K08869] aarF domain-containing kinase36.220.6494
47 Mapoly0102s0004 -37.750.6267
48 Mapoly0042s0090 [1.11.1.15] Peroxiredoxin.; [GO:0055114] oxidation-reduction process; [GO:0016209] antioxidant activity; [K11188] peroxiredoxin 6, 1-Cys peroxiredoxin [EC:1.11.1.7 1.11.1.15 3.1.1.-]; [3.1.1.-] Carboxylic ester hydrolases.; [PTHR10681] THIOREDOXIN PEROXIDASE; [PF00578] AhpC/TSA family; [GO:0016491] oxidoreductase activity; [KOG0854] Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes; [1.11.1.7] Peroxidase.; [GO:0051920] peroxiredoxin activity; [PF10417] C-terminal domain of 1-Cys peroxiredoxin37.950.5613
49 Mapoly0130s0028 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED40.300.5667
50 Mapoly0075s0015 [PTHR14732:SF0] SUBFAMILY NOT NAMED; [PTHR14732] UNCHARACTERIZED; [PF04181] Rtr1/RPAP2 family40.310.5586
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